RNA–Protein interactions for RNA: ENST00000486311.5

SREBF1-214, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 3

Gene SREBF1, Length 473 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-214ENST00000486311 ACVR2BQ13705 512 aa26.52■■□□□ 1.84
SREBF1-214ENST00000486311 KCTD1Q719H9 257 aa26.52■■□□□ 1.84
SREBF1-214ENST00000486311 CHMP4CQ96CF2 233 aa26.52■■□□□ 1.84
SREBF1-214ENST00000486311 AGBL1Q96MI9 1066 aa26.52■■□□□ 1.84
SREBF1-214ENST00000486311 TSEN34Q9BSV6 310 aaKnown RBP26.52■■□□□ 1.84
SREBF1-214ENST00000486311 PRDM5Q9NQX1 630 aaPredicted RBP26.52■■□□□ 1.84
SREBF1-214ENST00000486311 HOMER2Q9NSB8 354 aa26.52■■□□□ 1.84
SREBF1-214ENST00000486311 ZMYM6O95789 1325 aa26.51■■□□□ 1.83
SREBF1-214ENST00000486311 SYNRGQ9UMZ2 1314 aa26.51■■□□□ 1.83
SREBF1-214ENST00000486311 A0A1W2PQ45 241 aaPredicted RBP26.51■■□□□ 1.83
SREBF1-214ENST00000486311 A0A1W2PQY0 241 aa26.51■■□□□ 1.83
SREBF1-214ENST00000486311 HSPD1P10809 573 aaKnown RBP26.51■■□□□ 1.83
SREBF1-214ENST00000486311 TLE2Q04725 743 aa26.51■■□□□ 1.83
SREBF1-214ENST00000486311 NMIQ13287 307 aaPredicted RBP26.51■■□□□ 1.83
SREBF1-214ENST00000486311 TKFCQ3LXA3 575 aa26.51■■□□□ 1.83
SREBF1-214ENST00000486311 DEFB123Q8N688 67 aa26.51■■□□□ 1.83
SREBF1-214ENST00000486311 KLHDC9Q8NEP7 349 aa26.51■■□□□ 1.83
SREBF1-214ENST00000486311 ABHD16BQ9H3Z7 469 aa26.51■■□□□ 1.83
SREBF1-214ENST00000486311 COL6A3P12111 3177 aa26.51■■□□□ 1.83
SREBF1-214ENST00000486311 TRIM6-TRIM34B2RNG4 842 aa26.5■■□□□ 1.83
SREBF1-214ENST00000486311 DUSP11O75319 330 aaKnown RBP26.5■■□□□ 1.83
SREBF1-214ENST00000486311 ARMCX2Q7L311 632 aa26.5■■□□□ 1.83
SREBF1-214ENST00000486311 ZNF589Q86UQ0 364 aaPredicted RBP26.5■■□□□ 1.83
SREBF1-214ENST00000486311 RNF146Q9NTX7 359 aa26.5■■□□□ 1.83
SREBF1-214ENST00000486311 PRR12Q9ULL5 1215 aa26.5■■□□□ 1.83
SREBF1-214ENST00000486311 PLXNA1Q9UIW2 1896 aa26.5■■□□□ 1.83
SREBF1-214ENST00000486311 TRIM43BA6NCK2 446 aa26.49■■□□□ 1.83
SREBF1-214ENST00000486311 POTEB2H3BUK9 544 aa26.49■■□□□ 1.83
SREBF1-214ENST00000486311 B4GALNT3Q6L9W6 998 aa26.49■■□□□ 1.83
SREBF1-214ENST00000486311 RASGRP2Q7LDG7 609 aa26.49■■□□□ 1.83
SREBF1-214ENST00000486311 SH3RF1Q7Z6J0 888 aa26.49■■□□□ 1.83
SREBF1-214ENST00000486311 FAM133AQ8N9E0 248 aa26.49■■□□□ 1.83
SREBF1-214ENST00000486311 DCAF4Q8WV16 495 aa26.49■■□□□ 1.83
SREBF1-214ENST00000486311 TRIM43Q96BQ3 446 aaPredicted RBP26.49■■□□□ 1.83
SREBF1-214ENST00000486311 A1CFQ9NQ94 594 aaKnown RBP26.49■■□□□ 1.83
SREBF1-214ENST00000486311 CCDC171Q6TFL3 1326 aa26.48■■□□□ 1.83
SREBF1-214ENST00000486311 MOXD2PA6NHM9 499 aa26.48■■□□□ 1.83
SREBF1-214ENST00000486311 ACLYP53396 1101 aa26.48■■□□□ 1.83
SREBF1-214ENST00000486311 CNTN2Q02246 1040 aa26.48■■□□□ 1.83
SREBF1-214ENST00000486311 CCSAPQ6IQ19 270 aaPredicted RBP26.48■■□□□ 1.83
SREBF1-214ENST00000486311 Q7L0L9 218 aa26.48■■□□□ 1.83
SREBF1-214ENST00000486311 CHD1LQ86WJ1 897 aa26.48■■□□□ 1.83
SREBF1-214ENST00000486311 CCDC144CPQ8IYA2 1237 aa26.48■■□□□ 1.83
SREBF1-214ENST00000486311 SLC17A8Q8NDX2 589 aa26.48■■□□□ 1.83
SREBF1-214ENST00000486311 BADQ92934 168 aa26.48■■□□□ 1.83
SREBF1-214ENST00000486311 RILPL2Q969X0 211 aa26.48■■□□□ 1.83
SREBF1-214ENST00000486311 TRERF1Q96PN7 1200 aa26.48■■□□□ 1.83
SREBF1-214ENST00000486311 KATNBL1Q9H079 304 aa26.48■■□□□ 1.83
SREBF1-214ENST00000486311 TOMM22Q9NS69 142 aa26.48■■□□□ 1.83
SREBF1-214ENST00000486311 TCP11L1Q9NUJ3 509 aa26.48■■□□□ 1.83
SREBF1-214ENST00000486311 SMCHD1A6NHR9 2005 aa26.48■■□□□ 1.83
SREBF1-214ENST00000486311 CST5P28325 142 aaPredicted RBP26.47■■□□□ 1.83
SREBF1-214ENST00000486311 NUCB1Q02818 461 aa26.47■■□□□ 1.83
SREBF1-214ENST00000486311 CCDC144BQ3MJ40 725 aa26.47■■□□□ 1.83
SREBF1-214ENST00000486311 RRP12Q5JTH9 1297 aaKnown RBP26.47■■□□□ 1.83
SREBF1-214ENST00000486311 CCDC174Q6PII3 467 aa26.47■■□□□ 1.83
SREBF1-214ENST00000486311 OSBPL3Q9H4L5 887 aa26.47■■□□□ 1.83
SREBF1-214ENST00000486311 ADCY6O43306 1168 aa26.46■■□□□ 1.83
SREBF1-214ENST00000486311 IGHDP01880 384 aa26.46■■□□□ 1.83
SREBF1-214ENST00000486311 CLTBP09497 229 aa26.46■■□□□ 1.83
SREBF1-214ENST00000486311 TOP1P11387 765 aaKnown RBP26.46■■□□□ 1.83
SREBF1-214ENST00000486311 ALAS1P13196 640 aa26.46■■□□□ 1.83
SREBF1-214ENST00000486311 SNAP25P60880 206 aa26.46■■□□□ 1.83
SREBF1-214ENST00000486311 KCNA10Q16322 511 aa26.46■■□□□ 1.83
SREBF1-214ENST00000486311 CCDC96Q2M329 555 aa26.46■■□□□ 1.83
SREBF1-214ENST00000486311 PLEKHM2Q8IWE5 1019 aa26.46■■□□□ 1.83
SREBF1-214ENST00000486311 NUP133Q8WUM0 1156 aa26.46■■□□□ 1.83
SREBF1-214ENST00000486311 TMEM47Q9BQJ4 181 aa26.46■■□□□ 1.83
SREBF1-214ENST00000486311 UPF3AQ9H1J1 476 aaKnown RBP26.46■■□□□ 1.83
SREBF1-214ENST00000486311 STARD7Q9NQZ5 370 aa26.46■■□□□ 1.83
SREBF1-214ENST00000486311 MTMR7Q9Y216 660 aa26.46■■□□□ 1.83
SREBF1-214ENST00000486311 MYADML2A6NDP7 307 aa26.45■■□□□ 1.82
SREBF1-214ENST00000486311 SOWAHBA6NEL2 793 aa26.45■■□□□ 1.82
SREBF1-214ENST00000486311 PCP11498 1178 aaKnown RBP26.45■■□□□ 1.82
SREBF1-214ENST00000486311 SDSP20132 328 aa26.45■■□□□ 1.82
SREBF1-214ENST00000486311 BTNL9Q6UXG8 535 aa26.45■■□□□ 1.82
SREBF1-214ENST00000486311 MTMR10Q9NXD2 777 aa26.45■■□□□ 1.82
SREBF1-214ENST00000486311 KIAA0355O15063 1070 aa26.44■■□□□ 1.82
SREBF1-214ENST00000486311 PQBP1O60828 265 aaKnown RBP26.44■■□□□ 1.82
SREBF1-214ENST00000486311 MFAP1P55081 439 aaKnown RBP26.44■■□□□ 1.82
SREBF1-214ENST00000486311 GJA9P57773 515 aa26.44■■□□□ 1.82
SREBF1-214ENST00000486311 HAND2P61296 217 aa26.44■■□□□ 1.82
SREBF1-214ENST00000486311 ANKRD33Q7Z3H0 272 aa26.44■■□□□ 1.82
SREBF1-214ENST00000486311 EXOC6Q8TAG9 804 aa26.44■■□□□ 1.82
SREBF1-214ENST00000486311 TOX2Q96NM4 488 aa26.44■■□□□ 1.82
SREBF1-214ENST00000486311 RANBP17Q9H2T7 1088 aaKnown RBP26.44■■□□□ 1.82
SREBF1-214ENST00000486311 SPC25Q9HBM1 224 aa26.44■■□□□ 1.82
SREBF1-214ENST00000486311 CCPG1Q9ULG6 757 aa26.44■■□□□ 1.82
SREBF1-214ENST00000486311 LTBP2Q14767 1821 aa26.44■■□□□ 1.82
SREBF1-214ENST00000486311 ASB14A6NK59 587 aa26.43■■□□□ 1.82
SREBF1-214ENST00000486311 ICAM1P05362 532 aa26.43■■□□□ 1.82
SREBF1-214ENST00000486311 C6orf222P0C671 652 aaPredicted RBP26.43■■□□□ 1.82
SREBF1-214ENST00000486311 SHHQ15465 462 aa26.43■■□□□ 1.82
SREBF1-214ENST00000486311 MUM1L1Q5H9M0 696 aa26.43■■□□□ 1.82
SREBF1-214ENST00000486311 AKNAD1Q5T1N1 836 aa26.43■■□□□ 1.82
SREBF1-214ENST00000486311 TTBK2Q6IQ55 1244 aa26.43■■□□□ 1.82
SREBF1-214ENST00000486311 PCSK9Q8NBP7 692 aaKnown RBP26.43■■□□□ 1.82
SREBF1-214ENST00000486311 CYP39A1Q9NYL5 469 aa26.43■■□□□ 1.82
SREBF1-214ENST00000486311 ELP1O95163 1332 aa26.42■■□□□ 1.82
SREBF1-214ENST00000486311 LAMA2P24043 3122 aaKnown RBP26.42■■□□□ 1.82
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms