RNA–Protein interactions for RNA: ENST00000488918.2

ARHGEF39-204, Transcript of Rho guanine nucleotide exchange factor 39, humanhuman

TSL 5

Gene ARHGEF39, Length 347 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF39-204ENST00000488918 TMEM67Q5HYA8 995 aa13.09□□□□□ -0.31
ARHGEF39-204ENST00000488918 NSMFQ6X4W1 530 aa13.09□□□□□ -0.31
ARHGEF39-204ENST00000488918 CATIPQ7Z7H3 387 aa13.09□□□□□ -0.31
ARHGEF39-204ENST00000488918 MSL3Q8N5Y2 521 aaKnown RBP13.09□□□□□ -0.31
ARHGEF39-204ENST00000488918 ENAHQ8N8S7 591 aaPredicted RBP13.09□□□□□ -0.31
ARHGEF39-204ENST00000488918 ARRDC4Q8NCT1 418 aa13.09□□□□□ -0.31
ARHGEF39-204ENST00000488918 REPS2Q8NFH8 660 aa13.09□□□□□ -0.31
ARHGEF39-204ENST00000488918 MAP4K1Q92918 833 aa13.09□□□□□ -0.31
ARHGEF39-204ENST00000488918 AGBL1Q96MI9 1066 aa13.09□□□□□ -0.31
ARHGEF39-204ENST00000488918 TINF2Q9BSI4 451 aa13.09□□□□□ -0.31
ARHGEF39-204ENST00000488918 DDX20Q9UHI6 824 aaKnown RBP13.09□□□□□ -0.31
ARHGEF39-204ENST00000488918 NRBP1Q9UHY1 535 aa13.09□□□□□ -0.31
ARHGEF39-204ENST00000488918 TACC3Q9Y6A5 838 aa13.09□□□□□ -0.31
ARHGEF39-204ENST00000488918 MYH4Q9Y623 1939 aa13.08□□□□□ -0.32
ARHGEF39-204ENST00000488918 PTPDC1A2A3K4 754 aa13.08□□□□□ -0.32
ARHGEF39-204ENST00000488918 ASB14A6NK59 587 aa13.08□□□□□ -0.32
ARHGEF39-204ENST00000488918 KBTBD13C9JR72 458 aa13.08□□□□□ -0.32
ARHGEF39-204ENST00000488918 CYP21A2P08686 494 aa13.08□□□□□ -0.32
ARHGEF39-204ENST00000488918 GOLGA8HP0CJ92 632 aa13.08□□□□□ -0.32
ARHGEF39-204ENST00000488918 RARBP10826 455 aa13.08□□□□□ -0.32
ARHGEF39-204ENST00000488918 NOVP48745 357 aa13.08□□□□□ -0.32
ARHGEF39-204ENST00000488918 SNAP25P60880 206 aa13.08□□□□□ -0.32
ARHGEF39-204ENST00000488918 FGD1P98174 961 aa13.08□□□□□ -0.32
ARHGEF39-204ENST00000488918 TRAF1Q13077 416 aa13.08□□□□□ -0.32
ARHGEF39-204ENST00000488918 MAP3K21Q5TCX8 1036 aa13.08□□□□□ -0.32
ARHGEF39-204ENST00000488918 PRPF38BQ5VTL8 546 aaKnown RBP13.08□□□□□ -0.32
ARHGEF39-204ENST00000488918 SYNE3Q6ZMZ3 975 aa13.08□□□□□ -0.32
ARHGEF39-204ENST00000488918 NOL8Q76FK4 1167 aaKnown RBP13.08□□□□□ -0.32
ARHGEF39-204ENST00000488918 TMTC2Q8N394 836 aa13.08□□□□□ -0.32
ARHGEF39-204ENST00000488918 PAWRQ96IZ0 340 aaKnown RBP13.08□□□□□ -0.32
ARHGEF39-204ENST00000488918 C11orf49Q9H6J7 331 aa13.08□□□□□ -0.32
ARHGEF39-204ENST00000488918 FLRT1Q9NZU1 646 aa13.08□□□□□ -0.32
ARHGEF39-204ENST00000488918 RIPK3Q9Y572 518 aa13.08□□□□□ -0.32
ARHGEF39-204ENST00000488918 GREB1LQ9C091 1923 aaPredicted RBP13.07□□□□□ -0.32
ARHGEF39-204ENST00000488918 CCDC69A6NI79 296 aa13.07□□□□□ -0.32
ARHGEF39-204ENST00000488918 SEPT4O43236 478 aa13.07□□□□□ -0.32
ARHGEF39-204ENST00000488918 MCM5P33992 734 aa13.07□□□□□ -0.32
ARHGEF39-204ENST00000488918 TTBK2Q6IQ55 1244 aa13.07□□□□□ -0.32
ARHGEF39-204ENST00000488918 BTNL9Q6UXG8 535 aa13.07□□□□□ -0.32
ARHGEF39-204ENST00000488918 SHISA4Q96DD7 197 aa13.07□□□□□ -0.32
ARHGEF39-204ENST00000488918 CRISPLD2Q9H0B8 497 aa13.07□□□□□ -0.32
ARHGEF39-204ENST00000488918 IL25Q9H293 177 aa13.07□□□□□ -0.32
ARHGEF39-204ENST00000488918 RANBP17Q9H2T7 1088 aaKnown RBP13.07□□□□□ -0.32
ARHGEF39-204ENST00000488918 SPC25Q9HBM1 224 aa13.07□□□□□ -0.32
ARHGEF39-204ENST00000488918 VAT1LQ9HCJ6 419 aa13.07□□□□□ -0.32
ARHGEF39-204ENST00000488918 ADD3Q9UEY8 706 aaKnown RBP13.07□□□□□ -0.32
ARHGEF39-204ENST00000488918 ZHX1Q9UKY1 873 aaPredicted RBP13.07□□□□□ -0.32
ARHGEF39-204ENST00000488918 OGDHLQ9ULD0 1010 aa13.07□□□□□ -0.32
ARHGEF39-204ENST00000488918 REC8O95072 547 aa13.06□□□□□ -0.32
ARHGEF39-204ENST00000488918 CYBAP13498 195 aa13.06□□□□□ -0.32
ARHGEF39-204ENST00000488918 AKR1A1P14550 325 aa13.06□□□□□ -0.32
ARHGEF39-204ENST00000488918 KIF5BP33176 963 aa13.06□□□□□ -0.32
ARHGEF39-204ENST00000488918 ZNF792Q3KQV3 632 aa13.06□□□□□ -0.32
ARHGEF39-204ENST00000488918 USH1GQ495M9 461 aa13.06□□□□□ -0.32
ARHGEF39-204ENST00000488918 ZNF467Q7Z7K2 595 aaPredicted RBP13.06□□□□□ -0.32
ARHGEF39-204ENST00000488918 CTCFLQ8NI51 663 aaPredicted RBP13.06□□□□□ -0.32
ARHGEF39-204ENST00000488918 NUP133Q8WUM0 1156 aa13.06□□□□□ -0.32
ARHGEF39-204ENST00000488918 ANKS1AQ92625 1134 aa13.06□□□□□ -0.32
ARHGEF39-204ENST00000488918 UBA5Q9GZZ9 404 aa13.06□□□□□ -0.32
ARHGEF39-204ENST00000488918 FAM184BQ9ULE4 1060 aa13.06□□□□□ -0.32
ARHGEF39-204ENST00000488918 SYNGAP1Q96PV0 1343 aa13.06□□□□□ -0.32
ARHGEF39-204ENST00000488918 KRT32Q14532 448 aa13.05□□□□□ -0.32
ARHGEF39-204ENST00000488918 PRAMEF19Q5SWL8 479 aa13.05□□□□□ -0.32
ARHGEF39-204ENST00000488918 RASGRP2Q7LDG7 609 aa13.05□□□□□ -0.32
ARHGEF39-204ENST00000488918 CHST3Q7LGC8 479 aa13.05□□□□□ -0.32
ARHGEF39-204ENST00000488918 RNF180Q86T96 592 aa13.05□□□□□ -0.32
ARHGEF39-204ENST00000488918 MCF2L2Q86YR7 1114 aa13.05□□□□□ -0.32
ARHGEF39-204ENST00000488918 ABHD16BQ9H3Z7 469 aa13.05□□□□□ -0.32
ARHGEF39-204ENST00000488918 KLRF2D3W0D1 207 aa13.04□□□□□ -0.32
ARHGEF39-204ENST00000488918 SLC27A2O14975 620 aa13.04□□□□□ -0.32
ARHGEF39-204ENST00000488918 PRC1O43663 620 aa13.04□□□□□ -0.32
ARHGEF39-204ENST00000488918 CALM1P0DP23 149 aa13.04□□□□□ -0.32
ARHGEF39-204ENST00000488918 CALM2P0DP24 149 aa13.04□□□□□ -0.32
ARHGEF39-204ENST00000488918 CALM3P0DP25 149 aa13.04□□□□□ -0.32
ARHGEF39-204ENST00000488918 SNHG28P0DPA3 235 aa13.04□□□□□ -0.32
ARHGEF39-204ENST00000488918 CALML3P27482 149 aa13.04□□□□□ -0.32
ARHGEF39-204ENST00000488918 CDC37Q16543 378 aaPredicted RBP13.04□□□□□ -0.32
ARHGEF39-204ENST00000488918 ANO1Q5XXA6 986 aa13.04□□□□□ -0.32
ARHGEF39-204ENST00000488918 CREB3L3Q68CJ9 461 aa13.04□□□□□ -0.32
ARHGEF39-204ENST00000488918 RNF207Q6ZRF8 634 aa13.04□□□□□ -0.32
ARHGEF39-204ENST00000488918 CYB5R4Q7L1T6 521 aa13.04□□□□□ -0.32
ARHGEF39-204ENST00000488918 SKAP1Q86WV1 359 aa13.04□□□□□ -0.32
ARHGEF39-204ENST00000488918 FBXO11Q86XK2 927 aa13.04□□□□□ -0.32
ARHGEF39-204ENST00000488918 ADGRF4Q8IZF3 695 aa13.04□□□□□ -0.32
ARHGEF39-204ENST00000488918 TMEM87BQ96K49 555 aa13.04□□□□□ -0.32
ARHGEF39-204ENST00000488918 LSG1Q9H089 658 aaKnown RBP13.04□□□□□ -0.32
ARHGEF39-204ENST00000488918 A1CFQ9NQ94 594 aaKnown RBP13.04□□□□□ -0.32
ARHGEF39-204ENST00000488918 XPNPEP3Q9NQH7 507 aa13.04□□□□□ -0.32
ARHGEF39-204ENST00000488918 PRKAG2Q9UGJ0 569 aa13.04□□□□□ -0.32
ARHGEF39-204ENST00000488918 MRPL11Q9Y3B7 192 aaKnown RBP13.04□□□□□ -0.32
ARHGEF39-204ENST00000488918 A0A0G2JMZ2 1700 aa13.04□□□□□ -0.32
ARHGEF39-204ENST00000488918 RBBP6Q7Z6E9 1792 aaKnown RBP13.03□□□□□ -0.32
ARHGEF39-204ENST00000488918 DNM1LO00429 736 aa13.03□□□□□ -0.32
ARHGEF39-204ENST00000488918 EIF5BO60841 1220 aaKnown RBP13.03□□□□□ -0.32
ARHGEF39-204ENST00000488918 HMGB1P09429 215 aaKnown RBP13.03□□□□□ -0.32
ARHGEF39-204ENST00000488918 ACVR2BQ13705 512 aa13.03□□□□□ -0.32
ARHGEF39-204ENST00000488918 ARMCX2Q7L311 632 aa13.03□□□□□ -0.32
ARHGEF39-204ENST00000488918 CCDC144CPQ8IYA2 1237 aa13.03□□□□□ -0.32
ARHGEF39-204ENST00000488918 VTI1AQ96AJ9 217 aa13.03□□□□□ -0.32
ARHGEF39-204ENST00000488918 MTA3Q9BTC8 594 aa13.03□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms