RNA–Protein interactions for RNA: ENST00000486211.1

XRN1-212, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 2

Gene XRN1, Length 1,180 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-212ENST00000486211 SIL1Q9H173 461 aa10.2□□□□□ -0.78
XRN1-212ENST00000486211 MROH8Q9H579 483 aa10.2□□□□□ -0.78
XRN1-212ENST00000486211 PALD1Q9ULE6 856 aa10.2□□□□□ -0.78
XRN1-212ENST00000486211 ZDBF2Q9HCK1 2354 aa10.19□□□□□ -0.78
XRN1-212ENST00000486211 A0A0U1RQG5 324 aaPredicted RBP10.19□□□□□ -0.78
XRN1-212ENST00000486211 ATP2A2P16615 1042 aaKnown RBP10.19□□□□□ -0.78
XRN1-212ENST00000486211 TAP1Q03518 808 aa10.19□□□□□ -0.78
XRN1-212ENST00000486211 GRB10Q13322 594 aa10.19□□□□□ -0.78
XRN1-212ENST00000486211 COG2Q14746 738 aa10.19□□□□□ -0.78
XRN1-212ENST00000486211 ZNF792Q3KQV3 632 aa10.19□□□□□ -0.78
XRN1-212ENST00000486211 TATDN1Q6P1N9 297 aa10.19□□□□□ -0.78
XRN1-212ENST00000486211 PI16Q6UXB8 463 aa10.19□□□□□ -0.78
XRN1-212ENST00000486211 TBC1D9Q6ZT07 1266 aa10.19□□□□□ -0.78
XRN1-212ENST00000486211 HFE2Q6ZVN8 426 aa10.19□□□□□ -0.78
XRN1-212ENST00000486211 MAPKAPK5Q8IW41 473 aa10.19□□□□□ -0.78
XRN1-212ENST00000486211 CDCA7LQ96GN5 454 aa10.19□□□□□ -0.78
XRN1-212ENST00000486211 GLT1D1Q96MS3 346 aa10.19□□□□□ -0.78
XRN1-212ENST00000486211 WNT8AQ9H1J5 351 aa10.19□□□□□ -0.78
XRN1-212ENST00000486211 ZNFX1Q9P2E3 1918 aaKnown RBP10.19□□□□□ -0.78
XRN1-212ENST00000486211 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP10.18□□□□□ -0.78
XRN1-212ENST00000486211 DCXO43602 365 aa10.18□□□□□ -0.78
XRN1-212ENST00000486211 PGK2P07205 417 aa10.18□□□□□ -0.78
XRN1-212ENST00000486211 ASGR1P07306 291 aa10.18□□□□□ -0.78
XRN1-212ENST00000486211 FCER1AP12319 257 aa10.18□□□□□ -0.78
XRN1-212ENST00000486211 IL9P15248 144 aa10.18□□□□□ -0.78
XRN1-212ENST00000486211 PPP4CP60510 307 aa10.18□□□□□ -0.78
XRN1-212ENST00000486211 TIMM10P62072 90 aa10.18□□□□□ -0.78
XRN1-212ENST00000486211 LEXMQ3ZCV2 418 aa10.18□□□□□ -0.78
XRN1-212ENST00000486211 TMEM67Q5HYA8 995 aa10.18□□□□□ -0.78
XRN1-212ENST00000486211 SPRED2Q7Z698 418 aa10.18□□□□□ -0.78
XRN1-212ENST00000486211 NCAPG2Q86XI2 1143 aa10.18□□□□□ -0.78
XRN1-212ENST00000486211 PRSS33Q8NF86 280 aa10.18□□□□□ -0.78
XRN1-212ENST00000486211 GADD45GIP1Q8TAE8 222 aaPredicted RBP10.18□□□□□ -0.78
XRN1-212ENST00000486211 TGFBRAP1Q8WUH2 860 aa10.18□□□□□ -0.78
XRN1-212ENST00000486211 ARNTL2Q8WYA1 636 aa10.18□□□□□ -0.78
XRN1-212ENST00000486211 TRIM34Q9BYJ4 488 aa10.18□□□□□ -0.78
XRN1-212ENST00000486211 HIPK3Q9H422 1215 aa10.18□□□□□ -0.78
XRN1-212ENST00000486211 HOXC10Q9NYD6 342 aa10.18□□□□□ -0.78
XRN1-212ENST00000486211 HMG20BQ9P0W2 317 aa10.18□□□□□ -0.78
XRN1-212ENST00000486211 DIS3Q9Y2L1 958 aaKnown RBP10.18□□□□□ -0.78
XRN1-212ENST00000486211 TLR3O15455 904 aaKnown RBP10.17□□□□□ -0.78
XRN1-212ENST00000486211 ADCY6O43306 1168 aa10.17□□□□□ -0.78
XRN1-212ENST00000486211 SSTR3P32745 418 aaPredicted RBP10.17□□□□□ -0.78
XRN1-212ENST00000486211 GUCY1A2P33402 732 aa10.17□□□□□ -0.78
XRN1-212ENST00000486211 IL15P40933 162 aaPredicted RBP10.17□□□□□ -0.78
XRN1-212ENST00000486211 CCL23P55773 120 aa10.17□□□□□ -0.78
XRN1-212ENST00000486211 RAB3GAP1Q15042 981 aa10.17□□□□□ -0.78
XRN1-212ENST00000486211 MB21D1Q8N884 522 aa10.17□□□□□ -0.78
XRN1-212ENST00000486211 SLC43A3Q8NBI5 491 aa10.17□□□□□ -0.78
XRN1-212ENST00000486211 NOC4LQ9BVI4 516 aaKnown RBP10.17□□□□□ -0.78
XRN1-212ENST00000486211 UPF3AQ9H1J1 476 aaKnown RBP10.17□□□□□ -0.78
XRN1-212ENST00000486211 UBE2ZQ9H832 354 aaPredicted RBP10.17□□□□□ -0.78
XRN1-212ENST00000486211 AATFQ9NY61 560 aaKnown RBP eCLIP10.17□□□□□ -0.78
XRN1-212ENST00000486211 SAP30BPQ9UHR5 308 aaKnown RBP10.17□□□□□ -0.78
XRN1-212ENST00000486211 A0A1W2PRG0 241 aa10.16□□□□□ -0.78
XRN1-212ENST00000486211 ZBBXA8MT70 800 aa10.16□□□□□ -0.78
XRN1-212ENST00000486211 CTAGE5O15320 804 aa10.16□□□□□ -0.78
XRN1-212ENST00000486211 DUSP11O75319 330 aaKnown RBP10.16□□□□□ -0.78
XRN1-212ENST00000486211 SNAI1O95863 264 aaPredicted RBP10.16□□□□□ -0.78
XRN1-212ENST00000486211 PRSS12P56730 875 aa10.16□□□□□ -0.78
XRN1-212ENST00000486211 TTLL4Q14679 1199 aa10.16□□□□□ -0.78
XRN1-212ENST00000486211 KIAA1755Q5JYT7 1200 aa10.16□□□□□ -0.78
XRN1-212ENST00000486211 ADGRA1Q86SQ6 560 aa10.16□□□□□ -0.78
XRN1-212ENST00000486211 SPATA5Q8NB90 893 aa10.16□□□□□ -0.78
XRN1-212ENST00000486211 PCSK9Q8NBP7 692 aaKnown RBP10.16□□□□□ -0.78
XRN1-212ENST00000486211 XAGE2Q96GT9 111 aa10.16□□□□□ -0.78
XRN1-212ENST00000486211 RAI14Q9P0K7 980 aa10.16□□□□□ -0.78
XRN1-212ENST00000486211 PARP14Q460N5 1801 aa10.15□□□□□ -0.78
XRN1-212ENST00000486211 A0A1B0GUL7 405 aa10.15□□□□□ -0.78
XRN1-212ENST00000486211 SMAPO00193 183 aa10.15□□□□□ -0.78
XRN1-212ENST00000486211 HLA-DOAP06340 250 aa10.15□□□□□ -0.78
XRN1-212ENST00000486211 C6orf222P0C671 652 aaPredicted RBP10.15□□□□□ -0.78
XRN1-212ENST00000486211 PLS1Q14651 629 aa10.15□□□□□ -0.78
XRN1-212ENST00000486211 TMEM132BQ14DG7 1078 aa10.15□□□□□ -0.78
XRN1-212ENST00000486211 VTI1AQ96AJ9 217 aa10.15□□□□□ -0.78
XRN1-212ENST00000486211 ATG4CQ96DT6 458 aa10.15□□□□□ -0.78
XRN1-212ENST00000486211 AGBL1Q96MI9 1066 aa10.15□□□□□ -0.78
XRN1-212ENST00000486211 MMP19Q99542 508 aa10.15□□□□□ -0.78
XRN1-212ENST00000486211 LMCD1Q9NZU5 365 aa10.15□□□□□ -0.78
XRN1-212ENST00000486211 FAM184BQ9ULE4 1060 aa10.15□□□□□ -0.78
XRN1-212ENST00000486211 PA2G4Q9UQ80 394 aaKnown RBP10.15□□□□□ -0.78
XRN1-212ENST00000486211 CNPY2Q9Y2B0 182 aa10.15□□□□□ -0.78
XRN1-212ENST00000486211 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP10.15□□□□□ -0.78
XRN1-212ENST00000486211 GRIN2DO15399 1336 aa10.14□□□□□ -0.79
XRN1-212ENST00000486211 SLC25A27O95847 323 aa10.14□□□□□ -0.79
XRN1-212ENST00000486211 GJA9P57773 515 aa10.14□□□□□ -0.79
XRN1-212ENST00000486211 NKX3-2P78367 333 aa10.14□□□□□ -0.79
XRN1-212ENST00000486211 TCF15Q12870 199 aa10.14□□□□□ -0.79
XRN1-212ENST00000486211 MVPQ14764 893 aaKnown RBP10.14□□□□□ -0.79
XRN1-212ENST00000486211 ABCB5Q2M3G0 1257 aa10.14□□□□□ -0.79
XRN1-212ENST00000486211 PTCRAQ6ISU1 281 aaPredicted RBP10.14□□□□□ -0.79
XRN1-212ENST00000486211 ATF7IPQ6VMQ6 1270 aa10.14□□□□□ -0.79
XRN1-212ENST00000486211 RPUSD2Q8IZ73 545 aaKnown RBP10.14□□□□□ -0.79
XRN1-212ENST00000486211 SCLYQ96I15 445 aa10.14□□□□□ -0.79
XRN1-212ENST00000486211 MFSD14AQ96MC6 490 aa10.14□□□□□ -0.79
XRN1-212ENST00000486211 TANGO6Q9C0B7 1094 aa10.14□□□□□ -0.79
XRN1-212ENST00000486211 EHD4Q9H223 541 aa10.14□□□□□ -0.79
XRN1-212ENST00000486211 SPTBN4Q9H254 2564 aa10.14□□□□□ -0.79
XRN1-212ENST00000486211 COL11A1P12107 1806 aaPredicted RBP10.13□□□□□ -0.79
XRN1-212ENST00000486211 GFRA3O60609 400 aa10.13□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms