RNA–Protein interactions for RNA: ENST00000485567.1

FN1-222, Transcript of fibronectin 1, human

TSL 1 (best)

Gene FN1, Length 584 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
FN1-222	ENST00000485567	MAMDC2	Q7Z304	686 aa	Predicted RBP	5.74	□□□□□ -1.49
FN1-222	ENST00000485567	RPUSD2	Q8IZ73	545 aa	Known RBP	5.74	□□□□□ -1.49
FN1-222	ENST00000485567	TMEM145	Q8NBT3	493 aa		5.74	□□□□□ -1.49
FN1-222	ENST00000485567	SLC7A14	Q8TBB6	771 aa		5.74	□□□□□ -1.49
FN1-222	ENST00000485567	COPS5	Q92905	334 aa		5.74	□□□□□ -1.49
FN1-222	ENST00000485567	TP53INP1	Q96A56	240 aa		5.74	□□□□□ -1.49
FN1-222	ENST00000485567	C1orf159	Q96HA4	380 aa		5.74	□□□□□ -1.49
FN1-222	ENST00000485567	DUSP15	Q9H1R2	295 aa	Predicted RBP	5.74	□□□□□ -1.49
FN1-222	ENST00000485567	TRIT1	Q9H3H1	467 aa	Known RBP	5.74	□□□□□ -1.49
FN1-222	ENST00000485567	TRIM39	Q9HCM9	518 aa		5.74	□□□□□ -1.49
FN1-222	ENST00000485567	SFMBT1	Q9UHJ3	866 aa		5.74	□□□□□ -1.49
FN1-222	ENST00000485567	RNF112	Q9ULX5	631 aa		5.74	□□□□□ -1.49
FN1-222	ENST00000485567	GPR55	Q9Y2T6	319 aa	Predicted RBP	5.74	□□□□□ -1.49
FN1-222	ENST00000485567	FAM170B	A6NMN3	283 aa		5.73	□□□□□ -1.49
FN1-222	ENST00000485567	GSG1L2	A8MUP6	293 aa		5.73	□□□□□ -1.49
FN1-222	ENST00000485567	AURKA	O14965	403 aa		5.73	□□□□□ -1.49
FN1-222	ENST00000485567	NPTXR	O95502	500 aa		5.73	□□□□□ -1.49
FN1-222	ENST00000485567	POU3F2	P20265	443 aa	Predicted RBP	5.73	□□□□□ -1.49
FN1-222	ENST00000485567	BMP8B	P34820	402 aa		5.73	□□□□□ -1.49
FN1-222	ENST00000485567	CTSK	P43235	329 aa		5.73	□□□□□ -1.49
FN1-222	ENST00000485567	KCNJ6	P48051	423 aa		5.73	□□□□□ -1.49
FN1-222	ENST00000485567	CYP4F3	Q08477	520 aa		5.73	□□□□□ -1.49
FN1-222	ENST00000485567	NTRK3	Q16288	839 aa		5.73	□□□□□ -1.49
FN1-222	ENST00000485567	AHI1	Q8N157	1196 aa		5.73	□□□□□ -1.49
FN1-222	ENST00000485567	KREMEN2	Q8NCW0	462 aa		5.73	□□□□□ -1.49
FN1-222	ENST00000485567	DCAF4	Q8WV16	495 aa		5.73	□□□□□ -1.49
FN1-222	ENST00000485567	DDX1	Q92499	740 aa	Known RBP	5.73	□□□□□ -1.49
FN1-222	ENST00000485567	METTL14	Q9HCE5	456 aa	Known RBP	5.73	□□□□□ -1.49
FN1-222	ENST00000485567	TYW1	Q9NV66	732 aa	Known RBP	5.73	□□□□□ -1.49
FN1-222	ENST00000485567	GPATCH2	Q9NW75	528 aa		5.73	□□□□□ -1.49
FN1-222	ENST00000485567	NDOR1	Q9UHB4	597 aa		5.73	□□□□□ -1.49
FN1-222	ENST00000485567	ST14	Q9Y5Y6	855 aa		5.73	□□□□□ -1.49
FN1-222	ENST00000485567	LOC101059915	A0A1B0GWI6	518 aa	Predicted RBP	5.72	□□□□□ -1.49
FN1-222	ENST00000485567	SHISA3	A0PJX4	238 aa		5.72	□□□□□ -1.49
FN1-222	ENST00000485567	FAM155A	B1AL88	458 aa	Predicted RBP	5.72	□□□□□ -1.49
FN1-222	ENST00000485567	PDE8A	O60658	829 aa		5.72	□□□□□ -1.49
FN1-222	ENST00000485567	RAB11FIP3	O75154	756 aa		5.72	□□□□□ -1.49
FN1-222	ENST00000485567	DNAJC8	O75937	253 aa	Predicted RBP	5.72	□□□□□ -1.49
FN1-222	ENST00000485567	ASL	P04424	464 aa		5.72	□□□□□ -1.49
FN1-222	ENST00000485567	F13B	P05160	661 aa		5.72	□□□□□ -1.49
FN1-222	ENST00000485567	NAT1	P18440	290 aa		5.72	□□□□□ -1.49
FN1-222	ENST00000485567	SDS	P20132	328 aa		5.72	□□□□□ -1.49
FN1-222	ENST00000485567	OXCT1	P55809	520 aa		5.72	□□□□□ -1.49
FN1-222	ENST00000485567	CPSF6	Q16630	551 aa	Known RBP eCLIP	5.72	□□□□□ -1.49
FN1-222	ENST00000485567	ACBD5	Q5T8D3	534 aa	Predicted RBP	5.72	□□□□□ -1.49
FN1-222	ENST00000485567	STYK1	Q6J9G0	422 aa		5.72	□□□□□ -1.49
FN1-222	ENST00000485567	RSPO2	Q6UXX9	243 aa	Predicted RBP	5.72	□□□□□ -1.49
FN1-222	ENST00000485567	ZNF765	Q7L2R6	523 aa		5.72	□□□□□ -1.49
FN1-222	ENST00000485567	RNF180	Q86T96	592 aa		5.72	□□□□□ -1.49
FN1-222	ENST00000485567	SLC51A	Q86UW1	340 aa		5.72	□□□□□ -1.49
FN1-222	ENST00000485567	LRRTM3	Q86VH5	581 aa		5.72	□□□□□ -1.49
FN1-222	ENST00000485567	LINC00116	Q8NCU8	138 aa		5.72	□□□□□ -1.49
FN1-222	ENST00000485567	TCTN2	Q96GX1	697 aa		5.72	□□□□□ -1.49
FN1-222	ENST00000485567	MFSD14A	Q96MC6	490 aa		5.72	□□□□□ -1.49
FN1-222	ENST00000485567	ZFYVE21	Q9BQ24	234 aa		5.72	□□□□□ -1.49
FN1-222	ENST00000485567	MCMBP	Q9BTE3	642 aa		5.72	□□□□□ -1.49
FN1-222	ENST00000485567	METTL22	Q9BUU2	404 aa	Predicted RBP	5.72	□□□□□ -1.49
FN1-222	ENST00000485567	SLC52A2	Q9HAB3	445 aa		5.72	□□□□□ -1.49
FN1-222	ENST00000485567	MINPP1	Q9UNW1	487 aa		5.72	□□□□□ -1.49
FN1-222	ENST00000485567	BACE2	Q9Y5Z0	518 aa		5.72	□□□□□ -1.49
FN1-222	ENST00000485567	C2orf71	A6NGG8	1288 aa		5.71	□□□□□ -1.5
FN1-222	ENST00000485567	RBAK-RBAKDN	I3L0D1	243 aa		5.71	□□□□□ -1.5
FN1-222	ENST00000485567	AQP7	O14520	342 aa		5.71	□□□□□ -1.5
FN1-222	ENST00000485567	GSC2	O15499	205 aa		5.71	□□□□□ -1.5
FN1-222	ENST00000485567	VAV1	P15498	845 aa		5.71	□□□□□ -1.5
FN1-222	ENST00000485567	CNGA1	P29973	690 aa		5.71	□□□□□ -1.5
FN1-222	ENST00000485567	ECI1	P42126	302 aa		5.71	□□□□□ -1.5
FN1-222	ENST00000485567	SCRN1	Q12765	414 aa		5.71	□□□□□ -1.5
FN1-222	ENST00000485567	NFIA	Q12857	509 aa		5.71	□□□□□ -1.5
FN1-222	ENST00000485567	NKPD1	Q17RQ9	610 aa		5.71	□□□□□ -1.5
FN1-222	ENST00000485567	DPY19L1	Q2PZI1	675 aa		5.71	□□□□□ -1.5
FN1-222	ENST00000485567	DENND5A	Q6IQ26	1287 aa		5.71	□□□□□ -1.5
FN1-222	ENST00000485567	RCSD1	Q6JBY9	416 aa		5.71	□□□□□ -1.5
FN1-222	ENST00000485567	BRAP	Q7Z569	592 aa		5.71	□□□□□ -1.5
FN1-222	ENST00000485567	THAP5	Q7Z6K1	395 aa		5.71	□□□□□ -1.5
FN1-222	ENST00000485567	TSPYL5	Q86VY4	417 aa	Predicted RBP	5.71	□□□□□ -1.5
FN1-222	ENST00000485567	SHISA5	Q8N114	240 aa		5.71	□□□□□ -1.5
FN1-222	ENST00000485567	PPM1K	Q8N3J5	372 aa		5.71	□□□□□ -1.5
FN1-222	ENST00000485567	NPLOC4	Q8TAT6	608 aa		5.71	□□□□□ -1.5
FN1-222	ENST00000485567	MAGEB10	Q96LZ2	347 aa	Predicted RBP	5.71	□□□□□ -1.5
FN1-222	ENST00000485567	FCRL3	Q96P31	734 aa	Predicted RBP	5.71	□□□□□ -1.5
FN1-222	ENST00000485567	DBNDD2	Q9BQY9	259 aa		5.71	□□□□□ -1.5
FN1-222	ENST00000485567	TARS2	Q9BW92	718 aa	Known RBP	5.71	□□□□□ -1.5
FN1-222	ENST00000485567	DDX56	Q9NY93	547 aa	Known RBP	5.71	□□□□□ -1.5
FN1-222	ENST00000485567	NPFFR2	Q9Y5X5	522 aa		5.71	□□□□□ -1.5
FN1-222	ENST00000485567	BLACE	A4D250	179 aa		5.7	□□□□□ -1.5
FN1-222	ENST00000485567	MEIS1	O00470	390 aa		5.7	□□□□□ -1.5
FN1-222	ENST00000485567	ZNF205	O95201	554 aa		5.7	□□□□□ -1.5
FN1-222	ENST00000485567	CD3E	P07766	207 aa		5.7	□□□□□ -1.5
FN1-222	ENST00000485567	H2AFB1	P0C5Y9	115 aa		5.7	□□□□□ -1.5
FN1-222	ENST00000485567	H2AFB2	P0C5Z0	115 aa		5.7	□□□□□ -1.5
FN1-222	ENST00000485567	POU3F3	P20264	500 aa	Predicted RBP	5.7	□□□□□ -1.5
FN1-222	ENST00000485567	ENDOU	P21128	410 aa	Known RBP	5.7	□□□□□ -1.5
FN1-222	ENST00000485567	CLCN7	P51798	805 aa		5.7	□□□□□ -1.5
FN1-222	ENST00000485567	E4F1	Q66K89	784 aa	Predicted RBP	5.7	□□□□□ -1.5
FN1-222	ENST00000485567	IQCE	Q6IPM2	695 aa		5.7	□□□□□ -1.5
FN1-222	ENST00000485567	CNNM4	Q6P4Q7	775 aa		5.7	□□□□□ -1.5
FN1-222	ENST00000485567	CRTC3	Q6UUV7	619 aa		5.7	□□□□□ -1.5
FN1-222	ENST00000485567	USP53	Q70EK8	1073 aa		5.7	□□□□□ -1.5
FN1-222	ENST00000485567	DDX46	Q7L014	1031 aa	Known RBP	5.7	□□□□□ -1.5

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