RNA–Protein interactions for RNA: ENST00000487244.5

UBE4B-209, Transcript of ubiquitination factor E4B, humanhuman

TSL 1 (best)

Gene UBE4B, Length 818 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE4B-209ENST00000487244 LPAR1Q92633 364 aa8.49□□□□□ -1.05
UBE4B-209ENST00000487244 ATG4CQ96DT6 458 aa8.49□□□□□ -1.05
UBE4B-209ENST00000487244 SH2D4AQ9H788 454 aa8.49□□□□□ -1.05
UBE4B-209ENST00000487244 GOPCQ9HD26 462 aa8.49□□□□□ -1.05
UBE4B-209ENST00000487244 IL17RBQ9NRM6 502 aa8.49□□□□□ -1.05
UBE4B-209ENST00000487244 PLA2G2EQ9NZK7 142 aa8.49□□□□□ -1.05
UBE4B-209ENST00000487244 NYAP2Q9P242 653 aa8.49□□□□□ -1.05
UBE4B-209ENST00000487244 ZNF236Q9UL36 1845 aa8.49□□□□□ -1.05
UBE4B-209ENST00000487244 PLXNA1Q9UIW2 1896 aa8.49□□□□□ -1.05
UBE4B-209ENST00000487244 TSPY2A6NKD2 308 aa8.48□□□□□ -1.05
UBE4B-209ENST00000487244 F5H6K3 240 aa8.48□□□□□ -1.05
UBE4B-209ENST00000487244 WDR46O15213 610 aaKnown RBP8.48□□□□□ -1.05
UBE4B-209ENST00000487244 RANBP6O60518 1105 aaKnown RBP8.48□□□□□ -1.05
UBE4B-209ENST00000487244 TTLL1O95922 423 aa8.48□□□□□ -1.05
UBE4B-209ENST00000487244 FGRP09769 529 aa8.48□□□□□ -1.05
UBE4B-209ENST00000487244 HOXD10P28358 340 aa8.48□□□□□ -1.05
UBE4B-209ENST00000487244 GRK4P32298 578 aa8.48□□□□□ -1.05
UBE4B-209ENST00000487244 MFAP1P55081 439 aaKnown RBP8.48□□□□□ -1.05
UBE4B-209ENST00000487244 PRMT2P55345 433 aa8.48□□□□□ -1.05
UBE4B-209ENST00000487244 PTH1RQ03431 593 aa8.48□□□□□ -1.05
UBE4B-209ENST00000487244 KLRC3Q07444 240 aa8.48□□□□□ -1.05
UBE4B-209ENST00000487244 COG2Q14746 738 aa8.48□□□□□ -1.05
UBE4B-209ENST00000487244 MTFR1Q15390 333 aa8.48□□□□□ -1.05
UBE4B-209ENST00000487244 GPR142Q7Z601 462 aa8.48□□□□□ -1.05
UBE4B-209ENST00000487244 PXYLP1Q8TE99 480 aa8.48□□□□□ -1.05
UBE4B-209ENST00000487244 COA7Q96BR5 231 aa8.48□□□□□ -1.05
UBE4B-209ENST00000487244 ZNF287Q9HBT7 754 aa8.48□□□□□ -1.05
UBE4B-209ENST00000487244 TOMM22Q9NS69 142 aa8.48□□□□□ -1.05
UBE4B-209ENST00000487244 GJD2Q9UKL4 321 aa8.48□□□□□ -1.05
UBE4B-209ENST00000487244 RABGAP1Q9Y3P9 1069 aa8.48□□□□□ -1.05
UBE4B-209ENST00000487244 FRMPD3Q5JV73 1810 aa8.47□□□□□ -1.05
UBE4B-209ENST00000487244 ADCY3O60266 1144 aa8.47□□□□□ -1.05
UBE4B-209ENST00000487244 RGS19P49795 217 aa8.47□□□□□ -1.05
UBE4B-209ENST00000487244 TRIM32Q13049 653 aa8.47□□□□□ -1.05
UBE4B-209ENST00000487244 IRF5Q13568 498 aa8.47□□□□□ -1.05
UBE4B-209ENST00000487244 TMEM132BQ14DG7 1078 aa8.47□□□□□ -1.05
UBE4B-209ENST00000487244 AKNAD1Q5T1N1 836 aa8.47□□□□□ -1.05
UBE4B-209ENST00000487244 WDR78Q5VTH9 848 aa8.47□□□□□ -1.05
UBE4B-209ENST00000487244 METTL3Q86U44 580 aaKnown RBP8.47□□□□□ -1.05
UBE4B-209ENST00000487244 GMCL1P1Q8NEA9 526 aa8.47□□□□□ -1.05
UBE4B-209ENST00000487244 GTF3C2Q8WUA4 911 aaPredicted RBP8.47□□□□□ -1.05
UBE4B-209ENST00000487244 STAG1Q8WVM7 1258 aa8.47□□□□□ -1.05
UBE4B-209ENST00000487244 CCDC136Q96JN2 1154 aa8.47□□□□□ -1.05
UBE4B-209ENST00000487244 DSCC1Q9BVC3 393 aa8.47□□□□□ -1.05
UBE4B-209ENST00000487244 MOV10L1Q9BXT6 1211 aaKnown RBP8.47□□□□□ -1.05
UBE4B-209ENST00000487244 TMEM134Q9H6X4 195 aa8.47□□□□□ -1.05
UBE4B-209ENST00000487244 PPP1R9AQ9ULJ8 1098 aa8.47□□□□□ -1.05
UBE4B-209ENST00000487244 STX8Q9UNK0 236 aa8.47□□□□□ -1.05
UBE4B-209ENST00000487244 TAF6LQ9Y6J9 622 aa8.47□□□□□ -1.05
UBE4B-209ENST00000487244 RAD50Q92878 1312 aa8.47□□□□□ -1.05
UBE4B-209ENST00000487244 MCM3APO60318 1980 aa8.46□□□□□ -1.05
UBE4B-209ENST00000487244 VWA5AO00534 786 aa8.46□□□□□ -1.06
UBE4B-209ENST00000487244 ZNF213O14771 459 aa8.46□□□□□ -1.06
UBE4B-209ENST00000487244 SGSM2O43147 1006 aa8.46□□□□□ -1.06
UBE4B-209ENST00000487244 INHAP05111 366 aa8.46□□□□□ -1.06
UBE4B-209ENST00000487244 EN2P19622 333 aaPredicted RBP8.46□□□□□ -1.06
UBE4B-209ENST00000487244 CYP2B6P20813 491 aa8.46□□□□□ -1.06
UBE4B-209ENST00000487244 MAPK4P31152 587 aa8.46□□□□□ -1.06
UBE4B-209ENST00000487244 NOVP48745 357 aa8.46□□□□□ -1.06
UBE4B-209ENST00000487244 PLS1Q14651 629 aa8.46□□□□□ -1.06
UBE4B-209ENST00000487244 CCL14Q16627 93 aa8.46□□□□□ -1.06
UBE4B-209ENST00000487244 MORN1Q5T089 497 aa8.46□□□□□ -1.06
UBE4B-209ENST00000487244 SLFN13Q68D06 897 aa8.46□□□□□ -1.06
UBE4B-209ENST00000487244 RCSD1Q6JBY9 416 aa8.46□□□□□ -1.06
UBE4B-209ENST00000487244 MFSD6Q6ZSS7 791 aa8.46□□□□□ -1.06
UBE4B-209ENST00000487244 PLEKHH3Q7Z736 793 aa8.46□□□□□ -1.06
UBE4B-209ENST00000487244 REPS2Q8NFH8 660 aa8.46□□□□□ -1.06
UBE4B-209ENST00000487244 TRIB2Q92519 343 aa8.46□□□□□ -1.06
UBE4B-209ENST00000487244 USP6NLQ92738 828 aa8.46□□□□□ -1.06
UBE4B-209ENST00000487244 MKL1Q969V6 931 aa8.46□□□□□ -1.06
UBE4B-209ENST00000487244 ZKSCAN3Q9BRR0 538 aa8.46□□□□□ -1.06
UBE4B-209ENST00000487244 SPATC1LQ9H0A9 340 aa8.46□□□□□ -1.06
UBE4B-209ENST00000487244 UNC93B1Q9H1C4 597 aa8.46□□□□□ -1.06
UBE4B-209ENST00000487244 HOXC10Q9NYD6 342 aa8.46□□□□□ -1.06
UBE4B-209ENST00000487244 BIN2Q9UBW5 565 aaPredicted RBP8.46□□□□□ -1.06
UBE4B-209ENST00000487244 ADAMTS5Q9UNA0 930 aa8.46□□□□□ -1.06
UBE4B-209ENST00000487244 MTMR7Q9Y216 660 aa8.46□□□□□ -1.06
UBE4B-209ENST00000487244 CEP290O15078 2479 aa8.46□□□□□ -1.06
UBE4B-209ENST00000487244 LCTP09848 1927 aa8.45□□□□□ -1.06
UBE4B-209ENST00000487244 B4E1Z4 1266 aa8.45□□□□□ -1.06
UBE4B-209ENST00000487244 KDM4AO75164 1064 aa8.45□□□□□ -1.06
UBE4B-209ENST00000487244 NEFLP07196 543 aa8.45□□□□□ -1.06
UBE4B-209ENST00000487244 CCL5P13501 91 aa8.45□□□□□ -1.06
UBE4B-209ENST00000487244 ERCC3P19447 782 aa8.45□□□□□ -1.06
UBE4B-209ENST00000487244 MCCP23508 829 aa8.45□□□□□ -1.06
UBE4B-209ENST00000487244 CCNA1P78396 465 aa8.45□□□□□ -1.06
UBE4B-209ENST00000487244 MAP2K5Q13163 448 aa8.45□□□□□ -1.06
UBE4B-209ENST00000487244 NBPF11Q86T75 865 aa8.45□□□□□ -1.06
UBE4B-209ENST00000487244 CCAR1Q8IX12 1150 aaKnown RBP8.45□□□□□ -1.06
UBE4B-209ENST00000487244 MB21D1Q8N884 522 aa8.45□□□□□ -1.06
UBE4B-209ENST00000487244 RUFY2Q8WXA3 655 aa8.45□□□□□ -1.06
UBE4B-209ENST00000487244 SOCS4Q8WXH5 440 aa8.45□□□□□ -1.06
UBE4B-209ENST00000487244 SHISA4Q96DD7 197 aa8.45□□□□□ -1.06
UBE4B-209ENST00000487244 NUDT12Q9BQG2 462 aa8.45□□□□□ -1.06
UBE4B-209ENST00000487244 SLF1Q9BQI6 1058 aa8.45□□□□□ -1.06
UBE4B-209ENST00000487244 TMEM47Q9BQJ4 181 aa8.45□□□□□ -1.06
UBE4B-209ENST00000487244 FLRT1Q9NZU1 646 aa8.45□□□□□ -1.06
UBE4B-209ENST00000487244 ZNF214Q9UL59 606 aaPredicted RBP8.45□□□□□ -1.06
UBE4B-209ENST00000487244 ISY1Q9ULR0 285 aaKnown RBP8.45□□□□□ -1.06
UBE4B-209ENST00000487244 SYNPO2Q9UMS6 1093 aa8.45□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms