RNA–Protein interactions for RNA: ENST00000487496.1

SPEN-205, Transcript of spen family transcriptional repressor, humanhuman

TSL 1 (best)

Gene SPEN, Length 543 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPEN-205ENST00000487496 MSL3Q8N5Y2 521 aaKnown RBP13.47□□□□□ -0.25
SPEN-205ENST00000487496 GPCPD1Q9NPB8 672 aa13.47□□□□□ -0.25
SPEN-205ENST00000487496 COLQQ9Y215 455 aaPredicted RBP13.47□□□□□ -0.25
SPEN-205ENST00000487496 DNM1LO00429 736 aa13.46□□□□□ -0.25
SPEN-205ENST00000487496 SGSM2O43147 1006 aa13.46□□□□□ -0.25
SPEN-205ENST00000487496 ZNF865P0CJ78 1059 aaPredicted RBP13.46□□□□□ -0.25
SPEN-205ENST00000487496 SNHG28P0DPA3 235 aa13.46□□□□□ -0.25
SPEN-205ENST00000487496 TAL1P17542 331 aaPredicted RBP13.46□□□□□ -0.25
SPEN-205ENST00000487496 TKFCQ3LXA3 575 aa13.46□□□□□ -0.25
SPEN-205ENST00000487496 CCDC178Q5BJE1 867 aa13.46□□□□□ -0.25
SPEN-205ENST00000487496 HABP4Q5JVS0 413 aaKnown RBP13.46□□□□□ -0.25
SPEN-205ENST00000487496 SYDE2Q5VT97 1194 aa13.46□□□□□ -0.25
SPEN-205ENST00000487496 MAMDC4Q6UXC1 1216 aa13.46□□□□□ -0.25
SPEN-205ENST00000487496 ZNF467Q7Z7K2 595 aaPredicted RBP13.46□□□□□ -0.25
SPEN-205ENST00000487496 IQCA1Q86XH1 822 aa13.46□□□□□ -0.25
SPEN-205ENST00000487496 ARRDC4Q8NCT1 418 aa13.46□□□□□ -0.25
SPEN-205ENST00000487496 ANKS1AQ92625 1134 aa13.46□□□□□ -0.25
SPEN-205ENST00000487496 TRERF1Q96PN7 1200 aa13.46□□□□□ -0.25
SPEN-205ENST00000487496 RANBP17Q9H2T7 1088 aaKnown RBP13.46□□□□□ -0.25
SPEN-205ENST00000487496 ACAD9Q9H845 621 aa13.46□□□□□ -0.25
SPEN-205ENST00000487496 RNF146Q9NTX7 359 aa13.46□□□□□ -0.25
SPEN-205ENST00000487496 ZSWIM5Q9P217 1185 aa13.46□□□□□ -0.25
SPEN-205ENST00000487496 SYNGAP1Q96PV0 1343 aa13.45□□□□□ -0.26
SPEN-205ENST00000487496 SNAI1O95863 264 aaPredicted RBP13.45□□□□□ -0.26
SPEN-205ENST00000487496 ICAM1P05362 532 aa13.45□□□□□ -0.26
SPEN-205ENST00000487496 ALAS1P13196 640 aa13.45□□□□□ -0.26
SPEN-205ENST00000487496 PTH1RQ03431 593 aa13.45□□□□□ -0.26
SPEN-205ENST00000487496 ZNF543Q08ER8 600 aa13.45□□□□□ -0.26
SPEN-205ENST00000487496 GJC2Q5T442 439 aaPredicted RBP13.45□□□□□ -0.26
SPEN-205ENST00000487496 CHRDL2Q6WN34 429 aa13.45□□□□□ -0.26
SPEN-205ENST00000487496 C7orf61Q8IZ16 206 aa13.45□□□□□ -0.26
SPEN-205ENST00000487496 FGD4Q96M96 766 aa13.45□□□□□ -0.26
SPEN-205ENST00000487496 ZSCAN10Q96SZ4 725 aaPredicted RBP13.45□□□□□ -0.26
SPEN-205ENST00000487496 KRT23Q9C075 422 aa13.45□□□□□ -0.26
SPEN-205ENST00000487496 SENP6Q9GZR1 1112 aaPredicted RBP13.45□□□□□ -0.26
SPEN-205ENST00000487496 A1CFQ9NQ94 594 aaKnown RBP13.45□□□□□ -0.26
SPEN-205ENST00000487496 CCPG1Q9ULG6 757 aa13.45□□□□□ -0.26
SPEN-205ENST00000487496 CNPY2Q9Y2B0 182 aa13.45□□□□□ -0.26
SPEN-205ENST00000487496 LAMA4Q16363 1823 aa13.44□□□□□ -0.26
SPEN-205ENST00000487496 POTEB2H3BUK9 544 aa13.44□□□□□ -0.26
SPEN-205ENST00000487496 CNTN2Q02246 1040 aa13.44□□□□□ -0.26
SPEN-205ENST00000487496 MUM1L1Q5H9M0 696 aa13.44□□□□□ -0.26
SPEN-205ENST00000487496 CENPQQ7L2Z9 268 aaPredicted RBP13.44□□□□□ -0.26
SPEN-205ENST00000487496 ENAHQ8N8S7 591 aaPredicted RBP13.44□□□□□ -0.26
SPEN-205ENST00000487496 FAM133AQ8N9E0 248 aa13.44□□□□□ -0.26
SPEN-205ENST00000487496 PNMA1Q8ND90 353 aa13.44□□□□□ -0.26
SPEN-205ENST00000487496 KAT14Q9H8E8 782 aa13.44□□□□□ -0.26
SPEN-205ENST00000487496 CNNM2Q9H8M5 875 aa13.44□□□□□ -0.26
SPEN-205ENST00000487496 TNKSO95271 1327 aa13.43□□□□□ -0.26
SPEN-205ENST00000487496 MYCNP04198 464 aaPredicted RBP13.43□□□□□ -0.26
SPEN-205ENST00000487496 CYP21A2P08686 494 aa13.43□□□□□ -0.26
SPEN-205ENST00000487496 GOLGA8HP0CJ92 632 aa13.43□□□□□ -0.26
SPEN-205ENST00000487496 RARBP10826 455 aa13.43□□□□□ -0.26
SPEN-205ENST00000487496 AKR1A1P14550 325 aa13.43□□□□□ -0.26
SPEN-205ENST00000487496 LRRC26Q2I0M4 334 aa13.43□□□□□ -0.26
SPEN-205ENST00000487496 GPATCH4Q5T3I0 446 aaKnown RBP13.43□□□□□ -0.26
SPEN-205ENST00000487496 CDKN2AIPQ9NXV6 580 aaPredicted RBP13.43□□□□□ -0.26
SPEN-205ENST00000487496 PLXNA1Q9UIW2 1896 aa13.43□□□□□ -0.26
SPEN-205ENST00000487496 ZHX1Q9UKY1 873 aaPredicted RBP13.43□□□□□ -0.26
SPEN-205ENST00000487496 U3KPZ7 1027 aaPredicted RBP13.43□□□□□ -0.26
SPEN-205ENST00000487496 FRMPD3Q5JV73 1810 aa13.43□□□□□ -0.26
SPEN-205ENST00000487496 ALPK3Q96L96 1907 aa13.43□□□□□ -0.26
SPEN-205ENST00000487496 SOWAHBA6NEL2 793 aa13.42□□□□□ -0.26
SPEN-205ENST00000487496 KBTBD13C9JR72 458 aa13.42□□□□□ -0.26
SPEN-205ENST00000487496 SLC34A2O95436 690 aa13.42□□□□□ -0.26
SPEN-205ENST00000487496 ATN1P54259 1190 aaPredicted RBP13.42□□□□□ -0.26
SPEN-205ENST00000487496 ACVR2BQ13705 512 aa13.42□□□□□ -0.26
SPEN-205ENST00000487496 LRRC41Q15345 812 aa13.42□□□□□ -0.26
SPEN-205ENST00000487496 CYB5R4Q7L1T6 521 aa13.42□□□□□ -0.26
SPEN-205ENST00000487496 ARMCX2Q7L311 632 aa13.42□□□□□ -0.26
SPEN-205ENST00000487496 SKAP1Q86WV1 359 aa13.42□□□□□ -0.26
SPEN-205ENST00000487496 CCDC144CPQ8IYA2 1237 aa13.42□□□□□ -0.26
SPEN-205ENST00000487496 MAP4K1Q92918 833 aa13.42□□□□□ -0.26
SPEN-205ENST00000487496 LENG1Q96BZ8 264 aaPredicted RBP13.42□□□□□ -0.26
SPEN-205ENST00000487496 UBAC1Q9BSL1 405 aa13.42□□□□□ -0.26
SPEN-205ENST00000487496 PRO3102Q9H379 93 aa13.42□□□□□ -0.26
SPEN-205ENST00000487496 ABHD16BQ9H3Z7 469 aa13.42□□□□□ -0.26
SPEN-205ENST00000487496 XPNPEP3Q9NQH7 507 aa13.42□□□□□ -0.26
SPEN-205ENST00000487496 CYP39A1Q9NYL5 469 aa13.42□□□□□ -0.26
SPEN-205ENST00000487496 RBM27Q9P2N5 1060 aaKnown RBP13.42□□□□□ -0.26
SPEN-205ENST00000487496 FAM184BQ9ULE4 1060 aa13.42□□□□□ -0.26
SPEN-205ENST00000487496 ZMYND8Q9ULU4 1186 aaPredicted RBP13.42□□□□□ -0.26
SPEN-205ENST00000487496 PGK1P00558 417 aa13.41□□□□□ -0.26
SPEN-205ENST00000487496 SYN1P17600 705 aa13.41□□□□□ -0.26
SPEN-205ENST00000487496 TRDNQ13061 729 aa13.41□□□□□ -0.26
SPEN-205ENST00000487496 NSMFQ6X4W1 530 aa13.41□□□□□ -0.26
SPEN-205ENST00000487496 RNF180Q86T96 592 aa13.41□□□□□ -0.26
SPEN-205ENST00000487496 UBA5Q9GZZ9 404 aa13.41□□□□□ -0.26
SPEN-205ENST00000487496 KATNBL1Q9H079 304 aa13.41□□□□□ -0.26
SPEN-205ENST00000487496 CPVLQ9H3G5 476 aa13.41□□□□□ -0.26
SPEN-205ENST00000487496 PNMA2Q9UL42 364 aa13.41□□□□□ -0.26
SPEN-205ENST00000487496 TAF6LQ9Y6J9 622 aa13.41□□□□□ -0.26
SPEN-205ENST00000487496 SMCHD1A6NHR9 2005 aa13.4□□□□□ -0.26
SPEN-205ENST00000487496 ASTN1O14525 1302 aa13.4□□□□□ -0.26
SPEN-205ENST00000487496 E7EWF7 191 aa13.4□□□□□ -0.26
SPEN-205ENST00000487496 NFIBO00712 420 aa13.4□□□□□ -0.26
SPEN-205ENST00000487496 ADCYAP1R1P41586 468 aa13.4□□□□□ -0.26
SPEN-205ENST00000487496 BAATQ14032 418 aaPredicted RBP13.4□□□□□ -0.26
SPEN-205ENST00000487496 SEC23AQ15436 765 aa13.4□□□□□ -0.26
SPEN-205ENST00000487496 ASPRV1Q53RT3 343 aa13.4□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 63.7 ms