RNA–Protein interactions for RNA: ENST00000488065.1

PITRM1-210, Transcript of pitrilysin metallopeptidase 1, humanhuman

TSL 5

Gene PITRM1, Length 851 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PITRM1-210ENST00000488065 PRRT2Q7Z6L0 340 aaPredicted RBP11.86□□□□□ -0.51
PITRM1-210ENST00000488065 FANCBQ8NB91 859 aa11.86□□□□□ -0.51
PITRM1-210ENST00000488065 SNX21Q969T3 373 aa11.86□□□□□ -0.51
PITRM1-210ENST00000488065 GMCL1Q96IK5 515 aa11.86□□□□□ -0.51
PITRM1-210ENST00000488065 MAP3K14Q99558 947 aa11.86□□□□□ -0.51
PITRM1-210ENST00000488065 NUP88Q99567 741 aaPredicted RBP11.86□□□□□ -0.51
PITRM1-210ENST00000488065 MFRPQ9BY79 579 aa11.86□□□□□ -0.51
PITRM1-210ENST00000488065 TANGO6Q9C0B7 1094 aa11.86□□□□□ -0.51
PITRM1-210ENST00000488065 RPAP3Q9H6T3 665 aaPredicted RBP11.86□□□□□ -0.51
PITRM1-210ENST00000488065 GPCPD1Q9NPB8 672 aa11.86□□□□□ -0.51
PITRM1-210ENST00000488065 TSHZ2Q9NRE2 1034 aa11.86□□□□□ -0.51
PITRM1-210ENST00000488065 SH2B1Q9NRF2 756 aaPredicted RBP11.86□□□□□ -0.51
PITRM1-210ENST00000488065 RBM28Q9NW13 759 aaKnown RBP11.86□□□□□ -0.51
PITRM1-210ENST00000488065 PTPN22Q9Y2R2 807 aa11.86□□□□□ -0.51
PITRM1-210ENST00000488065 CCL15-CCL14A0A0B4J2E2 113 aa11.85□□□□□ -0.51
PITRM1-210ENST00000488065 STK25O00506 426 aa11.85□□□□□ -0.51
PITRM1-210ENST00000488065 CPLX1O14810 134 aa11.85□□□□□ -0.51
PITRM1-210ENST00000488065 DHX16O60231 1041 aaKnown RBP11.85□□□□□ -0.51
PITRM1-210ENST00000488065 CD2BP2O95400 341 aaKnown RBP11.85□□□□□ -0.51
PITRM1-210ENST00000488065 GOLGA8HP0CJ92 632 aa11.85□□□□□ -0.51
PITRM1-210ENST00000488065 VCAM1P19320 739 aa11.85□□□□□ -0.51
PITRM1-210ENST00000488065 ZNF543Q08ER8 600 aa11.85□□□□□ -0.51
PITRM1-210ENST00000488065 PABPC4Q13310 644 aaKnown RBP eCLIP11.85□□□□□ -0.51
PITRM1-210ENST00000488065 BECN1Q14457 450 aa11.85□□□□□ -0.51
PITRM1-210ENST00000488065 PPP2R5BQ15173 497 aa11.85□□□□□ -0.51
PITRM1-210ENST00000488065 CCL15Q16663 113 aa11.85□□□□□ -0.51
PITRM1-210ENST00000488065 ME3Q16798 604 aa11.85□□□□□ -0.51
PITRM1-210ENST00000488065 KIAA1755Q5JYT7 1200 aa11.85□□□□□ -0.51
PITRM1-210ENST00000488065 VARS2Q5ST30 1063 aaKnown RBP11.85□□□□□ -0.51
PITRM1-210ENST00000488065 CPLX2Q6PUV4 134 aaKnown RBP11.85□□□□□ -0.51
PITRM1-210ENST00000488065 KCTD1Q719H9 257 aa11.85□□□□□ -0.51
PITRM1-210ENST00000488065 NECAB1Q8N987 351 aa11.85□□□□□ -0.51
PITRM1-210ENST00000488065 PROCA1Q8NCQ7 364 aaPredicted RBP11.85□□□□□ -0.51
PITRM1-210ENST00000488065 BRI3BPQ8WY22 251 aa11.85□□□□□ -0.51
PITRM1-210ENST00000488065 ERO1AQ96HE7 468 aa11.85□□□□□ -0.51
PITRM1-210ENST00000488065 C12orf42Q96LP6 360 aa11.85□□□□□ -0.51
PITRM1-210ENST00000488065 EFCC1Q9HA90 598 aa11.85□□□□□ -0.51
PITRM1-210ENST00000488065 PTCH2Q9Y6C5 1203 aa11.85□□□□□ -0.51
PITRM1-210ENST00000488065 MYH4Q9Y623 1939 aa11.84□□□□□ -0.51
PITRM1-210ENST00000488065 USP17L15C9J2P7 530 aa11.84□□□□□ -0.51
PITRM1-210ENST00000488065 USP17L13C9JLJ4 530 aa11.84□□□□□ -0.51
PITRM1-210ENST00000488065 TMEM232C9JQI7 657 aa11.84□□□□□ -0.51
PITRM1-210ENST00000488065 USP17L11C9JVI0 530 aa11.84□□□□□ -0.51
PITRM1-210ENST00000488065 KLRF2D3W0D1 207 aa11.84□□□□□ -0.51
PITRM1-210ENST00000488065 USP17L18D6R9N7 530 aa11.84□□□□□ -0.51
PITRM1-210ENST00000488065 USP17L22D6RA61 530 aa11.84□□□□□ -0.51
PITRM1-210ENST00000488065 USP17L17D6RBQ6 530 aa11.84□□□□□ -0.51
PITRM1-210ENST00000488065 USP17L19D6RCP7 530 aa11.84□□□□□ -0.51
PITRM1-210ENST00000488065 USP17L20D6RJB6 530 aa11.84□□□□□ -0.51
PITRM1-210ENST00000488065 K7ELQ4 463 aaPredicted RBP11.84□□□□□ -0.51
PITRM1-210ENST00000488065 PFKFB2O60825 505 aa11.84□□□□□ -0.51
PITRM1-210ENST00000488065 SNHG28P0DPA3 235 aa11.84□□□□□ -0.51
PITRM1-210ENST00000488065 OSBPP22059 807 aa11.84□□□□□ -0.51
PITRM1-210ENST00000488065 INHBEP58166 350 aa11.84□□□□□ -0.51
PITRM1-210ENST00000488065 SP3Q02447 781 aa11.84□□□□□ -0.51
PITRM1-210ENST00000488065 USP17L24Q0WX57 530 aa11.84□□□□□ -0.51
PITRM1-210ENST00000488065 GPR153Q6NV75 609 aa11.84□□□□□ -0.51
PITRM1-210ENST00000488065 RASGRP2Q7LDG7 609 aa11.84□□□□□ -0.51
PITRM1-210ENST00000488065 FAM160B2Q86V87 743 aa11.84□□□□□ -0.51
PITRM1-210ENST00000488065 CHURC1Q8WUH1 139 aa11.84□□□□□ -0.51
PITRM1-210ENST00000488065 ARMC5Q96C12 935 aa11.84□□□□□ -0.51
PITRM1-210ENST00000488065 TMX3Q96JJ7 454 aa11.84□□□□□ -0.51
PITRM1-210ENST00000488065 LZTS2Q9BRK4 669 aa11.84□□□□□ -0.51
PITRM1-210ENST00000488065 MAD2L2Q9UI95 211 aa11.84□□□□□ -0.51
PITRM1-210ENST00000488065 FEM1BQ9UK73 627 aa11.84□□□□□ -0.51
PITRM1-210ENST00000488065 AGTPBP1Q9UPW5 1226 aa11.84□□□□□ -0.51
PITRM1-210ENST00000488065 PHIPQ8WWQ0 1821 aa11.83□□□□□ -0.51
PITRM1-210ENST00000488065 PALM3A6NDB9 673 aaPredicted RBP11.83□□□□□ -0.52
PITRM1-210ENST00000488065 FLOT1O75955 427 aa11.83□□□□□ -0.52
PITRM1-210ENST00000488065 CDKL5O76039 1030 aa11.83□□□□□ -0.52
PITRM1-210ENST00000488065 LARGE1O95461 756 aa11.83□□□□□ -0.52
PITRM1-210ENST00000488065 HSP90AA1P07900 732 aaKnown RBP11.83□□□□□ -0.52
PITRM1-210ENST00000488065 STAT2P52630 851 aa11.83□□□□□ -0.52
PITRM1-210ENST00000488065 IRX3P78415 501 aaPredicted RBP11.83□□□□□ -0.52
PITRM1-210ENST00000488065 SCRN1Q12765 414 aa11.83□□□□□ -0.52
PITRM1-210ENST00000488065 TREML2Q5T2D2 321 aa11.83□□□□□ -0.52
PITRM1-210ENST00000488065 OTUD7BQ6GQQ9 843 aa11.83□□□□□ -0.52
PITRM1-210ENST00000488065 TTBK2Q6IQ55 1244 aa11.83□□□□□ -0.52
PITRM1-210ENST00000488065 CCDC83Q8IWF9 413 aa11.83□□□□□ -0.52
PITRM1-210ENST00000488065 FAM43AQ8N2R8 423 aa11.83□□□□□ -0.52
PITRM1-210ENST00000488065 STAG2Q8N3U4 1231 aa11.83□□□□□ -0.52
PITRM1-210ENST00000488065 GTF3C6Q969F1 213 aa11.83□□□□□ -0.52
PITRM1-210ENST00000488065 KIFC2Q96AC6 838 aa11.83□□□□□ -0.52
PITRM1-210ENST00000488065 ZNF333Q96JL9 665 aa11.83□□□□□ -0.52
PITRM1-210ENST00000488065 ARHGAP39Q9C0H5 1083 aa11.83□□□□□ -0.52
PITRM1-210ENST00000488065 UBA5Q9GZZ9 404 aa11.83□□□□□ -0.52
PITRM1-210ENST00000488065 NCOA5Q9HCD5 579 aaKnown RBP11.83□□□□□ -0.52
PITRM1-210ENST00000488065 VAT1LQ9HCJ6 419 aa11.83□□□□□ -0.52
PITRM1-210ENST00000488065 RBM19Q9Y4C8 960 aaKnown RBP11.83□□□□□ -0.52
PITRM1-210ENST00000488065 CTDP1Q9Y5B0 961 aaPredicted RBP11.83□□□□□ -0.52
PITRM1-210ENST00000488065 COL6A3P12111 3177 aa11.82□□□□□ -0.52
PITRM1-210ENST00000488065 TESPA1A2RU30 521 aaPredicted RBP11.82□□□□□ -0.52
PITRM1-210ENST00000488065 PLEKHA8P1O95397 391 aa11.82□□□□□ -0.52
PITRM1-210ENST00000488065 CDC27P30260 824 aa11.82□□□□□ -0.52
PITRM1-210ENST00000488065 ADD1P35611 737 aaKnown RBP11.82□□□□□ -0.52
PITRM1-210ENST00000488065 SLC16A2P36021 539 aa11.82□□□□□ -0.52
PITRM1-210ENST00000488065 AKAP17AQ02040 695 aaKnown RBP11.82□□□□□ -0.52
PITRM1-210ENST00000488065 TAF1CQ15572 869 aaPredicted RBP11.82□□□□□ -0.52
PITRM1-210ENST00000488065 SYDE2Q5VT97 1194 aa11.82□□□□□ -0.52
PITRM1-210ENST00000488065 CATSPERGQ6ZRH7 1159 aa11.82□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms