RNA–Protein interactions for RNA: ENST00000487010.1

COL3A1-206, Transcript of collagen type III alpha 1 chain, humanhuman

TSL 2

Gene COL3A1, Length 2,054 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL3A1-206ENST00000487010 NUP58Q9BVL2 599 aa13.67□□□□□ -0.22
COL3A1-206ENST00000487010 LACRTQ9GZZ8 138 aa13.67□□□□□ -0.22
COL3A1-206ENST00000487010 AGPAT5Q9NUQ2 364 aa13.67□□□□□ -0.22
COL3A1-206ENST00000487010 COL1A1P02452 1464 aaPredicted RBP13.67□□□□□ -0.22
COL3A1-206ENST00000487010 RREB1Q92766 1687 aa13.67□□□□□ -0.22
COL3A1-206ENST00000487010 PHLPP1O60346 1717 aa13.67□□□□□ -0.22
COL3A1-206ENST00000487010 ANO9A1A5B4 782 aa13.67□□□□□ -0.22
COL3A1-206ENST00000487010 RCCD1A6NED2 376 aa13.67□□□□□ -0.22
COL3A1-206ENST00000487010 RASSF10A6NK89 507 aa13.67□□□□□ -0.22
COL3A1-206ENST00000487010 B4DLN1 442 aa13.67□□□□□ -0.22
COL3A1-206ENST00000487010 RHOBTB3O94955 611 aa13.67□□□□□ -0.22
COL3A1-206ENST00000487010 MYL1P05976 194 aa13.67□□□□□ -0.22
COL3A1-206ENST00000487010 MAGEA9P43362 315 aa13.67□□□□□ -0.22
COL3A1-206ENST00000487010 EIF5P55010 431 aaKnown RBP13.67□□□□□ -0.22
COL3A1-206ENST00000487010 TTI2Q6NXR4 508 aa13.67□□□□□ -0.22
COL3A1-206ENST00000487010 CCNI2Q6ZMN8 369 aaPredicted RBP13.67□□□□□ -0.22
COL3A1-206ENST00000487010 RETREG2Q8NC44 543 aa13.67□□□□□ -0.22
COL3A1-206ENST00000487010 GIMAP8Q8ND71 665 aaPredicted RBP13.67□□□□□ -0.22
COL3A1-206ENST00000487010 PURBQ96QR8 312 aaKnown RBP13.67□□□□□ -0.22
COL3A1-206ENST00000487010 NHEJ1Q9H9Q4 299 aaPredicted RBP13.67□□□□□ -0.22
COL3A1-206ENST00000487010 EFCC1Q9HA90 598 aa13.67□□□□□ -0.22
COL3A1-206ENST00000487010 EXOC1Q9NV70 894 aa13.67□□□□□ -0.22
COL3A1-206ENST00000487010 ZNHIT6Q9NWK9 470 aaKnown RBP13.67□□□□□ -0.22
COL3A1-206ENST00000487010 SLAIN2Q9P270 581 aa13.67□□□□□ -0.22
COL3A1-206ENST00000487010 KAT6BQ8WYB5 2073 aa13.66□□□□□ -0.22
COL3A1-206ENST00000487010 PDE2AO00408 941 aaPredicted RBP13.66□□□□□ -0.22
COL3A1-206ENST00000487010 PPFIA4O75335 1185 aa13.66□□□□□ -0.22
COL3A1-206ENST00000487010 MAPK8IP2Q13387 824 aaPredicted RBP13.66□□□□□ -0.22
COL3A1-206ENST00000487010 FAM47AQ5JRC9 791 aa13.66□□□□□ -0.22
COL3A1-206ENST00000487010 DTHD1Q6ZMT9 781 aa13.66□□□□□ -0.22
COL3A1-206ENST00000487010 CAGE1Q8TC20 777 aa13.66□□□□□ -0.22
COL3A1-206ENST00000487010 ZNF384Q8TF68 577 aa13.66□□□□□ -0.22
COL3A1-206ENST00000487010 DHTKD1Q96HY7 919 aaPredicted RBP13.66□□□□□ -0.22
COL3A1-206ENST00000487010 DUSP9Q99956 384 aaKnown RBP13.66□□□□□ -0.22
COL3A1-206ENST00000487010 TUBGCP2Q9BSJ2 902 aa13.66□□□□□ -0.22
COL3A1-206ENST00000487010 FAM205AQ6ZU69 1335 aa13.66□□□□□ -0.22
COL3A1-206ENST00000487010 ZNF185O15231 689 aa13.65□□□□□ -0.22
COL3A1-206ENST00000487010 ZMYND10O75800 440 aa13.65□□□□□ -0.22
COL3A1-206ENST00000487010 TRIM21P19474 475 aaKnown RBP13.65□□□□□ -0.22
COL3A1-206ENST00000487010 GGCXP38435 758 aa13.65□□□□□ -0.22
COL3A1-206ENST00000487010 ZBED6P86452 979 aa13.65□□□□□ -0.22
COL3A1-206ENST00000487010 EVX2Q03828 476 aa13.65□□□□□ -0.22
COL3A1-206ENST00000487010 PARP10Q53GL7 1025 aa13.65□□□□□ -0.22
COL3A1-206ENST00000487010 CRACR2AQ9BSW2 395 aa13.65□□□□□ -0.22
COL3A1-206ENST00000487010 SH3GLB2Q9NR46 395 aa13.65□□□□□ -0.22
COL3A1-206ENST00000487010 KBTBD4Q9NVX7 518 aa13.65□□□□□ -0.22
COL3A1-206ENST00000487010 PCDHA4Q9UN74 947 aa13.65□□□□□ -0.22
COL3A1-206ENST00000487010 PP2D1A8MPX8 630 aa13.65□□□□□ -0.22
COL3A1-206ENST00000487010 IPO7O95373 1038 aaKnown RBP13.65□□□□□ -0.22
COL3A1-206ENST00000487010 MYBL2P10244 700 aa13.65□□□□□ -0.22
COL3A1-206ENST00000487010 CORO7P57737 925 aa13.65□□□□□ -0.22
COL3A1-206ENST00000487010 CSGALNACT2Q8N6G5 542 aa13.65□□□□□ -0.22
COL3A1-206ENST00000487010 RASSF8Q8NHQ8 419 aa13.65□□□□□ -0.22
COL3A1-206ENST00000487010 RIN2Q8WYP3 895 aaPredicted RBP13.65□□□□□ -0.22
COL3A1-206ENST00000487010 SELENOOQ9BVL4 669 aa13.65□□□□□ -0.22
COL3A1-206ENST00000487010 CCSER1Q9C0I3 900 aa13.65□□□□□ -0.22
COL3A1-206ENST00000487010 COL4A1P02462 1669 aa13.64□□□□□ -0.23
COL3A1-206ENST00000487010 LAMB2P55268 1798 aa13.64□□□□□ -0.23
COL3A1-206ENST00000487010 AGPSO00116 658 aa13.64□□□□□ -0.23
COL3A1-206ENST00000487010 NTSR2O95665 410 aa13.64□□□□□ -0.23
COL3A1-206ENST00000487010 IDEP14735 1019 aa13.64□□□□□ -0.23
COL3A1-206ENST00000487010 KIF5BP33176 963 aa13.64□□□□□ -0.23
COL3A1-206ENST00000487010 UBA7P41226 1012 aa13.64□□□□□ -0.23
COL3A1-206ENST00000487010 NOP2P46087 812 aaKnown RBP13.64□□□□□ -0.23
COL3A1-206ENST00000487010 KLK7P49862 253 aa13.64□□□□□ -0.23
COL3A1-206ENST00000487010 CDK17Q00537 523 aa13.64□□□□□ -0.23
COL3A1-206ENST00000487010 TBC1D8BQ0IIM8 1120 aa13.64□□□□□ -0.23
COL3A1-206ENST00000487010 IQCEQ6IPM2 695 aa13.64□□□□□ -0.23
COL3A1-206ENST00000487010 INTS5Q6P9B9 1019 aaKnown RBP13.64□□□□□ -0.23
COL3A1-206ENST00000487010 GSPT2Q8IYD1 628 aaKnown RBP13.64□□□□□ -0.23
COL3A1-206ENST00000487010 SMARCC1Q92922 1105 aaPredicted RBP13.64□□□□□ -0.23
COL3A1-206ENST00000487010 GDAP1L1Q96MZ0 367 aa13.64□□□□□ -0.23
COL3A1-206ENST00000487010 TMEM60Q9H2L4 133 aa13.64□□□□□ -0.23
COL3A1-206ENST00000487010 BTG4Q9NY30 223 aa13.64□□□□□ -0.23
COL3A1-206ENST00000487010 DUSP10Q9Y6W6 482 aa13.64□□□□□ -0.23
COL3A1-206ENST00000487010 WTIPA6NIX2 430 aaPredicted RBP13.63□□□□□ -0.23
COL3A1-206ENST00000487010 M0R2N6 131 aa13.63□□□□□ -0.23
COL3A1-206ENST00000487010 VAV2P52735 878 aa13.63□□□□□ -0.23
COL3A1-206ENST00000487010 C2orf54Q08AI8 447 aa13.63□□□□□ -0.23
COL3A1-206ENST00000487010 UBE4AQ14139 1066 aa13.63□□□□□ -0.23
COL3A1-206ENST00000487010 RASGRP4Q8TDF6 673 aa13.63□□□□□ -0.23
COL3A1-206ENST00000487010 PLIN2Q99541 437 aa13.63□□□□□ -0.23
COL3A1-206ENST00000487010 TSGA10Q9BZW7 698 aa13.63□□□□□ -0.23
COL3A1-206ENST00000487010 JADE2Q9NQC1 790 aa13.63□□□□□ -0.23
COL3A1-206ENST00000487010 LAMB1P07942 1786 aa13.63□□□□□ -0.23
COL3A1-206ENST00000487010 CCDC194A0A1B0GVG4 234 aa13.63□□□□□ -0.23
COL3A1-206ENST00000487010 A0A1W2PQJ5 194 aa13.63□□□□□ -0.23
COL3A1-206ENST00000487010 BICDL2A1A5D9 508 aa13.63□□□□□ -0.23
COL3A1-206ENST00000487010 MACROD2A1Z1Q3 448 aa13.63□□□□□ -0.23
COL3A1-206ENST00000487010 SHOX2O60902 331 aaPredicted RBP13.63□□□□□ -0.23
COL3A1-206ENST00000487010 CAMTA2O94983 1202 aa13.63□□□□□ -0.23
COL3A1-206ENST00000487010 CCNE1P24864 410 aa13.63□□□□□ -0.23
COL3A1-206ENST00000487010 CYP27A1Q02318 531 aa13.63□□□□□ -0.23
COL3A1-206ENST00000487010 KIF5AQ12840 1032 aa13.63□□□□□ -0.23
COL3A1-206ENST00000487010 CAVIN4Q5BKX8 364 aa13.63□□□□□ -0.23
COL3A1-206ENST00000487010 FIGNQ5HY92 759 aa13.63□□□□□ -0.23
COL3A1-206ENST00000487010 RCSD1Q6JBY9 416 aa13.63□□□□□ -0.23
COL3A1-206ENST00000487010 FNBP4Q8N3X1 1017 aaPredicted RBP13.63□□□□□ -0.23
COL3A1-206ENST00000487010 MMGT1Q8N4V1 131 aa13.63□□□□□ -0.23
COL3A1-206ENST00000487010 AENQ8WTP8 325 aaKnown RBP13.63□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms