RNA–Protein interactions for RNA: ENST00000488250.5

RAPGEF3-211, Transcript of Rap guanine nucleotide exchange factor 3, humanhuman

TSL 2

Gene RAPGEF3, Length 1,947 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF3-211ENST00000488250 KCND1Q9NSA2 647 aa18.12■□□□□ 0.49
RAPGEF3-211ENST00000488250 ZNF219Q9P2Y4 722 aaPredicted RBP18.12■□□□□ 0.49
RAPGEF3-211ENST00000488250 NFE2L3Q9Y4A8 694 aa18.12■□□□□ 0.49
RAPGEF3-211ENST00000488250 PCDHAC2Q9Y5I4 1007 aa18.12■□□□□ 0.49
RAPGEF3-211ENST00000488250 PSME4Q14997 1843 aa18.12■□□□□ 0.49
RAPGEF3-211ENST00000488250 DDTLA6NHG4 134 aaPredicted RBP18.11■□□□□ 0.49
RAPGEF3-211ENST00000488250 SKILP12757 684 aa18.11■□□□□ 0.49
RAPGEF3-211ENST00000488250 RBM5P52756 815 aaKnown RBP eCLIP18.11■□□□□ 0.49
RAPGEF3-211ENST00000488250 SEMA3FQ13275 785 aa18.11■□□□□ 0.49
RAPGEF3-211ENST00000488250 CUL4BQ13620 913 aa18.11■□□□□ 0.49
RAPGEF3-211ENST00000488250 DNTTIP2Q5QJE6 756 aaKnown RBP18.11■□□□□ 0.49
RAPGEF3-211ENST00000488250 TMC6Q7Z403 805 aa18.11■□□□□ 0.49
RAPGEF3-211ENST00000488250 MTRQ99707 1265 aa18.11■□□□□ 0.49
RAPGEF3-211ENST00000488250 KANSL2Q9H9L4 492 aa18.11■□□□□ 0.49
RAPGEF3-211ENST00000488250 DISC1Q9NRI5 854 aa18.11■□□□□ 0.49
RAPGEF3-211ENST00000488250 MYL1P05976 194 aa18.11■□□□□ 0.49
RAPGEF3-211ENST00000488250 OR52Z1P0C646 297 aa18.11■□□□□ 0.49
RAPGEF3-211ENST00000488250 ADCY7P51828 1080 aa18.11■□□□□ 0.49
RAPGEF3-211ENST00000488250 ADGRF4Q8IZF3 695 aa18.11■□□□□ 0.49
RAPGEF3-211ENST00000488250 GPCPD1Q9NPB8 672 aa18.11■□□□□ 0.49
RAPGEF3-211ENST00000488250 YDJCA8MPS7 323 aa18.1■□□□□ 0.49
RAPGEF3-211ENST00000488250 MPHOSPH10O00566 681 aaKnown RBP18.1■□□□□ 0.49
RAPGEF3-211ENST00000488250 PPIP5K2O43314 1243 aa18.1■□□□□ 0.49
RAPGEF3-211ENST00000488250 CACNB3P54284 484 aa18.1■□□□□ 0.49
RAPGEF3-211ENST00000488250 CERKLQ49MI3 558 aaPredicted RBP18.1■□□□□ 0.49
RAPGEF3-211ENST00000488250 DEFB132Q7Z7B7 95 aa18.1■□□□□ 0.49
RAPGEF3-211ENST00000488250 VSTM4Q8IW00 320 aa18.1■□□□□ 0.49
RAPGEF3-211ENST00000488250 DPF2Q92785 391 aa18.1■□□□□ 0.49
RAPGEF3-211ENST00000488250 RMND1Q9NWS8 449 aa18.1■□□□□ 0.49
RAPGEF3-211ENST00000488250 MYH4Q9Y623 1939 aa18.1■□□□□ 0.49
RAPGEF3-211ENST00000488250 PPP1R3GB7ZBB8 358 aa18.1■□□□□ 0.49
RAPGEF3-211ENST00000488250 STAT6P42226 847 aa18.1■□□□□ 0.49
RAPGEF3-211ENST00000488250 KCNJ6P48051 423 aa18.1■□□□□ 0.49
RAPGEF3-211ENST00000488250 TCP10Q12799 353 aa18.1■□□□□ 0.49
RAPGEF3-211ENST00000488250 CFAP100Q494V2 611 aa18.1■□□□□ 0.49
RAPGEF3-211ENST00000488250 SPATA1Q5VX52 437 aa18.1■□□□□ 0.49
RAPGEF3-211ENST00000488250 ARMCX5Q6P1M9 558 aa18.1■□□□□ 0.49
RAPGEF3-211ENST00000488250 RTKN2Q8IZC4 609 aa18.1■□□□□ 0.49
RAPGEF3-211ENST00000488250 TBCKQ8TEA7 893 aa18.1■□□□□ 0.49
RAPGEF3-211ENST00000488250 DCAF4Q8WV16 495 aa18.1■□□□□ 0.49
RAPGEF3-211ENST00000488250 PSMD1Q99460 953 aa18.1■□□□□ 0.49
RAPGEF3-211ENST00000488250 CUEDC2Q9H467 287 aa18.1■□□□□ 0.49
RAPGEF3-211ENST00000488250 MAGEF1Q9HAY2 307 aa18.1■□□□□ 0.49
RAPGEF3-211ENST00000488250 RIC8AQ9NPQ8 531 aa18.1■□□□□ 0.49
RAPGEF3-211ENST00000488250 CCNT1O60563 726 aaKnown RBP18.09■□□□□ 0.49
RAPGEF3-211ENST00000488250 CD44P16070 742 aaKnown RBP18.09■□□□□ 0.49
RAPGEF3-211ENST00000488250 CASP1P29466 404 aa18.09■□□□□ 0.49
RAPGEF3-211ENST00000488250 UBA7P41226 1012 aa18.09■□□□□ 0.49
RAPGEF3-211ENST00000488250 KARSQ15046 597 aaKnown RBP18.09■□□□□ 0.49
RAPGEF3-211ENST00000488250 LETM2Q2VYF4 491 aa18.09■□□□□ 0.49
RAPGEF3-211ENST00000488250 CCDC93Q567U6 631 aa18.09■□□□□ 0.49
RAPGEF3-211ENST00000488250 NAALADL2Q58DX5 795 aa18.09■□□□□ 0.49
RAPGEF3-211ENST00000488250 TMEM179Q6ZVK1 233 aa18.09■□□□□ 0.49
RAPGEF3-211ENST00000488250 TTLL6Q8N841 843 aa18.09■□□□□ 0.49
RAPGEF3-211ENST00000488250 ZBTB5O15062 677 aa18.08■□□□□ 0.49
RAPGEF3-211ENST00000488250 C21orf2O43822 256 aa18.08■□□□□ 0.49
RAPGEF3-211ENST00000488250 SFPQP23246 707 aaKnown RBP eCLIP18.08■□□□□ 0.49
RAPGEF3-211ENST00000488250 RRAGBQ5VZM2 374 aa18.08■□□□□ 0.49
RAPGEF3-211ENST00000488250 COA7Q96BR5 231 aa18.08■□□□□ 0.49
RAPGEF3-211ENST00000488250 BIN2Q9UBW5 565 aaPredicted RBP18.08■□□□□ 0.49
RAPGEF3-211ENST00000488250 PPP1R11O60927 126 aaPredicted RBP18.08■□□□□ 0.48
RAPGEF3-211ENST00000488250 EEF2P13639 858 aaKnown RBP18.08■□□□□ 0.48
RAPGEF3-211ENST00000488250 CDC25AP30304 524 aa18.08■□□□□ 0.48
RAPGEF3-211ENST00000488250 CLK2P49760 499 aaKnown RBP18.08■□□□□ 0.48
RAPGEF3-211ENST00000488250 JAKMIP3Q5VZ66 844 aa18.08■□□□□ 0.48
RAPGEF3-211ENST00000488250 TTBK2Q6IQ55 1244 aa18.08■□□□□ 0.48
RAPGEF3-211ENST00000488250 TRMT44Q8IYL2 757 aaKnown RBP18.08■□□□□ 0.48
RAPGEF3-211ENST00000488250 TRIM34Q9BYJ4 488 aa18.08■□□□□ 0.48
RAPGEF3-211ENST00000488250 VPS33BQ9H267 617 aa18.08■□□□□ 0.48
RAPGEF3-211ENST00000488250 INTS13Q9NVM9 706 aa18.08■□□□□ 0.48
RAPGEF3-211ENST00000488250 KBTBD4Q9NVX7 518 aa18.08■□□□□ 0.48
RAPGEF3-211ENST00000488250 SYNRGQ9UMZ2 1314 aa18.08■□□□□ 0.48
RAPGEF3-211ENST00000488250 CCDC96Q2M329 555 aa18.07■□□□□ 0.48
RAPGEF3-211ENST00000488250 ZNF658Q5TYW1 1059 aaPredicted RBP18.07■□□□□ 0.48
RAPGEF3-211ENST00000488250 ZSCAN29Q8IWY8 852 aaPredicted RBP18.07■□□□□ 0.48
RAPGEF3-211ENST00000488250 SLC16A10Q8TF71 515 aa18.07■□□□□ 0.48
RAPGEF3-211ENST00000488250 MTMR9Q96QG7 549 aa18.07■□□□□ 0.48
RAPGEF3-211ENST00000488250 GLT8D2Q9H1C3 349 aa18.07■□□□□ 0.48
RAPGEF3-211ENST00000488250 SYNPO2Q9UMS6 1093 aa18.07■□□□□ 0.48
RAPGEF3-211ENST00000488250 RPN1P04843 607 aaKnown RBP18.06■□□□□ 0.48
RAPGEF3-211ENST00000488250 SLURP2P0DP57 97 aa18.06■□□□□ 0.48
RAPGEF3-211ENST00000488250 CDK11BP21127 795 aaKnown RBP18.06■□□□□ 0.48
RAPGEF3-211ENST00000488250 ATP2B2Q01814 1243 aa18.06■□□□□ 0.48
RAPGEF3-211ENST00000488250 KCNB1Q14721 858 aa18.06■□□□□ 0.48
RAPGEF3-211ENST00000488250 CDKAL1Q5VV42 579 aa18.06■□□□□ 0.48
RAPGEF3-211ENST00000488250 RSBN1LQ6PCB5 846 aaPredicted RBP18.06■□□□□ 0.48
RAPGEF3-211ENST00000488250 SIAH1Q8IUQ4 282 aa18.06■□□□□ 0.48
RAPGEF3-211ENST00000488250 IGSF22Q8N9C0 903 aa18.06■□□□□ 0.48
RAPGEF3-211ENST00000488250 GMCL1P1Q8NEA9 526 aa18.06■□□□□ 0.48
RAPGEF3-211ENST00000488250 STAMQ92783 540 aa18.06■□□□□ 0.48
RAPGEF3-211ENST00000488250 UPF1Q92900 1129 aaKnown RBP eCLIP18.06■□□□□ 0.48
RAPGEF3-211ENST00000488250 PRMT6Q96LA8 375 aaPredicted RBP18.06■□□□□ 0.48
RAPGEF3-211ENST00000488250 BLZF1Q9H2G9 400 aa18.06■□□□□ 0.48
RAPGEF3-211ENST00000488250 TDRD3Q9H7E2 651 aaKnown RBP18.06■□□□□ 0.48
RAPGEF3-211ENST00000488250 TMEM260Q9NX78 707 aa18.06■□□□□ 0.48
RAPGEF3-211ENST00000488250 PP2D1A8MPX8 630 aa18.06■□□□□ 0.48
RAPGEF3-211ENST00000488250 NRDCO43847 1150 aa18.06■□□□□ 0.48
RAPGEF3-211ENST00000488250 MRPL12P52815 198 aaKnown RBP18.06■□□□□ 0.48
RAPGEF3-211ENST00000488250 KCTD1Q719H9 257 aa18.06■□□□□ 0.48
RAPGEF3-211ENST00000488250 CCDC112Q8NEF3 446 aa18.06■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms