RNA–Protein interactions for RNA: ENST00000487084.1

CDHR3-212, Transcript of cadherin related family member 3, humanhuman

TSL 3

Gene CDHR3, Length 834 nt, Biotype processed transcript.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDHR3-212ENST00000487084 IFIT1BQ5T764 474 aaKnown RBP26.25■■□□□ 1.79
CDHR3-212ENST00000487084 CASC1Q6TDU7 716 aa26.25■■□□□ 1.79
CDHR3-212ENST00000487084 BTNL9Q6UXG8 535 aa26.25■■□□□ 1.79
CDHR3-212ENST00000487084 LSG1Q9H089 658 aaKnown RBP26.25■■□□□ 1.79
CDHR3-212ENST00000487084 ACAD9Q9H845 621 aa26.25■■□□□ 1.79
CDHR3-212ENST00000487084 RNF146Q9NTX7 359 aa26.25■■□□□ 1.79
CDHR3-212ENST00000487084 SNHG28P0DPA3 235 aa26.24■■□□□ 1.79
CDHR3-212ENST00000487084 CYBAP13498 195 aa26.24■■□□□ 1.79
CDHR3-212ENST00000487084 CAPN2P17655 700 aa26.24■■□□□ 1.79
CDHR3-212ENST00000487084 TRPV1Q8NER1 839 aa26.24■■□□□ 1.79
CDHR3-212ENST00000487084 NCOA7Q8NI08 942 aa26.24■■□□□ 1.79
CDHR3-212ENST00000487084 ANKS1AQ92625 1134 aa26.24■■□□□ 1.79
CDHR3-212ENST00000487084 CCPG1Q9ULG6 757 aa26.24■■□□□ 1.79
CDHR3-212ENST00000487084 CDC45O75419 566 aa26.23■■□□□ 1.79
CDHR3-212ENST00000487084 IGHA2P01877 340 aa26.23■■□□□ 1.79
CDHR3-212ENST00000487084 TAL1P17542 331 aaPredicted RBP26.23■■□□□ 1.79
CDHR3-212ENST00000487084 GPATCH4Q5T3I0 446 aaKnown RBP26.23■■□□□ 1.79
CDHR3-212ENST00000487084 STOX1Q6ZVD7 989 aa26.23■■□□□ 1.79
CDHR3-212ENST00000487084 UBE2Q1Q7Z7E8 422 aa26.23■■□□□ 1.79
CDHR3-212ENST00000487084 DIS3LQ8TF46 1054 aaKnown RBP26.23■■□□□ 1.79
CDHR3-212ENST00000487084 TRERF1Q96PN7 1200 aa26.23■■□□□ 1.79
CDHR3-212ENST00000487084 RANBP17Q9H2T7 1088 aaKnown RBP26.23■■□□□ 1.79
CDHR3-212ENST00000487084 TKFCQ3LXA3 575 aa26.22■■□□□ 1.79
CDHR3-212ENST00000487084 PRAMEF19Q5SWL8 479 aa26.22■■□□□ 1.79
CDHR3-212ENST00000487084 DDX20Q9UHI6 824 aaKnown RBP26.22■■□□□ 1.79
CDHR3-212ENST00000487084 OGDHLQ9ULD0 1010 aa26.22■■□□□ 1.79
CDHR3-212ENST00000487084 DIS3Q9Y2L1 958 aaKnown RBP26.22■■□□□ 1.79
CDHR3-212ENST00000487084 ICAM1P05362 532 aa26.21■■□□□ 1.79
CDHR3-212ENST00000487084 LHX8Q68G74 356 aa26.21■■□□□ 1.79
CDHR3-212ENST00000487084 ANKLE1Q8NAG6 615 aa26.21■■□□□ 1.79
CDHR3-212ENST00000487084 PAWRQ96IZ0 340 aaKnown RBP26.21■■□□□ 1.79
CDHR3-212ENST00000487084 TINF2Q9BSI4 451 aa26.21■■□□□ 1.79
CDHR3-212ENST00000487084 UBA5Q9GZZ9 404 aa26.21■■□□□ 1.79
CDHR3-212ENST00000487084 ZNFX1Q9P2E3 1918 aaKnown RBP26.2■■□□□ 1.79
CDHR3-212ENST00000487084 ERICH2A1L162 156 aa26.2■■□□□ 1.78
CDHR3-212ENST00000487084 IFIT3O14879 490 aaKnown RBP26.2■■□□□ 1.78
CDHR3-212ENST00000487084 SEC23AQ15436 765 aa26.2■■□□□ 1.78
CDHR3-212ENST00000487084 DHX30Q7L2E3 1194 aaKnown RBP eCLIP26.2■■□□□ 1.78
CDHR3-212ENST00000487084 CHST3Q7LGC8 479 aa26.2■■□□□ 1.78
CDHR3-212ENST00000487084 DPF3Q92784 378 aa26.2■■□□□ 1.78
CDHR3-212ENST00000487084 HTATIP2Q9BUP3 242 aa26.2■■□□□ 1.78
CDHR3-212ENST00000487084 CPVLQ9H3G5 476 aa26.2■■□□□ 1.78
CDHR3-212ENST00000487084 DNAJC25-GNG10A0A024R161 153 aa26.19■■□□□ 1.78
CDHR3-212ENST00000487084 MSCO60682 206 aa26.19■■□□□ 1.78
CDHR3-212ENST00000487084 PARP1P09874 1014 aaKnown RBP26.19■■□□□ 1.78
CDHR3-212ENST00000487084 SART3Q15020 963 aaKnown RBP26.19■■□□□ 1.78
CDHR3-212ENST00000487084 ASPRV1Q53RT3 343 aa26.19■■□□□ 1.78
CDHR3-212ENST00000487084 MUM1L1Q5H9M0 696 aa26.19■■□□□ 1.78
CDHR3-212ENST00000487084 PRPF38BQ5VTL8 546 aaKnown RBP26.19■■□□□ 1.78
CDHR3-212ENST00000487084 ANO1Q5XXA6 986 aa26.19■■□□□ 1.78
CDHR3-212ENST00000487084 NECAB2Q7Z6G3 386 aa26.19■■□□□ 1.78
CDHR3-212ENST00000487084 A1CFQ9NQ94 594 aaKnown RBP26.19■■□□□ 1.78
CDHR3-212ENST00000487084 POTEB2H3BUK9 544 aa26.18■■□□□ 1.78
CDHR3-212ENST00000487084 SLC27A2O14975 620 aa26.18■■□□□ 1.78
CDHR3-212ENST00000487084 PPP4R2Q9NY27 417 aa26.18■■□□□ 1.78
CDHR3-212ENST00000487084 CNPY2Q9Y2B0 182 aa26.18■■□□□ 1.78
CDHR3-212ENST00000487084 SEPT4O43236 478 aa26.17■■□□□ 1.78
CDHR3-212ENST00000487084 DHX16O60231 1041 aaKnown RBP26.17■■□□□ 1.78
CDHR3-212ENST00000487084 WTAPQ15007 396 aa26.17■■□□□ 1.78
CDHR3-212ENST00000487084 CREB3L3Q68CJ9 461 aa26.17■■□□□ 1.78
CDHR3-212ENST00000487084 NSMFQ6X4W1 530 aa26.17■■□□□ 1.78
CDHR3-212ENST00000487084 PLXNA1Q9UIW2 1896 aa26.17■■□□□ 1.78
CDHR3-212ENST00000487084 PFASO15067 1338 aa26.16■■□□□ 1.78
CDHR3-212ENST00000487084 CNTN2Q02246 1040 aa26.16■■□□□ 1.78
CDHR3-212ENST00000487084 TMEM67Q5HYA8 995 aa26.16■■□□□ 1.78
CDHR3-212ENST00000487084 MB21D2Q8IYB1 491 aaPredicted RBP26.16■■□□□ 1.78
CDHR3-212ENST00000487084 C11orf49Q9H6J7 331 aa26.16■■□□□ 1.78
CDHR3-212ENST00000487084 MYCNP04198 464 aaPredicted RBP26.15■■□□□ 1.78
CDHR3-212ENST00000487084 MNX1P50219 401 aaPredicted RBP26.15■■□□□ 1.78
CDHR3-212ENST00000487084 ANTXR2P58335 489 aa26.15■■□□□ 1.78
CDHR3-212ENST00000487084 MSL3Q8N5Y2 521 aaKnown RBP26.15■■□□□ 1.78
CDHR3-212ENST00000487084 SENP2Q9HC62 589 aa26.15■■□□□ 1.78
CDHR3-212ENST00000487084 NRBP1Q9UHY1 535 aa26.15■■□□□ 1.78
CDHR3-212ENST00000487084 SYNGAP1Q96PV0 1343 aa26.14■■□□□ 1.78
CDHR3-212ENST00000487084 NECTIN1Q15223 517 aa26.14■■□□□ 1.78
CDHR3-212ENST00000487084 CDC37Q16543 378 aaPredicted RBP26.14■■□□□ 1.78
CDHR3-212ENST00000487084 ERICH6BQ5W0A0 696 aa26.14■■□□□ 1.78
CDHR3-212ENST00000487084 ZNF467Q7Z7K2 595 aaPredicted RBP26.14■■□□□ 1.78
CDHR3-212ENST00000487084 ADGRF4Q8IZF3 695 aa26.14■■□□□ 1.78
CDHR3-212ENST00000487084 FGD4Q96M96 766 aa26.14■■□□□ 1.78
CDHR3-212ENST00000487084 VAT1LQ9HCJ6 419 aa26.14■■□□□ 1.78
CDHR3-212ENST00000487084 CYP39A1Q9NYL5 469 aa26.14■■□□□ 1.78
CDHR3-212ENST00000487084 ZHX1Q9UKY1 873 aaPredicted RBP26.14■■□□□ 1.78
CDHR3-212ENST00000487084 PNMA2Q9UL42 364 aa26.14■■□□□ 1.78
CDHR3-212ENST00000487084 NFIBO00712 420 aa26.13■■□□□ 1.77
CDHR3-212ENST00000487084 USH1GQ495M9 461 aa26.13■■□□□ 1.77
CDHR3-212ENST00000487084 RNF20Q5VTR2 975 aa26.13■■□□□ 1.77
CDHR3-212ENST00000487084 MAMDC4Q6UXC1 1216 aa26.13■■□□□ 1.77
CDHR3-212ENST00000487084 STAG2Q8N3U4 1231 aa26.13■■□□□ 1.77
CDHR3-212ENST00000487084 FAM133AQ8N9E0 248 aa26.13■■□□□ 1.77
CDHR3-212ENST00000487084 WDR19Q8NEZ3 1342 aa26.13■■□□□ 1.77
CDHR3-212ENST00000487084 PRC1O43663 620 aa26.12■■□□□ 1.77
CDHR3-212ENST00000487084 SNAI1O95863 264 aaPredicted RBP26.12■■□□□ 1.77
CDHR3-212ENST00000487084 ZNF865P0CJ78 1059 aaPredicted RBP26.12■■□□□ 1.77
CDHR3-212ENST00000487084 ARMCX2Q7L311 632 aa26.12■■□□□ 1.77
CDHR3-212ENST00000487084 CDKN2AIPQ9NXV6 580 aaPredicted RBP26.12■■□□□ 1.77
CDHR3-212ENST00000487084 PTPDC1A2A3K4 754 aa26.11■■□□□ 1.77
CDHR3-212ENST00000487084 RARBP10826 455 aa26.11■■□□□ 1.77
CDHR3-212ENST00000487084 MCM5P33992 734 aa26.11■■□□□ 1.77
CDHR3-212ENST00000487084 GJC2Q5T442 439 aaPredicted RBP26.11■■□□□ 1.77
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms