RNA–Protein interactions for RNA: ENST00000488106.1

RHBDD3-205, Transcript of rhomboid domain containing 3, humanhuman

TSL 5

Gene RHBDD3, Length 640 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDD3-205ENST00000488106 ANKS1AQ92625 1134 aa27.76■■■□□ 2.03
RHBDD3-205ENST00000488106 AGBL1Q96MI9 1066 aa27.76■■■□□ 2.03
RHBDD3-205ENST00000488106 ZNF536O15090 1300 aa27.75■■■□□ 2.03
RHBDD3-205ENST00000488106 SNHG28P0DPA3 235 aa27.75■■■□□ 2.03
RHBDD3-205ENST00000488106 CCND3P30281 292 aaPredicted RBP27.75■■■□□ 2.03
RHBDD3-205ENST00000488106 CYP2C19P33261 490 aa27.75■■■□□ 2.03
RHBDD3-205ENST00000488106 SLC27A2O14975 620 aa27.74■■■□□ 2.03
RHBDD3-205ENST00000488106 SGPL1O95470 568 aa27.74■■■□□ 2.03
RHBDD3-205ENST00000488106 TAL1P17542 331 aaPredicted RBP27.74■■■□□ 2.03
RHBDD3-205ENST00000488106 BTNL9Q6UXG8 535 aa27.74■■■□□ 2.03
RHBDD3-205ENST00000488106 CHST3Q7LGC8 479 aa27.74■■■□□ 2.03
RHBDD3-205ENST00000488106 CEP290O15078 2479 aa27.74■■■□□ 2.03
RHBDD3-205ENST00000488106 LRRC37A2A6NM11 1700 aa27.73■■■□□ 2.03
RHBDD3-205ENST00000488106 SEC23AQ15436 765 aa27.73■■■□□ 2.03
RHBDD3-205ENST00000488106 OLFML2BQ68BL8 750 aa27.73■■■□□ 2.03
RHBDD3-205ENST00000488106 CREB3L3Q68CJ9 461 aa27.73■■■□□ 2.03
RHBDD3-205ENST00000488106 MAML3Q96JK9 1138 aa27.73■■■□□ 2.03
RHBDD3-205ENST00000488106 RANBP17Q9H2T7 1088 aaKnown RBP27.73■■■□□ 2.03
RHBDD3-205ENST00000488106 RNF146Q9NTX7 359 aa27.73■■■□□ 2.03
RHBDD3-205ENST00000488106 IFIT3O14879 490 aaKnown RBP27.72■■■□□ 2.03
RHBDD3-205ENST00000488106 TFRCP02786 760 aaKnown RBP27.72■■■□□ 2.03
RHBDD3-205ENST00000488106 ALAS1P13196 640 aa27.72■■■□□ 2.03
RHBDD3-205ENST00000488106 GPATCH4Q5T3I0 446 aaKnown RBP27.72■■■□□ 2.03
RHBDD3-205ENST00000488106 MB21D2Q8IYB1 491 aaPredicted RBP27.72■■■□□ 2.03
RHBDD3-205ENST00000488106 CHST13Q8NET6 341 aa27.72■■■□□ 2.03
RHBDD3-205ENST00000488106 DDX11Q96FC9 970 aa27.72■■■□□ 2.03
RHBDD3-205ENST00000488106 CPVLQ9H3G5 476 aa27.72■■■□□ 2.03
RHBDD3-205ENST00000488106 FBXO40Q9UH90 709 aa27.72■■■□□ 2.03
RHBDD3-205ENST00000488106 CCPG1Q9ULG6 757 aa27.72■■■□□ 2.03
RHBDD3-205ENST00000488106 ERICH2A1L162 156 aa27.71■■■□□ 2.03
RHBDD3-205ENST00000488106 ANKRD35Q8N283 1001 aa27.71■■■□□ 2.03
RHBDD3-205ENST00000488106 ACAD9Q9H845 621 aa27.71■■■□□ 2.03
RHBDD3-205ENST00000488106 SART3Q15020 963 aaKnown RBP27.7■■■□□ 2.02
RHBDD3-205ENST00000488106 NECTIN1Q15223 517 aa27.7■■■□□ 2.02
RHBDD3-205ENST00000488106 ZNF792Q3KQV3 632 aa27.7■■■□□ 2.02
RHBDD3-205ENST00000488106 CRISPLD2Q9H0B8 497 aa27.7■■■□□ 2.02
RHBDD3-205ENST00000488106 FARP2O94887 1054 aaPredicted RBP27.69■■■□□ 2.02
RHBDD3-205ENST00000488106 ICAM1P05362 532 aa27.69■■■□□ 2.02
RHBDD3-205ENST00000488106 PARP1P09874 1014 aaKnown RBP27.69■■■□□ 2.02
RHBDD3-205ENST00000488106 CNGA1P29973 690 aa27.69■■■□□ 2.02
RHBDD3-205ENST00000488106 ANTXR2P58335 489 aa27.69■■■□□ 2.02
RHBDD3-205ENST00000488106 WTAPQ15007 396 aa27.69■■■□□ 2.02
RHBDD3-205ENST00000488106 ASPRV1Q53RT3 343 aa27.69■■■□□ 2.02
RHBDD3-205ENST00000488106 TRERF1Q96PN7 1200 aa27.69■■■□□ 2.02
RHBDD3-205ENST00000488106 UBA5Q9GZZ9 404 aa27.69■■■□□ 2.02
RHBDD3-205ENST00000488106 SENP2Q9HC62 589 aa27.69■■■□□ 2.02
RHBDD3-205ENST00000488106 IGHA2P01877 340 aa27.68■■■□□ 2.02
RHBDD3-205ENST00000488106 CYBAP13498 195 aa27.68■■■□□ 2.02
RHBDD3-205ENST00000488106 TKFCQ3LXA3 575 aa27.68■■■□□ 2.02
RHBDD3-205ENST00000488106 TMEM67Q5HYA8 995 aa27.68■■■□□ 2.02
RHBDD3-205ENST00000488106 TRPV1Q8NER1 839 aa27.68■■■□□ 2.02
RHBDD3-205ENST00000488106 MUM1L1Q5H9M0 696 aa27.67■■■□□ 2.02
RHBDD3-205ENST00000488106 RNF20Q5VTR2 975 aa27.67■■■□□ 2.02
RHBDD3-205ENST00000488106 DHX30Q7L2E3 1194 aaKnown RBP eCLIP27.67■■■□□ 2.02
RHBDD3-205ENST00000488106 DIS3Q9Y2L1 958 aaKnown RBP27.67■■■□□ 2.02
RHBDD3-205ENST00000488106 DNAJC25-GNG10A0A024R161 153 aa27.66■■■□□ 2.02
RHBDD3-205ENST00000488106 DHX16O60231 1041 aaKnown RBP27.66■■■□□ 2.02
RHBDD3-205ENST00000488106 TINF2Q9BSI4 451 aa27.66■■■□□ 2.02
RHBDD3-205ENST00000488106 A1CFQ9NQ94 594 aaKnown RBP27.66■■■□□ 2.02
RHBDD3-205ENST00000488106 PRC1O43663 620 aa27.65■■■□□ 2.02
RHBDD3-205ENST00000488106 COL9A3Q14050 684 aaPredicted RBP27.65■■■□□ 2.02
RHBDD3-205ENST00000488106 PRAMEF19Q5SWL8 479 aa27.65■■■□□ 2.02
RHBDD3-205ENST00000488106 DNAH12Q6ZR08 3092 aa27.65■■■□□ 2.02
RHBDD3-205ENST00000488106 MCM5P33992 734 aa27.64■■■□□ 2.02
RHBDD3-205ENST00000488106 CDC37Q16543 378 aaPredicted RBP27.64■■■□□ 2.02
RHBDD3-205ENST00000488106 ADGRF4Q8IZF3 695 aa27.64■■■□□ 2.02
RHBDD3-205ENST00000488106 STAG2Q8N3U4 1231 aa27.64■■■□□ 2.02
RHBDD3-205ENST00000488106 DIS3LQ8TF46 1054 aaKnown RBP27.64■■■□□ 2.02
RHBDD3-205ENST00000488106 GPHNQ9NQX3 736 aaPredicted RBP27.64■■■□□ 2.02
RHBDD3-205ENST00000488106 DDX20Q9UHI6 824 aaKnown RBP27.64■■■□□ 2.02
RHBDD3-205ENST00000488106 PFASO15067 1338 aa27.64■■■□□ 2.01
RHBDD3-205ENST00000488106 NSMFQ6X4W1 530 aa27.63■■■□□ 2.01
RHBDD3-205ENST00000488106 UBE2Q1Q7Z7E8 422 aa27.63■■■□□ 2.01
RHBDD3-205ENST00000488106 IGDCC4Q8TDY8 1250 aa27.63■■■□□ 2.01
RHBDD3-205ENST00000488106 OGDHLQ9ULD0 1010 aa27.63■■■□□ 2.01
RHBDD3-205ENST00000488106 POTEB2H3BUK9 544 aa27.62■■■□□ 2.01
RHBDD3-205ENST00000488106 CNTN2Q02246 1040 aa27.62■■■□□ 2.01
RHBDD3-205ENST00000488106 USH1GQ495M9 461 aa27.62■■■□□ 2.01
RHBDD3-205ENST00000488106 LHX8Q68G74 356 aa27.62■■■□□ 2.01
RHBDD3-205ENST00000488106 FGD4Q96M96 766 aa27.62■■■□□ 2.01
RHBDD3-205ENST00000488106 LY9Q9HBG7 655 aa27.62■■■□□ 2.01
RHBDD3-205ENST00000488106 VAT1LQ9HCJ6 419 aa27.62■■■□□ 2.01
RHBDD3-205ENST00000488106 MAD2L2Q9UI95 211 aa27.62■■■□□ 2.01
RHBDD3-205ENST00000488106 WDR19Q8NEZ3 1342 aa27.62■■■□□ 2.01
RHBDD3-205ENST00000488106 NFIBO00712 420 aa27.61■■■□□ 2.01
RHBDD3-205ENST00000488106 CAPN2P17655 700 aa27.61■■■□□ 2.01
RHBDD3-205ENST00000488106 GRM4Q14833 912 aa27.61■■■□□ 2.01
RHBDD3-205ENST00000488106 ANO1Q5XXA6 986 aa27.61■■■□□ 2.01
RHBDD3-205ENST00000488106 CATIPQ7Z7H3 387 aa27.61■■■□□ 2.01
RHBDD3-205ENST00000488106 KLRF2D3W0D1 207 aa27.6■■■□□ 2.01
RHBDD3-205ENST00000488106 RASEFQ8IZ41 740 aa27.6■■■□□ 2.01
RHBDD3-205ENST00000488106 ANKLE1Q8NAG6 615 aa27.6■■■□□ 2.01
RHBDD3-205ENST00000488106 NUP133Q8WUM0 1156 aa27.6■■■□□ 2.01
RHBDD3-205ENST00000488106 PAWRQ96IZ0 340 aaKnown RBP27.6■■■□□ 2.01
RHBDD3-205ENST00000488106 LRRC2Q9BYS8 371 aa27.6■■■□□ 2.01
RHBDD3-205ENST00000488106 CYP39A1Q9NYL5 469 aa27.6■■■□□ 2.01
RHBDD3-205ENST00000488106 SYNGAP1Q96PV0 1343 aa27.6■■■□□ 2.01
RHBDD3-205ENST00000488106 SH2B2O14492 632 aaPredicted RBP27.59■■■□□ 2.01
RHBDD3-205ENST00000488106 SEPT4O43236 478 aa27.59■■■□□ 2.01
RHBDD3-205ENST00000488106 MSCO60682 206 aa27.59■■■□□ 2.01
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms