RNA–Protein interactions for RNA: ENST00000487996.5

HLA-DMB-261, Transcript of major histocompatibility complex, class II, DM beta, humanhuman

Gene HLA-DMB, Length 1,746 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DMB-261ENST00000487996 ZSCAN16Q9H4T2 348 aaPredicted RBP12.17□□□□□ -0.46
HLA-DMB-261ENST00000487996 BARHL2Q9NY43 387 aa12.17□□□□□ -0.46
HLA-DMB-261ENST00000487996 HOXC10Q9NYD6 342 aa12.17□□□□□ -0.46
HLA-DMB-261ENST00000487996 CTDP1Q9Y5B0 961 aaPredicted RBP12.17□□□□□ -0.46
HLA-DMB-261ENST00000487996 TMEM88BA6NKF7 163 aa12.17□□□□□ -0.46
HLA-DMB-261ENST00000487996 HOXA7P31268 230 aaPredicted RBP12.17□□□□□ -0.46
HLA-DMB-261ENST00000487996 GNL2Q13823 731 aaKnown RBP12.17□□□□□ -0.46
HLA-DMB-261ENST00000487996 COG2Q14746 738 aa12.17□□□□□ -0.46
HLA-DMB-261ENST00000487996 SLC35G1Q2M3R5 365 aa12.17□□□□□ -0.46
HLA-DMB-261ENST00000487996 KRT40Q6A162 431 aa12.17□□□□□ -0.46
HLA-DMB-261ENST00000487996 GADL1Q6ZQY3 521 aa12.17□□□□□ -0.46
HLA-DMB-261ENST00000487996 TEX2Q8IWB9 1127 aa12.17□□□□□ -0.46
HLA-DMB-261ENST00000487996 HHIPL1Q96JK4 782 aa12.17□□□□□ -0.46
HLA-DMB-261ENST00000487996 AMNQ9BXJ7 453 aa12.17□□□□□ -0.46
HLA-DMB-261ENST00000487996 GLT8D2Q9H1C3 349 aa12.17□□□□□ -0.46
HLA-DMB-261ENST00000487996 CPVLQ9H3G5 476 aa12.17□□□□□ -0.46
HLA-DMB-261ENST00000487996 PPP1R9AQ9ULJ8 1098 aa12.17□□□□□ -0.46
HLA-DMB-261ENST00000487996 AGTPBP1Q9UPW5 1226 aa12.17□□□□□ -0.46
HLA-DMB-261ENST00000487996 MTMR6Q9Y217 621 aa12.17□□□□□ -0.46
HLA-DMB-261ENST00000487996 hCG_1642624A0A1W2PR95 340 aa12.16□□□□□ -0.46
HLA-DMB-261ENST00000487996 MMP1P03956 469 aa12.16□□□□□ -0.46
HLA-DMB-261ENST00000487996 GNA11P29992 359 aa12.16□□□□□ -0.46
HLA-DMB-261ENST00000487996 ZNF157P51786 506 aaPredicted RBP12.16□□□□□ -0.46
HLA-DMB-261ENST00000487996 NAPAP54920 295 aa12.16□□□□□ -0.46
HLA-DMB-261ENST00000487996 QRICH1Q2TAL8 776 aa12.16□□□□□ -0.46
HLA-DMB-261ENST00000487996 SPRYD7Q5W111 196 aa12.16□□□□□ -0.46
HLA-DMB-261ENST00000487996 CATSPERGQ6ZRH7 1159 aa12.16□□□□□ -0.46
HLA-DMB-261ENST00000487996 FBXO11Q86XK2 927 aa12.16□□□□□ -0.46
HLA-DMB-261ENST00000487996 BICD2Q8TD16 824 aa12.16□□□□□ -0.46
HLA-DMB-261ENST00000487996 AIFM3Q96NN9 605 aa12.16□□□□□ -0.46
HLA-DMB-261ENST00000487996 RANBP17Q9H2T7 1088 aaKnown RBP12.16□□□□□ -0.46
HLA-DMB-261ENST00000487996 VPS54Q9P1Q0 977 aa12.16□□□□□ -0.46
HLA-DMB-261ENST00000487996 PNMA3Q9UL41 463 aa12.16□□□□□ -0.46
HLA-DMB-261ENST00000487996 TLL2Q9Y6L7 1015 aa12.16□□□□□ -0.46
HLA-DMB-261ENST00000487996 ESYT2A0FGR8 921 aa12.15□□□□□ -0.46
HLA-DMB-261ENST00000487996 STXBP3O00186 592 aa12.15□□□□□ -0.46
HLA-DMB-261ENST00000487996 DTNBO60941 627 aa12.15□□□□□ -0.46
HLA-DMB-261ENST00000487996 ZBED4O75132 1171 aa12.15□□□□□ -0.46
HLA-DMB-261ENST00000487996 F13A1P00488 732 aa12.15□□□□□ -0.46
HLA-DMB-261ENST00000487996 NLRP5P59047 1200 aa12.15□□□□□ -0.46
HLA-DMB-261ENST00000487996 IRX3P78415 501 aaPredicted RBP12.15□□□□□ -0.46
HLA-DMB-261ENST00000487996 WWC2Q6AWC2 1192 aa12.15□□□□□ -0.46
HLA-DMB-261ENST00000487996 MCTP1Q6DN14 999 aa12.15□□□□□ -0.46
HLA-DMB-261ENST00000487996 RGMBQ6NW40 437 aa12.15□□□□□ -0.46
HLA-DMB-261ENST00000487996 MB21D1Q8N884 522 aa12.15□□□□□ -0.46
HLA-DMB-261ENST00000487996 CCDC102AQ96A19 550 aa12.15□□□□□ -0.46
HLA-DMB-261ENST00000487996 PHF20Q9BVI0 1012 aa12.15□□□□□ -0.46
HLA-DMB-261ENST00000487996 C6orf50Q9HD87 102 aa12.15□□□□□ -0.46
HLA-DMB-261ENST00000487996 ABT1Q9ULW3 272 aaKnown RBP12.15□□□□□ -0.46
HLA-DMB-261ENST00000487996 SLC45A1Q9Y2W3 748 aa12.15□□□□□ -0.46
HLA-DMB-261ENST00000487996 OSBPP22059 807 aa12.14□□□□□ -0.47
HLA-DMB-261ENST00000487996 FOSBP53539 338 aa12.14□□□□□ -0.47
HLA-DMB-261ENST00000487996 OAZ1P54368 228 aa12.14□□□□□ -0.47
HLA-DMB-261ENST00000487996 GUCY1B3Q02153 619 aa12.14□□□□□ -0.47
HLA-DMB-261ENST00000487996 DGKZQ13574 1117 aa12.14□□□□□ -0.47
HLA-DMB-261ENST00000487996 PKP1Q13835 747 aa12.14□□□□□ -0.47
HLA-DMB-261ENST00000487996 BRAPQ7Z569 592 aa12.14□□□□□ -0.47
HLA-DMB-261ENST00000487996 GTF3C2Q8WUA4 911 aaPredicted RBP12.14□□□□□ -0.47
HLA-DMB-261ENST00000487996 GPKOWQ92917 476 aaPredicted RBP eCLIP12.14□□□□□ -0.47
HLA-DMB-261ENST00000487996 ZMYND12Q9H0C1 365 aa12.14□□□□□ -0.47
HLA-DMB-261ENST00000487996 FOXP1Q9H334 677 aaPredicted RBP12.14□□□□□ -0.47
HLA-DMB-261ENST00000487996 SLC38A10Q9HBR0 1119 aa12.14□□□□□ -0.47
HLA-DMB-261ENST00000487996 FBXO28Q9NVF7 368 aa12.14□□□□□ -0.47
HLA-DMB-261ENST00000487996 PCDHA1Q9Y5I3 950 aa12.14□□□□□ -0.47
HLA-DMB-261ENST00000487996 PARP14Q460N5 1801 aa12.14□□□□□ -0.47
HLA-DMB-261ENST00000487996 ICAM1P05362 532 aa12.14□□□□□ -0.47
HLA-DMB-261ENST00000487996 KRT2P35908 639 aa12.14□□□□□ -0.47
HLA-DMB-261ENST00000487996 GJA5P36382 358 aa12.14□□□□□ -0.47
HLA-DMB-261ENST00000487996 MCTP2Q6DN12 878 aa12.14□□□□□ -0.47
HLA-DMB-261ENST00000487996 DIS3L2Q8IYB7 885 aaKnown RBP12.14□□□□□ -0.47
HLA-DMB-261ENST00000487996 DAGLBQ8NCG7 672 aa12.14□□□□□ -0.47
HLA-DMB-261ENST00000487996 CCL15-CCL14A0A0B4J2E2 113 aa12.13□□□□□ -0.47
HLA-DMB-261ENST00000487996 MANSC4A6NHS7 340 aaPredicted RBP12.13□□□□□ -0.47
HLA-DMB-261ENST00000487996 VWA5AO00534 786 aa12.13□□□□□ -0.47
HLA-DMB-261ENST00000487996 MRPL12P52815 198 aaKnown RBP12.13□□□□□ -0.47
HLA-DMB-261ENST00000487996 INHBEP58166 350 aa12.13□□□□□ -0.47
HLA-DMB-261ENST00000487996 CCL15Q16663 113 aa12.13□□□□□ -0.47
HLA-DMB-261ENST00000487996 TREML2Q5T2D2 321 aa12.13□□□□□ -0.47
HLA-DMB-261ENST00000487996 LBX2Q6XYB7 198 aa12.13□□□□□ -0.47
HLA-DMB-261ENST00000487996 RASAL3Q86YV0 1011 aa12.13□□□□□ -0.47
HLA-DMB-261ENST00000487996 CUL5Q93034 780 aa12.13□□□□□ -0.47
HLA-DMB-261ENST00000487996 MS4A4AQ96JQ5 239 aa12.13□□□□□ -0.47
HLA-DMB-261ENST00000487996 GBP4Q96PP9 640 aa12.13□□□□□ -0.47
HLA-DMB-261ENST00000487996 PCDHA4Q9UN74 947 aa12.13□□□□□ -0.47
HLA-DMB-261ENST00000487996 ADAMTS5Q9UNA0 930 aa12.13□□□□□ -0.47
HLA-DMB-261ENST00000487996 MRPL11Q9Y3B7 192 aaKnown RBP12.13□□□□□ -0.47
HLA-DMB-261ENST00000487996 ABCB11O95342 1321 aa12.13□□□□□ -0.47
HLA-DMB-261ENST00000487996 SMCO2A6NFE2 343 aa12.12□□□□□ -0.47
HLA-DMB-261ENST00000487996 ATP2A1O14983 1001 aa12.12□□□□□ -0.47
HLA-DMB-261ENST00000487996 SLC10A3P09131 477 aa12.12□□□□□ -0.47
HLA-DMB-261ENST00000487996 U2AF2P26368 475 aaKnown RBP eCLIP12.12□□□□□ -0.47
HLA-DMB-261ENST00000487996 ADCY7P51828 1080 aa12.12□□□□□ -0.47
HLA-DMB-261ENST00000487996 KIF23Q02241 960 aaPredicted RBP12.12□□□□□ -0.47
HLA-DMB-261ENST00000487996 ATL3Q6DD88 541 aa12.12□□□□□ -0.47
HLA-DMB-261ENST00000487996 OTUD7BQ6GQQ9 843 aa12.12□□□□□ -0.47
HLA-DMB-261ENST00000487996 CCDC174Q6PII3 467 aa12.12□□□□□ -0.47
HLA-DMB-261ENST00000487996 ANKRD23Q86SG2 305 aa12.12□□□□□ -0.47
HLA-DMB-261ENST00000487996 BLIDQ8IZY5 108 aa12.12□□□□□ -0.47
HLA-DMB-261ENST00000487996 JMYQ8N9B5 988 aa12.12□□□□□ -0.47
HLA-DMB-261ENST00000487996 ATG4CQ96DT6 458 aa12.12□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms