RNA–Protein interactions for RNA: ENST00000486336.1

SNX21-211, Transcript of sorting nexin family member 21, humanhuman

TSL 3

Gene SNX21, Length 701 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX21-211ENST00000486336 PDHBP11177 359 aa12.95□□□□□ -0.34
SNX21-211ENST00000486336 DGKHQ86XP1 1220 aa12.95□□□□□ -0.34
SNX21-211ENST00000486336 TINF2Q9BSI4 451 aa12.95□□□□□ -0.34
SNX21-211ENST00000486336 UBAC1Q9BSL1 405 aa12.95□□□□□ -0.34
SNX21-211ENST00000486336 ACAD9Q9H845 621 aa12.95□□□□□ -0.34
SNX21-211ENST00000486336 RNF146Q9NTX7 359 aa12.95□□□□□ -0.34
SNX21-211ENST00000486336 CCPG1Q9ULG6 757 aa12.95□□□□□ -0.34
SNX21-211ENST00000486336 DIS3Q9Y2L1 958 aaKnown RBP12.95□□□□□ -0.34
SNX21-211ENST00000486336 NR2E3Q9Y5X4 410 aa12.95□□□□□ -0.34
SNX21-211ENST00000486336 MKI67P46013 3256 aaKnown RBP12.95□□□□□ -0.34
SNX21-211ENST00000486336 ZNF536O15090 1300 aa12.94□□□□□ -0.34
SNX21-211ENST00000486336 POTEB2H3BUK9 544 aa12.94□□□□□ -0.34
SNX21-211ENST00000486336 TAL1P17542 331 aaPredicted RBP12.94□□□□□ -0.34
SNX21-211ENST00000486336 NT5C2P49902 561 aa12.94□□□□□ -0.34
SNX21-211ENST00000486336 MNX1P50219 401 aaPredicted RBP12.94□□□□□ -0.34
SNX21-211ENST00000486336 ZNF543Q08ER8 600 aa12.94□□□□□ -0.34
SNX21-211ENST00000486336 TKFCQ3LXA3 575 aa12.94□□□□□ -0.34
SNX21-211ENST00000486336 PNMA1Q8ND90 353 aa12.94□□□□□ -0.34
SNX21-211ENST00000486336 UBA5Q9GZZ9 404 aa12.94□□□□□ -0.34
SNX21-211ENST00000486336 CNPY2Q9Y2B0 182 aa12.94□□□□□ -0.34
SNX21-211ENST00000486336 ZNF236Q9UL36 1845 aa12.94□□□□□ -0.34
SNX21-211ENST00000486336 TNKSO95271 1327 aa12.93□□□□□ -0.34
SNX21-211ENST00000486336 SEPT4O43236 478 aa12.93□□□□□ -0.34
SNX21-211ENST00000486336 IGHA2P01877 340 aa12.93□□□□□ -0.34
SNX21-211ENST00000486336 CYP21A2P08686 494 aa12.93□□□□□ -0.34
SNX21-211ENST00000486336 CNTN2Q02246 1040 aa12.93□□□□□ -0.34
SNX21-211ENST00000486336 MUM1L1Q5H9M0 696 aa12.93□□□□□ -0.34
SNX21-211ENST00000486336 GJC2Q5T442 439 aaPredicted RBP12.93□□□□□ -0.34
SNX21-211ENST00000486336 IFIT1BQ5T764 474 aaKnown RBP12.93□□□□□ -0.34
SNX21-211ENST00000486336 BTNL9Q6UXG8 535 aa12.93□□□□□ -0.34
SNX21-211ENST00000486336 NSMFQ6X4W1 530 aa12.93□□□□□ -0.34
SNX21-211ENST00000486336 CYB5R4Q7L1T6 521 aa12.93□□□□□ -0.34
SNX21-211ENST00000486336 RALYLQ86SE5 291 aaKnown RBP12.93□□□□□ -0.34
SNX21-211ENST00000486336 ENAHQ8N8S7 591 aaPredicted RBP12.93□□□□□ -0.34
SNX21-211ENST00000486336 SENP6Q9GZR1 1112 aaPredicted RBP12.93□□□□□ -0.34
SNX21-211ENST00000486336 RANBP17Q9H2T7 1088 aaKnown RBP12.93□□□□□ -0.34
SNX21-211ENST00000486336 ZHX1Q9UKY1 873 aaPredicted RBP12.93□□□□□ -0.34
SNX21-211ENST00000486336 RBM8AQ9Y5S9 174 aaKnown RBP12.93□□□□□ -0.34
SNX21-211ENST00000486336 DNAJC25-GNG10A0A024R161 153 aa12.92□□□□□ -0.34
SNX21-211ENST00000486336 DHX16O60231 1041 aaKnown RBP12.92□□□□□ -0.34
SNX21-211ENST00000486336 ICAM1P05362 532 aa12.92□□□□□ -0.34
SNX21-211ENST00000486336 C7orf61Q8IZ16 206 aa12.92□□□□□ -0.34
SNX21-211ENST00000486336 ARRDC4Q8NCT1 418 aa12.92□□□□□ -0.34
SNX21-211ENST00000486336 ANKS1AQ92625 1134 aa12.92□□□□□ -0.34
SNX21-211ENST00000486336 ESYT1Q9BSJ8 1104 aa12.92□□□□□ -0.34
SNX21-211ENST00000486336 CPVLQ9H3G5 476 aa12.92□□□□□ -0.34
SNX21-211ENST00000486336 VAT1LQ9HCJ6 419 aa12.92□□□□□ -0.34
SNX21-211ENST00000486336 LAMA4Q16363 1823 aa12.92□□□□□ -0.34
SNX21-211ENST00000486336 PLXNA1Q9UIW2 1896 aa12.91□□□□□ -0.34
SNX21-211ENST00000486336 ERICH2A1L162 156 aa12.91□□□□□ -0.34
SNX21-211ENST00000486336 KBTBD13C9JR72 458 aa12.91□□□□□ -0.34
SNX21-211ENST00000486336 E7EWF7 191 aa12.91□□□□□ -0.34
SNX21-211ENST00000486336 IFIT3O14879 490 aaKnown RBP12.91□□□□□ -0.34
SNX21-211ENST00000486336 SNAI1O95863 264 aaPredicted RBP12.91□□□□□ -0.34
SNX21-211ENST00000486336 PARP1P09874 1014 aaKnown RBP12.91□□□□□ -0.34
SNX21-211ENST00000486336 SNHG28P0DPA3 235 aa12.91□□□□□ -0.34
SNX21-211ENST00000486336 RARBP10826 455 aa12.91□□□□□ -0.34
SNX21-211ENST00000486336 GPATCH4Q5T3I0 446 aaKnown RBP12.91□□□□□ -0.34
SNX21-211ENST00000486336 CHST3Q7LGC8 479 aa12.91□□□□□ -0.34
SNX21-211ENST00000486336 NCOA7Q8NI08 942 aa12.91□□□□□ -0.34
SNX21-211ENST00000486336 MAP4K1Q92918 833 aa12.91□□□□□ -0.34
SNX21-211ENST00000486336 A1CFQ9NQ94 594 aaKnown RBP12.91□□□□□ -0.34
SNX21-211ENST00000486336 CDKN2AIPQ9NXV6 580 aaPredicted RBP12.91□□□□□ -0.34
SNX21-211ENST00000486336 NRBP1Q9UHY1 535 aa12.91□□□□□ -0.34
SNX21-211ENST00000486336 TAF6LQ9Y6J9 622 aa12.91□□□□□ -0.34
SNX21-211ENST00000486336 PFASO15067 1338 aa12.9□□□□□ -0.34
SNX21-211ENST00000486336 SYNGAP1Q96PV0 1343 aa12.9□□□□□ -0.34
SNX21-211ENST00000486336 PTPDC1A2A3K4 754 aa12.9□□□□□ -0.34
SNX21-211ENST00000486336 ZNF865P0CJ78 1059 aaPredicted RBP12.9□□□□□ -0.34
SNX21-211ENST00000486336 AKR1A1P14550 325 aa12.9□□□□□ -0.34
SNX21-211ENST00000486336 ATN1P54259 1190 aaPredicted RBP12.9□□□□□ -0.34
SNX21-211ENST00000486336 ACVR2BQ13705 512 aa12.9□□□□□ -0.34
SNX21-211ENST00000486336 USH1GQ495M9 461 aa12.9□□□□□ -0.34
SNX21-211ENST00000486336 BMP2KLQ5H9B9 411 aa12.9□□□□□ -0.34
SNX21-211ENST00000486336 CASC1Q6TDU7 716 aa12.9□□□□□ -0.34
SNX21-211ENST00000486336 MAMDC4Q6UXC1 1216 aa12.9□□□□□ -0.34
SNX21-211ENST00000486336 DHX30Q7L2E3 1194 aaKnown RBP eCLIP12.9□□□□□ -0.34
SNX21-211ENST00000486336 ARMCX2Q7L311 632 aa12.9□□□□□ -0.34
SNX21-211ENST00000486336 ZNF467Q7Z7K2 595 aaPredicted RBP12.9□□□□□ -0.34
SNX21-211ENST00000486336 MSL3Q8N5Y2 521 aaKnown RBP12.9□□□□□ -0.34
SNX21-211ENST00000486336 ANO2Q9NQ90 1003 aa12.9□□□□□ -0.34
SNX21-211ENST00000486336 XPNPEP3Q9NQH7 507 aa12.9□□□□□ -0.34
SNX21-211ENST00000486336 FAM184BQ9ULE4 1060 aa12.9□□□□□ -0.34
SNX21-211ENST00000486336 ZMYND8Q9ULU4 1186 aaPredicted RBP12.9□□□□□ -0.34
SNX21-211ENST00000486336 SMCHD1A6NHR9 2005 aa12.89□□□□□ -0.35
SNX21-211ENST00000486336 SOWAHBA6NEL2 793 aa12.89□□□□□ -0.35
SNX21-211ENST00000486336 ASB14A6NK59 587 aa12.89□□□□□ -0.35
SNX21-211ENST00000486336 DNM1LO00429 736 aa12.89□□□□□ -0.35
SNX21-211ENST00000486336 PGK1P00558 417 aa12.89□□□□□ -0.35
SNX21-211ENST00000486336 COL6A1P12109 1028 aa12.89□□□□□ -0.35
SNX21-211ENST00000486336 CALML3P27482 149 aa12.89□□□□□ -0.35
SNX21-211ENST00000486336 BAATQ14032 418 aaPredicted RBP12.89□□□□□ -0.35
SNX21-211ENST00000486336 WTAPQ15007 396 aa12.89□□□□□ -0.35
SNX21-211ENST00000486336 SART3Q15020 963 aaKnown RBP12.89□□□□□ -0.35
SNX21-211ENST00000486336 LRRC41Q15345 812 aa12.89□□□□□ -0.35
SNX21-211ENST00000486336 SEC23AQ15436 765 aa12.89□□□□□ -0.35
SNX21-211ENST00000486336 LRRC26Q2I0M4 334 aa12.89□□□□□ -0.35
SNX21-211ENST00000486336 ASPRV1Q53RT3 343 aa12.89□□□□□ -0.35
SNX21-211ENST00000486336 CHRDL2Q6WN34 429 aa12.89□□□□□ -0.35
SNX21-211ENST00000486336 STOX1Q6ZVD7 989 aa12.89□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms