RNA–Protein interactions for RNA: ENST00000486618.1

HDAC3-209, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 711 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-209ENST00000486618 ALPK3Q96L96 1907 aa8.3□□□□□ -1.08
HDAC3-209ENST00000486618 A0A0C4DFX4 3053 aa8.3□□□□□ -1.08
HDAC3-209ENST00000486618 FAM181BA6NEQ2 426 aa8.29□□□□□ -1.08
HDAC3-209ENST00000486618 CLGNO14967 610 aa8.29□□□□□ -1.08
HDAC3-209ENST00000486618 CTNND1O60716 968 aaKnown RBP8.29□□□□□ -1.08
HDAC3-209ENST00000486618 ENTPD3O75355 529 aa8.29□□□□□ -1.08
HDAC3-209ENST00000486618 HMGCRP04035 888 aa8.29□□□□□ -1.08
HDAC3-209ENST00000486618 LDHBP07195 334 aaKnown RBP8.29□□□□□ -1.08
HDAC3-209ENST00000486618 SLC5A1P13866 664 aa8.29□□□□□ -1.08
HDAC3-209ENST00000486618 PTPRAP18433 802 aa8.29□□□□□ -1.08
HDAC3-209ENST00000486618 CALRP27797 417 aaKnown RBP8.29□□□□□ -1.08
HDAC3-209ENST00000486618 NFIAQ12857 509 aa8.29□□□□□ -1.08
HDAC3-209ENST00000486618 FAM110CQ1W6H9 321 aa8.29□□□□□ -1.08
HDAC3-209ENST00000486618 TSGA10IPQ3SY00 556 aa8.29□□□□□ -1.08
HDAC3-209ENST00000486618 RABL6Q3YEC7 729 aaPredicted RBP8.29□□□□□ -1.08
HDAC3-209ENST00000486618 LONRF3Q496Y0 759 aa8.29□□□□□ -1.08
HDAC3-209ENST00000486618 ZSCAN29Q8IWY8 852 aaPredicted RBP8.29□□□□□ -1.08
HDAC3-209ENST00000486618 SMC5Q8IY18 1101 aa8.29□□□□□ -1.08
HDAC3-209ENST00000486618 TDHQ8IZJ6 230 aa8.29□□□□□ -1.08
HDAC3-209ENST00000486618 VWA5B2Q8N398 1253 aa8.29□□□□□ -1.08
HDAC3-209ENST00000486618 VGLL2Q8N8G2 317 aa8.29□□□□□ -1.08
HDAC3-209ENST00000486618 MRRFQ96E11 262 aaKnown RBP8.29□□□□□ -1.08
HDAC3-209ENST00000486618 KAZALD1Q96I82 304 aa8.29□□□□□ -1.08
HDAC3-209ENST00000486618 UBE2OQ9C0C9 1292 aaKnown RBP8.29□□□□□ -1.08
HDAC3-209ENST00000486618 BICC1Q9H694 974 aaKnown RBP8.29□□□□□ -1.08
HDAC3-209ENST00000486618 METTL14Q9HCE5 456 aaKnown RBP8.29□□□□□ -1.08
HDAC3-209ENST00000486618 RAB6BQ9NRW1 208 aa8.29□□□□□ -1.08
HDAC3-209ENST00000486618 MTMR10Q9NXD2 777 aa8.29□□□□□ -1.08
HDAC3-209ENST00000486618 KCNG1Q9UIX4 513 aa8.29□□□□□ -1.08
HDAC3-209ENST00000486618 PTPRFP10586 1907 aa8.29□□□□□ -1.08
HDAC3-209ENST00000486618 UTYO14607 1347 aa8.29□□□□□ -1.08
HDAC3-209ENST00000486618 RPTORQ8N122 1335 aa8.29□□□□□ -1.08
HDAC3-209ENST00000486618 PHF20L1A8MW92 1017 aa8.28□□□□□ -1.08
HDAC3-209ENST00000486618 RAB11FIP3O75154 756 aa8.28□□□□□ -1.08
HDAC3-209ENST00000486618 NBPF7P0C2Y1 421 aaPredicted RBP8.28□□□□□ -1.08
HDAC3-209ENST00000486618 FGFR2P21802 821 aa8.28□□□□□ -1.08
HDAC3-209ENST00000486618 MAGEA10P43363 369 aaPredicted RBP8.28□□□□□ -1.08
HDAC3-209ENST00000486618 GCLCP48506 637 aaPredicted RBP8.28□□□□□ -1.08
HDAC3-209ENST00000486618 PABPC4Q13310 644 aaKnown RBP eCLIP8.28□□□□□ -1.08
HDAC3-209ENST00000486618 SLFNL1Q499Z3 407 aa8.28□□□□□ -1.08
HDAC3-209ENST00000486618 TSHZ1Q6ZSZ6 1077 aa8.28□□□□□ -1.08
HDAC3-209ENST00000486618 Q7L0L9 218 aa8.28□□□□□ -1.08
HDAC3-209ENST00000486618 RNF135Q8IUD6 432 aa8.28□□□□□ -1.08
HDAC3-209ENST00000486618 ANKRD13CQ8N6S4 541 aa8.28□□□□□ -1.08
HDAC3-209ENST00000486618 DIS3LQ8TF46 1054 aaKnown RBP8.28□□□□□ -1.08
HDAC3-209ENST00000486618 LPIN2Q92539 896 aa8.28□□□□□ -1.08
HDAC3-209ENST00000486618 COL25A1Q9BXS0 654 aaPredicted RBP8.28□□□□□ -1.08
HDAC3-209ENST00000486618 IDI2Q9BXS1 227 aa8.28□□□□□ -1.08
HDAC3-209ENST00000486618 C11orf49Q9H6J7 331 aa8.28□□□□□ -1.08
HDAC3-209ENST00000486618 DOLKQ9UPQ8 538 aa8.28□□□□□ -1.08
HDAC3-209ENST00000486618 AGTPBP1Q9UPW5 1226 aa8.28□□□□□ -1.08
HDAC3-209ENST00000486618 COG6Q9Y2V7 657 aa8.28□□□□□ -1.08
HDAC3-209ENST00000486618 DOCK2Q92608 1830 aa8.27□□□□□ -1.09
HDAC3-209ENST00000486618 TRIM75PA6NK02 468 aa8.27□□□□□ -1.09
HDAC3-209ENST00000486618 SYN1P17600 705 aa8.27□□□□□ -1.09
HDAC3-209ENST00000486618 ARID4AP29374 1257 aaPredicted RBP8.27□□□□□ -1.09
HDAC3-209ENST00000486618 PRDX5P30044 214 aa8.27□□□□□ -1.09
HDAC3-209ENST00000486618 RGS3P49796 1198 aa8.27□□□□□ -1.09
HDAC3-209ENST00000486618 MAP3K10Q02779 954 aa8.27□□□□□ -1.09
HDAC3-209ENST00000486618 WDR78Q5VTH9 848 aa8.27□□□□□ -1.09
HDAC3-209ENST00000486618 SV2AQ7L0J3 742 aa8.27□□□□□ -1.09
HDAC3-209ENST00000486618 ZGPATQ8N5A5 531 aaKnown RBP8.27□□□□□ -1.09
HDAC3-209ENST00000486618 CNTNAP3BQ96NU0 1288 aa8.27□□□□□ -1.09
HDAC3-209ENST00000486618 CNTNAP3Q9BZ76 1288 aa8.27□□□□□ -1.09
HDAC3-209ENST00000486618 GRIP2Q9C0E4 1043 aa8.27□□□□□ -1.09
HDAC3-209ENST00000486618 CUEDC1Q9NWM3 386 aaPredicted RBP8.27□□□□□ -1.09
HDAC3-209ENST00000486618 KIAA1522Q9P206 1035 aaPredicted RBP8.27□□□□□ -1.09
HDAC3-209ENST00000486618 MYH2Q9UKX2 1941 aa8.27□□□□□ -1.09
HDAC3-209ENST00000486618 SALL1Q9NSC2 1324 aa8.27□□□□□ -1.09
HDAC3-209ENST00000486618 COL6A3P12111 3177 aa8.26□□□□□ -1.09
HDAC3-209ENST00000486618 EYA2O00167 538 aa8.26□□□□□ -1.09
HDAC3-209ENST00000486618 IL2RAP01589 272 aa8.26□□□□□ -1.09
HDAC3-209ENST00000486618 POU4F2Q12837 409 aa8.26□□□□□ -1.09
HDAC3-209ENST00000486618 MYBPC2Q14324 1141 aa8.26□□□□□ -1.09
HDAC3-209ENST00000486618 RNFT1Q5M7Z0 435 aa8.26□□□□□ -1.09
HDAC3-209ENST00000486618 PHF6Q8IWS0 365 aaKnown RBP eCLIP8.26□□□□□ -1.09
HDAC3-209ENST00000486618 ZFPM1Q8IX07 1006 aa8.26□□□□□ -1.09
HDAC3-209ENST00000486618 ANKRD44Q8N8A2 993 aa8.26□□□□□ -1.09
HDAC3-209ENST00000486618 MTA3Q9BTC8 594 aa8.26□□□□□ -1.09
HDAC3-209ENST00000486618 OGDHLQ9ULD0 1010 aa8.26□□□□□ -1.09
HDAC3-209ENST00000486618 DENND2AQ9ULE3 1009 aa8.26□□□□□ -1.09
HDAC3-209ENST00000486618 DOCK1Q14185 1865 aa8.26□□□□□ -1.09
HDAC3-209ENST00000486618 ATRNL1Q5VV63 1379 aa8.25□□□□□ -1.09
HDAC3-209ENST00000486618 FAM109BQ6ICB4 259 aaPredicted RBP8.25□□□□□ -1.09
HDAC3-209ENST00000486618 KRBA2Q6ZNG9 492 aa8.25□□□□□ -1.09
HDAC3-209ENST00000486618 RINLQ6ZS11 566 aa8.25□□□□□ -1.09
HDAC3-209ENST00000486618 KLHDC4Q8TBB5 520 aa8.25□□□□□ -1.09
HDAC3-209ENST00000486618 ESYT1Q9BSJ8 1104 aa8.25□□□□□ -1.09
HDAC3-209ENST00000486618 OSBPL5Q9H0X9 879 aaPredicted RBP8.25□□□□□ -1.09
HDAC3-209ENST00000486618 GJD2Q9UKL4 321 aa8.25□□□□□ -1.09
HDAC3-209ENST00000486618 IVNS1ABPQ9Y6Y0 642 aa8.25□□□□□ -1.09
HDAC3-209ENST00000486618 DDX60LQ5H9U9 1706 aaKnown RBP8.25□□□□□ -1.09
HDAC3-209ENST00000486618 PHIPQ8WWQ0 1821 aa8.24□□□□□ -1.09
HDAC3-209ENST00000486618 DDTLA6NHG4 134 aaPredicted RBP8.24□□□□□ -1.09
HDAC3-209ENST00000486618 SPATA31C2B4DYI2 1134 aa8.24□□□□□ -1.09
HDAC3-209ENST00000486618 ANP32CO43423 234 aa8.24□□□□□ -1.09
HDAC3-209ENST00000486618 SPP2Q13103 211 aa8.24□□□□□ -1.09
HDAC3-209ENST00000486618 SF3A1Q15459 793 aaKnown RBP8.24□□□□□ -1.09
HDAC3-209ENST00000486618 ATP2B3Q16720 1220 aa8.24□□□□□ -1.09
HDAC3-209ENST00000486618 OXLD1Q5BKU9 147 aa8.24□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms