RNA–Protein interactions for RNA: ENST00000488217.1

TRIM50-203, Transcript of tripartite motif containing 50, humanhuman

TSL 2

Gene TRIM50, Length 548 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM50-203ENST00000488217 DDX52Q9Y2R4 599 aaKnown RBP eCLIP18.16■□□□□ 0.5
TRIM50-203ENST00000488217 ZNF236Q9UL36 1845 aa18.15■□□□□ 0.5
TRIM50-203ENST00000488217 MOXD2PA6NHM9 499 aa18.15■□□□□ 0.5
TRIM50-203ENST00000488217 RANBP6O60518 1105 aaKnown RBP18.15■□□□□ 0.5
TRIM50-203ENST00000488217 PQBP1O60828 265 aaKnown RBP18.15■□□□□ 0.5
TRIM50-203ENST00000488217 ITGB8P26012 769 aa18.15■□□□□ 0.5
TRIM50-203ENST00000488217 PDE1AP54750 535 aa18.15■□□□□ 0.5
TRIM50-203ENST00000488217 IKQ13123 557 aaPredicted RBP18.15■□□□□ 0.5
TRIM50-203ENST00000488217 HDAC1Q13547 482 aaPredicted RBP18.15■□□□□ 0.5
TRIM50-203ENST00000488217 ALX1Q15699 326 aa18.15■□□□□ 0.5
TRIM50-203ENST00000488217 CCDC144BQ3MJ40 725 aa18.15■□□□□ 0.5
TRIM50-203ENST00000488217 VPS53Q5VIR6 699 aa18.15■□□□□ 0.5
TRIM50-203ENST00000488217 ANKRD33Q7Z3H0 272 aa18.15■□□□□ 0.5
TRIM50-203ENST00000488217 FGD4Q96M96 766 aa18.15■□□□□ 0.5
TRIM50-203ENST00000488217 CRBNQ96SW2 442 aa18.15■□□□□ 0.5
TRIM50-203ENST00000488217 SPC25Q9HBM1 224 aa18.15■□□□□ 0.5
TRIM50-203ENST00000488217 STARD7Q9NQZ5 370 aa18.15■□□□□ 0.5
TRIM50-203ENST00000488217 HOMER2Q9NSB8 354 aa18.15■□□□□ 0.5
TRIM50-203ENST00000488217 A0A0G2JMZ2 1700 aa18.15■□□□□ 0.5
TRIM50-203ENST00000488217 DCDC2CA8MYV0 355 aa18.14■□□□□ 0.49
TRIM50-203ENST00000488217 NMT2O60551 498 aa18.14■□□□□ 0.49
TRIM50-203ENST00000488217 FGRP09769 529 aa18.14■□□□□ 0.49
TRIM50-203ENST00000488217 RAG1P15918 1043 aa18.14■□□□□ 0.49
TRIM50-203ENST00000488217 CNTN2Q02246 1040 aa18.14■□□□□ 0.49
TRIM50-203ENST00000488217 FAAP100Q0VG06 881 aa18.14■□□□□ 0.49
TRIM50-203ENST00000488217 TKFCQ3LXA3 575 aa18.14■□□□□ 0.49
TRIM50-203ENST00000488217 KCTD1Q719H9 257 aa18.14■□□□□ 0.49
TRIM50-203ENST00000488217 ARMCX2Q7L311 632 aa18.14■□□□□ 0.49
TRIM50-203ENST00000488217 TICAM2Q86XR7 235 aa18.14■□□□□ 0.49
TRIM50-203ENST00000488217 CCDC144CPQ8IYA2 1237 aa18.14■□□□□ 0.49
TRIM50-203ENST00000488217 FAM133AQ8N9E0 248 aa18.14■□□□□ 0.49
TRIM50-203ENST00000488217 PCSK9Q8NBP7 692 aaKnown RBP18.14■□□□□ 0.49
TRIM50-203ENST00000488217 VTI1AQ96AJ9 217 aa18.14■□□□□ 0.49
TRIM50-203ENST00000488217 TRERF1Q96PN7 1200 aa18.14■□□□□ 0.49
TRIM50-203ENST00000488217 ACAD9Q9H845 621 aa18.14■□□□□ 0.49
TRIM50-203ENST00000488217 ZNF536O15090 1300 aa18.14■□□□□ 0.49
TRIM50-203ENST00000488217 SYNRGQ9UMZ2 1314 aa18.14■□□□□ 0.49
TRIM50-203ENST00000488217 PLIN4Q96Q06 1357 aa18.14■□□□□ 0.49
TRIM50-203ENST00000488217 FGAP02671 866 aa18.13■□□□□ 0.49
TRIM50-203ENST00000488217 C6orf222P0C671 652 aaPredicted RBP18.13■□□□□ 0.49
TRIM50-203ENST00000488217 NOVP48745 357 aa18.13■□□□□ 0.49
TRIM50-203ENST00000488217 GJA9P57773 515 aa18.13■□□□□ 0.49
TRIM50-203ENST00000488217 MCMDC2Q4G0Z9 681 aa18.13■□□□□ 0.49
TRIM50-203ENST00000488217 GNASQ5JWF2 1037 aa18.13■□□□□ 0.49
TRIM50-203ENST00000488217 GLT1D1Q96MS3 346 aa18.13■□□□□ 0.49
TRIM50-203ENST00000488217 ELP1O95163 1332 aa18.13■□□□□ 0.49
TRIM50-203ENST00000488217 MYADML2A6NDP7 307 aa18.12■□□□□ 0.49
TRIM50-203ENST00000488217 SOWAHBA6NEL2 793 aa18.12■□□□□ 0.49
TRIM50-203ENST00000488217 ORC4O43929 436 aa18.12■□□□□ 0.49
TRIM50-203ENST00000488217 ALAS1P13196 640 aa18.12■□□□□ 0.49
TRIM50-203ENST00000488217 CDK7P50613 346 aa18.12■□□□□ 0.49
TRIM50-203ENST00000488217 SNAP25P60880 206 aa18.12■□□□□ 0.49
TRIM50-203ENST00000488217 FAM161BQ96MY7 647 aa18.12■□□□□ 0.49
TRIM50-203ENST00000488217 GUCD1Q96NT3 240 aa18.12■□□□□ 0.49
TRIM50-203ENST00000488217 KATNBL1Q9H079 304 aa18.12■□□□□ 0.49
TRIM50-203ENST00000488217 SEMA6BQ9H3T3 888 aa18.12■□□□□ 0.49
TRIM50-203ENST00000488217 A1CFQ9NQ94 594 aaKnown RBP18.12■□□□□ 0.49
TRIM50-203ENST00000488217 RNF146Q9NTX7 359 aa18.12■□□□□ 0.49
TRIM50-203ENST00000488217 PRR12Q9ULL5 1215 aa18.12■□□□□ 0.49
TRIM50-203ENST00000488217 ASB14A6NK59 587 aa18.11■□□□□ 0.49
TRIM50-203ENST00000488217 ADCY6O43306 1168 aa18.11■□□□□ 0.49
TRIM50-203ENST00000488217 ASGR1P07306 291 aa18.11■□□□□ 0.49
TRIM50-203ENST00000488217 CST5P28325 142 aaPredicted RBP18.11■□□□□ 0.49
TRIM50-203ENST00000488217 EPHB4P54760 987 aa18.11■□□□□ 0.49
TRIM50-203ENST00000488217 IRX5P78411 483 aaPredicted RBP18.11■□□□□ 0.49
TRIM50-203ENST00000488217 SMAD3P84022 425 aaKnown RBP18.11■□□□□ 0.49
TRIM50-203ENST00000488217 ZNF697Q5TEC3 545 aa18.11■□□□□ 0.49
TRIM50-203ENST00000488217 CCDC174Q6PII3 467 aa18.11■□□□□ 0.49
TRIM50-203ENST00000488217 FAM227BQ96M60 508 aa18.11■□□□□ 0.49
TRIM50-203ENST00000488217 UPF3AQ9H1J1 476 aaKnown RBP18.11■□□□□ 0.49
TRIM50-203ENST00000488217 TIMP1P01033 207 aa18.1■□□□□ 0.49
TRIM50-203ENST00000488217 NKX3-2P78367 333 aa18.1■□□□□ 0.49
TRIM50-203ENST00000488217 TNFAIP2Q03169 654 aa18.1■□□□□ 0.49
TRIM50-203ENST00000488217 NOL8Q76FK4 1167 aaKnown RBP18.1■□□□□ 0.49
TRIM50-203ENST00000488217 DCAF4Q8WV16 495 aa18.1■□□□□ 0.49
TRIM50-203ENST00000488217 TOMM22Q9NS69 142 aa18.1■□□□□ 0.49
TRIM50-203ENST00000488217 TCP11L1Q9NUJ3 509 aa18.1■□□□□ 0.49
TRIM50-203ENST00000488217 MTMR7Q9Y216 660 aa18.1■□□□□ 0.49
TRIM50-203ENST00000488217 ARVCFO00192 962 aa18.09■□□□□ 0.49
TRIM50-203ENST00000488217 HSPD1P10809 573 aaKnown RBP18.09■□□□□ 0.49
TRIM50-203ENST00000488217 FPGSQ05932 587 aa18.09■□□□□ 0.49
TRIM50-203ENST00000488217 IQSEC1Q6DN90 963 aa18.09■□□□□ 0.49
TRIM50-203ENST00000488217 MROH7Q68CQ1 1323 aa18.08■□□□□ 0.49
TRIM50-203ENST00000488217 CTAGE5O15320 804 aa18.08■□□□□ 0.48
TRIM50-203ENST00000488217 TOP1P11387 765 aaKnown RBP18.08■□□□□ 0.48
TRIM50-203ENST00000488217 AAMPQ13685 434 aa18.08■□□□□ 0.48
TRIM50-203ENST00000488217 MUM1L1Q5H9M0 696 aa18.08■□□□□ 0.48
TRIM50-203ENST00000488217 RRP12Q5JTH9 1297 aaKnown RBP18.08■□□□□ 0.48
TRIM50-203ENST00000488217 TTBK2Q6IQ55 1244 aa18.08■□□□□ 0.48
TRIM50-203ENST00000488217 BTNL9Q6UXG8 535 aa18.08■□□□□ 0.48
TRIM50-203ENST00000488217 RNPC3Q96LT9 517 aaKnown RBP18.08■□□□□ 0.48
TRIM50-203ENST00000488217 TTC14Q96N46 770 aa18.08■□□□□ 0.48
TRIM50-203ENST00000488217 CDX2Q99626 313 aaPredicted RBP18.08■□□□□ 0.48
TRIM50-203ENST00000488217 TMEM47Q9BQJ4 181 aa18.08■□□□□ 0.48
TRIM50-203ENST00000488217 CYP39A1Q9NYL5 469 aa18.08■□□□□ 0.48
TRIM50-203ENST00000488217 CCPG1Q9ULG6 757 aa18.08■□□□□ 0.48
TRIM50-203ENST00000488217 SMCHD1A6NHR9 2005 aa18.08■□□□□ 0.48
TRIM50-203ENST00000488217 A0A0D9SFI3 127 aa18.07■□□□□ 0.48
TRIM50-203ENST00000488217 C11orf97A0A1B0GVM6 126 aaPredicted RBP18.07■□□□□ 0.48
TRIM50-203ENST00000488217 TRIM6-TRIM34B2RNG4 842 aa18.07■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms