RNA–Protein interactions for RNA: ENST00000488058.1

RNF38-208, Transcript of ring finger protein 38, humanhuman

TSL 3

Gene RNF38, Length 582 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF38-208ENST00000488058 U3KPZ7 1027 aaPredicted RBP27.86■■■□□ 2.05
RNF38-208ENST00000488058 ZNF536O15090 1300 aa27.86■■■□□ 2.05
RNF38-208ENST00000488058 MSCO60682 206 aa27.85■■■□□ 2.05
RNF38-208ENST00000488058 TINF2Q9BSI4 451 aa27.85■■■□□ 2.05
RNF38-208ENST00000488058 UBAC1Q9BSL1 405 aa27.85■■■□□ 2.05
RNF38-208ENST00000488058 ACAD9Q9H845 621 aa27.85■■■□□ 2.05
RNF38-208ENST00000488058 KAT14Q9H8E8 782 aa27.85■■■□□ 2.05
RNF38-208ENST00000488058 TNKSO95271 1327 aa27.85■■■□□ 2.05
RNF38-208ENST00000488058 MNX1P50219 401 aaPredicted RBP27.84■■■□□ 2.05
RNF38-208ENST00000488058 TRDNQ13061 729 aa27.84■■■□□ 2.05
RNF38-208ENST00000488058 CCPG1Q9ULG6 757 aa27.84■■■□□ 2.05
RNF38-208ENST00000488058 H0YGN5 161 aa27.83■■■□□ 2.05
RNF38-208ENST00000488058 CYP21A2P08686 494 aa27.83■■■□□ 2.05
RNF38-208ENST00000488058 ZNF543Q08ER8 600 aa27.83■■■□□ 2.05
RNF38-208ENST00000488058 BTNL9Q6UXG8 535 aa27.83■■■□□ 2.05
RNF38-208ENST00000488058 PNMA1Q8ND90 353 aa27.83■■■□□ 2.05
RNF38-208ENST00000488058 TRERF1Q96PN7 1200 aa27.83■■■□□ 2.05
RNF38-208ENST00000488058 SEPT4O43236 478 aa27.82■■■□□ 2.04
RNF38-208ENST00000488058 EVI5O60447 810 aa27.82■■■□□ 2.04
RNF38-208ENST00000488058 NEFLP07196 543 aa27.82■■■□□ 2.04
RNF38-208ENST00000488058 GOLGA8HP0CJ92 632 aa27.82■■■□□ 2.04
RNF38-208ENST00000488058 TAL1P17542 331 aaPredicted RBP27.82■■■□□ 2.04
RNF38-208ENST00000488058 TKFCQ3LXA3 575 aa27.82■■■□□ 2.04
RNF38-208ENST00000488058 KIAA1211Q6ZU35 1233 aa27.82■■■□□ 2.04
RNF38-208ENST00000488058 ENAHQ8N8S7 591 aaPredicted RBP27.82■■■□□ 2.04
RNF38-208ENST00000488058 RANBP17Q9H2T7 1088 aaKnown RBP27.82■■■□□ 2.04
RNF38-208ENST00000488058 ALPK3Q96L96 1907 aa27.81■■■□□ 2.04
RNF38-208ENST00000488058 DNAJC25-GNG10A0A024R161 153 aa27.81■■■□□ 2.04
RNF38-208ENST00000488058 MYCNP04198 464 aaPredicted RBP27.81■■■□□ 2.04
RNF38-208ENST00000488058 SNHG28P0DPA3 235 aa27.8■■■□□ 2.04
RNF38-208ENST00000488058 CYB5R4Q7L1T6 521 aa27.8■■■□□ 2.04
RNF38-208ENST00000488058 DHX30Q7L2E3 1194 aaKnown RBP eCLIP27.8■■■□□ 2.04
RNF38-208ENST00000488058 A1CFQ9NQ94 594 aaKnown RBP27.8■■■□□ 2.04
RNF38-208ENST00000488058 CNPY2Q9Y2B0 182 aa27.8■■■□□ 2.04
RNF38-208ENST00000488058 NR2E3Q9Y5X4 410 aa27.8■■■□□ 2.04
RNF38-208ENST00000488058 ICAM1P05362 532 aa27.79■■■□□ 2.04
RNF38-208ENST00000488058 BMP2KLQ5H9B9 411 aa27.79■■■□□ 2.04
RNF38-208ENST00000488058 MUM1L1Q5H9M0 696 aa27.79■■■□□ 2.04
RNF38-208ENST00000488058 GPATCH4Q5T3I0 446 aaKnown RBP27.79■■■□□ 2.04
RNF38-208ENST00000488058 IFIT1BQ5T764 474 aaKnown RBP27.79■■■□□ 2.04
RNF38-208ENST00000488058 RALYLQ86SE5 291 aaKnown RBP27.79■■■□□ 2.04
RNF38-208ENST00000488058 ANKS1AQ92625 1134 aa27.79■■■□□ 2.04
RNF38-208ENST00000488058 RBM8AQ9Y5S9 174 aaKnown RBP27.79■■■□□ 2.04
RNF38-208ENST00000488058 PFASO15067 1338 aa27.78■■■□□ 2.04
RNF38-208ENST00000488058 POTEB2H3BUK9 544 aa27.78■■■□□ 2.04
RNF38-208ENST00000488058 NSMFQ6X4W1 530 aa27.78■■■□□ 2.04
RNF38-208ENST00000488058 MAP4K1Q92918 833 aa27.78■■■□□ 2.04
RNF38-208ENST00000488058 ESYT1Q9BSJ8 1104 aa27.78■■■□□ 2.04
RNF38-208ENST00000488058 UBA5Q9GZZ9 404 aa27.78■■■□□ 2.04
RNF38-208ENST00000488058 CPVLQ9H3G5 476 aa27.78■■■□□ 2.04
RNF38-208ENST00000488058 NRBP1Q9UHY1 535 aa27.78■■■□□ 2.04
RNF38-208ENST00000488058 TAF6LQ9Y6J9 622 aa27.78■■■□□ 2.04
RNF38-208ENST00000488058 SMCHD1A6NHR9 2005 aa27.77■■■□□ 2.04
RNF38-208ENST00000488058 E7EWF7 191 aa27.77■■■□□ 2.04
RNF38-208ENST00000488058 CNTN2Q02246 1040 aa27.77■■■□□ 2.04
RNF38-208ENST00000488058 GJC2Q5T442 439 aaPredicted RBP27.77■■■□□ 2.04
RNF38-208ENST00000488058 C7orf61Q8IZ16 206 aa27.77■■■□□ 2.04
RNF38-208ENST00000488058 MSL3Q8N5Y2 521 aaKnown RBP27.77■■■□□ 2.04
RNF38-208ENST00000488058 ZHX1Q9UKY1 873 aaPredicted RBP27.77■■■□□ 2.04
RNF38-208ENST00000488058 MCM3APO60318 1980 aa27.77■■■□□ 2.04
RNF38-208ENST00000488058 SYNGAP1Q96PV0 1343 aa27.76■■■□□ 2.03
RNF38-208ENST00000488058 ZNF467Q7Z7K2 595 aaPredicted RBP27.76■■■□□ 2.03
RNF38-208ENST00000488058 NCOA7Q8NI08 942 aa27.76■■■□□ 2.03
RNF38-208ENST00000488058 FGD4Q96M96 766 aa27.76■■■□□ 2.03
RNF38-208ENST00000488058 SNAI1O95863 264 aaPredicted RBP27.75■■■□□ 2.03
RNF38-208ENST00000488058 ZNF865P0CJ78 1059 aaPredicted RBP27.75■■■□□ 2.03
RNF38-208ENST00000488058 MAMDC4Q6UXC1 1216 aa27.75■■■□□ 2.03
RNF38-208ENST00000488058 STOX1Q6ZVD7 989 aa27.75■■■□□ 2.03
RNF38-208ENST00000488058 ARRDC4Q8NCT1 418 aa27.75■■■□□ 2.03
RNF38-208ENST00000488058 SENP6Q9GZR1 1112 aaPredicted RBP27.75■■■□□ 2.03
RNF38-208ENST00000488058 ANO2Q9NQ90 1003 aa27.75■■■□□ 2.03
RNF38-208ENST00000488058 CDKN2AIPQ9NXV6 580 aaPredicted RBP27.75■■■□□ 2.03
RNF38-208ENST00000488058 KBTBD13C9JR72 458 aa27.74■■■□□ 2.03
RNF38-208ENST00000488058 DNM1LO00429 736 aa27.74■■■□□ 2.03
RNF38-208ENST00000488058 IFIT3O14879 490 aaKnown RBP27.74■■■□□ 2.03
RNF38-208ENST00000488058 DHX16O60231 1041 aaKnown RBP27.74■■■□□ 2.03
RNF38-208ENST00000488058 PARP1P09874 1014 aaKnown RBP27.74■■■□□ 2.03
RNF38-208ENST00000488058 RARBP10826 455 aa27.74■■■□□ 2.03
RNF38-208ENST00000488058 COL6A1P12109 1028 aa27.74■■■□□ 2.03
RNF38-208ENST00000488058 AKR1A1P14550 325 aa27.74■■■□□ 2.03
RNF38-208ENST00000488058 SEC23AQ15436 765 aa27.74■■■□□ 2.03
RNF38-208ENST00000488058 ASPRV1Q53RT3 343 aa27.74■■■□□ 2.03
RNF38-208ENST00000488058 ARMCX2Q7L311 632 aa27.74■■■□□ 2.03
RNF38-208ENST00000488058 FAM133AQ8N9E0 248 aa27.74■■■□□ 2.03
RNF38-208ENST00000488058 LSG1Q9H089 658 aaKnown RBP27.74■■■□□ 2.03
RNF38-208ENST00000488058 ERICH2A1L162 156 aa27.73■■■□□ 2.03
RNF38-208ENST00000488058 CHST3Q7LGC8 479 aa27.73■■■□□ 2.03
RNF38-208ENST00000488058 LENG1Q96BZ8 264 aaPredicted RBP27.73■■■□□ 2.03
RNF38-208ENST00000488058 XPNPEP3Q9NQH7 507 aa27.73■■■□□ 2.03
RNF38-208ENST00000488058 CYP39A1Q9NYL5 469 aa27.73■■■□□ 2.03
RNF38-208ENST00000488058 USH1GQ495M9 461 aa27.72■■■□□ 2.03
RNF38-208ENST00000488058 CCDC144CPQ8IYA2 1237 aa27.72■■■□□ 2.03
RNF38-208ENST00000488058 SOWAHBA6NEL2 793 aa27.71■■■□□ 2.03
RNF38-208ENST00000488058 NFIBO00712 420 aa27.71■■■□□ 2.03
RNF38-208ENST00000488058 ACVR2BQ13705 512 aa27.71■■■□□ 2.03
RNF38-208ENST00000488058 SART3Q15020 963 aaKnown RBP27.71■■■□□ 2.03
RNF38-208ENST00000488058 CDC37Q16543 378 aaPredicted RBP27.71■■■□□ 2.03
RNF38-208ENST00000488058 CASC1Q6TDU7 716 aa27.71■■■□□ 2.03
RNF38-208ENST00000488058 VAT1LQ9HCJ6 419 aa27.71■■■□□ 2.03
RNF38-208ENST00000488058 PNMA2Q9UL42 364 aa27.71■■■□□ 2.03
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms