RNA–Protein interactions for RNA: ENST00000487068.1

NEK4-204, Transcript of NIMA related kinase 4, humanhuman

TSL 2

Gene NEK4, Length 631 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK4-204ENST00000487068 TAF6LQ9Y6J9 622 aa11.96□□□□□ -0.49
NEK4-204ENST00000487068 LRRC37A2A6NM11 1700 aa11.96□□□□□ -0.49
NEK4-204ENST00000487068 TRIOBPQ9H2D6 2365 aa11.96□□□□□ -0.5
NEK4-204ENST00000487068 STRNO43815 780 aa11.95□□□□□ -0.5
NEK4-204ENST00000487068 FDX1P10109 184 aa11.95□□□□□ -0.5
NEK4-204ENST00000487068 ALAS1P13196 640 aa11.95□□□□□ -0.5
NEK4-204ENST00000487068 PRKAR2AP13861 404 aaKnown RBP11.95□□□□□ -0.5
NEK4-204ENST00000487068 NOVP48745 357 aa11.95□□□□□ -0.5
NEK4-204ENST00000487068 ZNF543Q08ER8 600 aa11.95□□□□□ -0.5
NEK4-204ENST00000487068 CCL14Q16627 93 aa11.95□□□□□ -0.5
NEK4-204ENST00000487068 TMEM67Q5HYA8 995 aa11.95□□□□□ -0.5
NEK4-204ENST00000487068 MORN1Q5T089 497 aa11.95□□□□□ -0.5
NEK4-204ENST00000487068 GPATCH4Q5T3I0 446 aaKnown RBP11.95□□□□□ -0.5
NEK4-204ENST00000487068 SYDE2Q5VT97 1194 aa11.95□□□□□ -0.5
NEK4-204ENST00000487068 TTBK2Q6IQ55 1244 aa11.95□□□□□ -0.5
NEK4-204ENST00000487068 STOX1Q6ZVD7 989 aa11.95□□□□□ -0.5
NEK4-204ENST00000487068 SPRYD3Q8NCJ5 442 aa11.95□□□□□ -0.5
NEK4-204ENST00000487068 REPS2Q8NFH8 660 aa11.95□□□□□ -0.5
NEK4-204ENST00000487068 DDX11Q96FC9 970 aa11.95□□□□□ -0.5
NEK4-204ENST00000487068 HTATIP2Q9BUP3 242 aa11.95□□□□□ -0.5
NEK4-204ENST00000487068 UNC93B1Q9H1C4 597 aa11.95□□□□□ -0.5
NEK4-204ENST00000487068 RBM27Q9P2N5 1060 aaKnown RBP11.95□□□□□ -0.5
NEK4-204ENST00000487068 GJD2Q9UKL4 321 aa11.95□□□□□ -0.5
NEK4-204ENST00000487068 CCPG1Q9ULG6 757 aa11.95□□□□□ -0.5
NEK4-204ENST00000487068 ADAMTS5Q9UNA0 930 aa11.95□□□□□ -0.5
NEK4-204ENST00000487068 REC8O95072 547 aa11.94□□□□□ -0.5
NEK4-204ENST00000487068 PARP1P09874 1014 aaKnown RBP11.94□□□□□ -0.5
NEK4-204ENST00000487068 XRCC5P13010 732 aaKnown RBP11.94□□□□□ -0.5
NEK4-204ENST00000487068 OAZ1P54368 228 aa11.94□□□□□ -0.5
NEK4-204ENST00000487068 TRIM32Q13049 653 aa11.94□□□□□ -0.5
NEK4-204ENST00000487068 MFSD14CQ5VZR4 134 aa11.94□□□□□ -0.5
NEK4-204ENST00000487068 NFXL1Q6ZNB6 911 aa11.94□□□□□ -0.5
NEK4-204ENST00000487068 ANKRD35Q8N283 1001 aa11.94□□□□□ -0.5
NEK4-204ENST00000487068 XRN2Q9H0D6 950 aaKnown RBP eCLIP11.94□□□□□ -0.5
NEK4-204ENST00000487068 HMX1Q9NP08 348 aaPredicted RBP11.94□□□□□ -0.5
NEK4-204ENST00000487068 RNF146Q9NTX7 359 aa11.94□□□□□ -0.5
NEK4-204ENST00000487068 FBXO40Q9UH90 709 aa11.94□□□□□ -0.5
NEK4-204ENST00000487068 ALPK3Q96L96 1907 aa11.94□□□□□ -0.5
NEK4-204ENST00000487068 CEP290O15078 2479 aa11.93□□□□□ -0.5
NEK4-204ENST00000487068 PRC1O43663 620 aa11.93□□□□□ -0.5
NEK4-204ENST00000487068 PLA2G6O60733 806 aa11.93□□□□□ -0.5
NEK4-204ENST00000487068 PGK2P07205 417 aa11.93□□□□□ -0.5
NEK4-204ENST00000487068 CNGA1P29973 690 aa11.93□□□□□ -0.5
NEK4-204ENST00000487068 MCM5P33992 734 aa11.93□□□□□ -0.5
NEK4-204ENST00000487068 ASPRV1Q53RT3 343 aa11.93□□□□□ -0.5
NEK4-204ENST00000487068 CATIPQ7Z7H3 387 aa11.93□□□□□ -0.5
NEK4-204ENST00000487068 MB21D2Q8IYB1 491 aaPredicted RBP11.93□□□□□ -0.5
NEK4-204ENST00000487068 ABRAQ8N0Z2 381 aa11.93□□□□□ -0.5
NEK4-204ENST00000487068 NPLOC4Q8TAT6 608 aa11.93□□□□□ -0.5
NEK4-204ENST00000487068 AGBL1Q96MI9 1066 aa11.93□□□□□ -0.5
NEK4-204ENST00000487068 DEFB118Q96PH6 123 aa11.93□□□□□ -0.5
NEK4-204ENST00000487068 ACAD9Q9H845 621 aa11.93□□□□□ -0.5
NEK4-204ENST00000487068 RIPK3Q9Y572 518 aa11.93□□□□□ -0.5
NEK4-204ENST00000487068 KIAA1217Q5T5P2 1943 aa11.93□□□□□ -0.5
NEK4-204ENST00000487068 CCDC69A6NI79 296 aa11.92□□□□□ -0.5
NEK4-204ENST00000487068 ATP2A1O14983 1001 aa11.92□□□□□ -0.5
NEK4-204ENST00000487068 GJB1P08034 283 aa11.92□□□□□ -0.5
NEK4-204ENST00000487068 GJA8P48165 433 aa11.92□□□□□ -0.5
NEK4-204ENST00000487068 FGD1P98174 961 aa11.92□□□□□ -0.5
NEK4-204ENST00000487068 NECTIN1Q15223 517 aa11.92□□□□□ -0.5
NEK4-204ENST00000487068 SEC23AQ15436 765 aa11.92□□□□□ -0.5
NEK4-204ENST00000487068 USH1GQ495M9 461 aa11.92□□□□□ -0.5
NEK4-204ENST00000487068 CHST13Q8NET6 341 aa11.92□□□□□ -0.5
NEK4-204ENST00000487068 NUP133Q8WUM0 1156 aa11.92□□□□□ -0.5
NEK4-204ENST00000487068 USP6NLQ92738 828 aa11.92□□□□□ -0.5
NEK4-204ENST00000487068 TRERF1Q96PN7 1200 aa11.92□□□□□ -0.5
NEK4-204ENST00000487068 UBA5Q9GZZ9 404 aa11.92□□□□□ -0.5
NEK4-204ENST00000487068 CPVLQ9H3G5 476 aa11.92□□□□□ -0.5
NEK4-204ENST00000487068 FLRT1Q9NZU1 646 aa11.92□□□□□ -0.5
NEK4-204ENST00000487068 NR2E3Q9Y5X4 410 aa11.92□□□□□ -0.5
NEK4-204ENST00000487068 RPTORQ8N122 1335 aa11.91□□□□□ -0.5
NEK4-204ENST00000487068 COBLO75128 1261 aa11.91□□□□□ -0.5
NEK4-204ENST00000487068 TFRCP02786 760 aaKnown RBP11.91□□□□□ -0.5
NEK4-204ENST00000487068 ICAM1P05362 532 aa11.91□□□□□ -0.5
NEK4-204ENST00000487068 SNHG28P0DPA3 235 aa11.91□□□□□ -0.5
NEK4-204ENST00000487068 TAL1P17542 331 aaPredicted RBP11.91□□□□□ -0.5
NEK4-204ENST00000487068 CYP2C19P33261 490 aa11.91□□□□□ -0.5
NEK4-204ENST00000487068 ANTXR2P58335 489 aa11.91□□□□□ -0.5
NEK4-204ENST00000487068 CACNB2Q08289 660 aaPredicted RBP11.91□□□□□ -0.5
NEK4-204ENST00000487068 KRT32Q14532 448 aa11.91□□□□□ -0.5
NEK4-204ENST00000487068 CDC37Q16543 378 aaPredicted RBP11.91□□□□□ -0.5
NEK4-204ENST00000487068 TKFCQ3LXA3 575 aa11.91□□□□□ -0.5
NEK4-204ENST00000487068 TPRNQ4KMQ1 711 aa11.91□□□□□ -0.5
NEK4-204ENST00000487068 BTNL9Q6UXG8 535 aa11.91□□□□□ -0.5
NEK4-204ENST00000487068 NSMFQ6X4W1 530 aa11.91□□□□□ -0.5
NEK4-204ENST00000487068 CTCFLQ8NI51 663 aaPredicted RBP11.91□□□□□ -0.5
NEK4-204ENST00000487068 U2AF1L4Q8WU68 220 aaKnown RBP11.91□□□□□ -0.5
NEK4-204ENST00000487068 MAML3Q96JK9 1138 aa11.91□□□□□ -0.5
NEK4-204ENST00000487068 LRRC2Q9BYS8 371 aa11.91□□□□□ -0.5
NEK4-204ENST00000487068 RANBP17Q9H2T7 1088 aaKnown RBP11.91□□□□□ -0.5
NEK4-204ENST00000487068 VAT1LQ9HCJ6 419 aa11.91□□□□□ -0.5
NEK4-204ENST00000487068 NAP1L2Q9ULW6 460 aaPredicted RBP11.91□□□□□ -0.5
NEK4-204ENST00000487068 MYH7BA7E2Y1 1941 aa11.91□□□□□ -0.5
NEK4-204ENST00000487068 SZT2Q5T011 3432 aa11.91□□□□□ -0.5
NEK4-204ENST00000487068 PFASO15067 1338 aa11.9□□□□□ -0.5
NEK4-204ENST00000487068 ZNF536O15090 1300 aa11.9□□□□□ -0.5
NEK4-204ENST00000487068 HOXC6P09630 235 aa11.9□□□□□ -0.5
NEK4-204ENST00000487068 CCND3P30281 292 aaPredicted RBP11.9□□□□□ -0.5
NEK4-204ENST00000487068 UBE2Q1Q7Z7E8 422 aa11.9□□□□□ -0.5
NEK4-204ENST00000487068 HOMER1Q86YM7 354 aa11.9□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms