RNA–Protein interactions for RNA: ENST00000485479.5

APTX-227, Transcript of aprataxin, humanhuman

TSL 1 (best)

Gene APTX, Length 1,986 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APTX-227ENST00000485479 ZBED4O75132 1171 aa13.83□□□□□ -0.19
APTX-227ENST00000485479 DDAH1O94760 285 aa13.83□□□□□ -0.19
APTX-227ENST00000485479 STAT3P40763 770 aa13.83□□□□□ -0.19
APTX-227ENST00000485479 KIF22Q14807 665 aa13.83□□□□□ -0.19
APTX-227ENST00000485479 CDC37Q16543 378 aaPredicted RBP13.83□□□□□ -0.19
APTX-227ENST00000485479 BTNL9Q6UXG8 535 aa13.83□□□□□ -0.19
APTX-227ENST00000485479 GPR142Q7Z601 462 aa13.83□□□□□ -0.19
APTX-227ENST00000485479 SRBD1Q8N5C6 995 aaKnown RBP13.83□□□□□ -0.19
APTX-227ENST00000485479 JMJD4Q9H9V9 463 aa13.83□□□□□ -0.19
APTX-227ENST00000485479 UPF2Q9HAU5 1272 aaKnown RBP13.83□□□□□ -0.19
APTX-227ENST00000485479 CWC22Q9HCG8 908 aaKnown RBP13.83□□□□□ -0.19
APTX-227ENST00000485479 HPS5Q9UPZ3 1129 aa13.83□□□□□ -0.19
APTX-227ENST00000485479 MYPNQ86TC9 1320 aa13.83□□□□□ -0.19
APTX-227ENST00000485479 LARGE1O95461 756 aa13.83□□□□□ -0.2
APTX-227ENST00000485479 MYCP01106 439 aaPredicted RBP13.83□□□□□ -0.2
APTX-227ENST00000485479 ALAS1P13196 640 aa13.83□□□□□ -0.2
APTX-227ENST00000485479 FCGRTP55899 365 aa13.83□□□□□ -0.2
APTX-227ENST00000485479 FANCBQ8NB91 859 aa13.83□□□□□ -0.2
APTX-227ENST00000485479 PIGSQ96S52 555 aa13.83□□□□□ -0.2
APTX-227ENST00000485479 MTA3Q9BTC8 594 aa13.83□□□□□ -0.2
APTX-227ENST00000485479 RANBP17Q9H2T7 1088 aaKnown RBP13.83□□□□□ -0.2
APTX-227ENST00000485479 PPP1R11O60927 126 aaPredicted RBP13.82□□□□□ -0.2
APTX-227ENST00000485479 ADD1P35611 737 aaKnown RBP13.82□□□□□ -0.2
APTX-227ENST00000485479 RBM25P49756 843 aaKnown RBP13.82□□□□□ -0.2
APTX-227ENST00000485479 QRICH1Q2TAL8 776 aa13.82□□□□□ -0.2
APTX-227ENST00000485479 NOM1Q5C9Z4 860 aaKnown RBP13.82□□□□□ -0.2
APTX-227ENST00000485479 MUM1L1Q5H9M0 696 aa13.82□□□□□ -0.2
APTX-227ENST00000485479 SYNE3Q6ZMZ3 975 aa13.82□□□□□ -0.2
APTX-227ENST00000485479 TMTC2Q8N394 836 aa13.82□□□□□ -0.2
APTX-227ENST00000485479 MB21D1Q8N884 522 aa13.82□□□□□ -0.2
APTX-227ENST00000485479 TBC1D32Q96NH3 1257 aa13.82□□□□□ -0.2
APTX-227ENST00000485479 TEX13BQ9BXU2 312 aa13.82□□□□□ -0.2
APTX-227ENST00000485479 AGXT2Q9BYV1 514 aa13.82□□□□□ -0.2
APTX-227ENST00000485479 PRDM10Q9NQV6 1147 aa13.82□□□□□ -0.2
APTX-227ENST00000485479 FAM217BQ9NTX9 383 aaPredicted RBP13.82□□□□□ -0.2
APTX-227ENST00000485479 CCPG1Q9ULG6 757 aa13.82□□□□□ -0.2
APTX-227ENST00000485479 TPCN1Q9ULQ1 816 aa13.82□□□□□ -0.2
APTX-227ENST00000485479 PGK2P07205 417 aa13.82□□□□□ -0.2
APTX-227ENST00000485479 FLT3LGP49771 235 aa13.82□□□□□ -0.2
APTX-227ENST00000485479 METAP2P50579 478 aaKnown RBP eCLIP13.82□□□□□ -0.2
APTX-227ENST00000485479 RTN1Q16799 776 aa13.82□□□□□ -0.2
APTX-227ENST00000485479 GTF3C2Q8WUA4 911 aaPredicted RBP13.82□□□□□ -0.2
APTX-227ENST00000485479 PTCH2Q9Y6C5 1203 aa13.82□□□□□ -0.2
APTX-227ENST00000485479 DDX49Q9Y6V7 483 aaKnown RBP13.82□□□□□ -0.2
APTX-227ENST00000485479 PLA2G6O60733 806 aa13.81□□□□□ -0.2
APTX-227ENST00000485479 CD2BP2O95400 341 aaKnown RBP13.81□□□□□ -0.2
APTX-227ENST00000485479 CYP2B6P20813 491 aa13.81□□□□□ -0.2
APTX-227ENST00000485479 PDIA3P30101 505 aaKnown RBP13.81□□□□□ -0.2
APTX-227ENST00000485479 CCNA1P78396 465 aa13.81□□□□□ -0.2
APTX-227ENST00000485479 RIOX2Q8IUF8 465 aa13.81□□□□□ -0.2
APTX-227ENST00000485479 PURBQ96QR8 312 aaKnown RBP13.81□□□□□ -0.2
APTX-227ENST00000485479 NFIBO00712 420 aa13.8□□□□□ -0.2
APTX-227ENST00000485479 ELNP15502 786 aa13.8□□□□□ -0.2
APTX-227ENST00000485479 PLEKHH3Q7Z736 793 aa13.8□□□□□ -0.2
APTX-227ENST00000485479 CTU1Q7Z7A3 348 aaKnown RBP13.8□□□□□ -0.2
APTX-227ENST00000485479 NECAB1Q8N987 351 aa13.8□□□□□ -0.2
APTX-227ENST00000485479 PHKBQ93100 1093 aa13.8□□□□□ -0.2
APTX-227ENST00000485479 RNF146Q9NTX7 359 aa13.8□□□□□ -0.2
APTX-227ENST00000485479 EIF5BO60841 1220 aaKnown RBP13.8□□□□□ -0.2
APTX-227ENST00000485479 ICAM1P05362 532 aa13.8□□□□□ -0.2
APTX-227ENST00000485479 MAPK4P31152 587 aa13.8□□□□□ -0.2
APTX-227ENST00000485479 KIF5BP33176 963 aa13.8□□□□□ -0.2
APTX-227ENST00000485479 CCL14Q16627 93 aa13.8□□□□□ -0.2
APTX-227ENST00000485479 TMTC3Q6ZXV5 915 aa13.8□□□□□ -0.2
APTX-227ENST00000485479 SH3TC2Q8TF17 1288 aa13.8□□□□□ -0.2
APTX-227ENST00000485479 COA7Q96BR5 231 aa13.8□□□□□ -0.2
APTX-227ENST00000485479 IL17RAQ96F46 866 aa13.8□□□□□ -0.2
APTX-227ENST00000485479 TRERF1Q96PN7 1200 aa13.8□□□□□ -0.2
APTX-227ENST00000485479 MCOLN1Q9GZU1 580 aa13.8□□□□□ -0.2
APTX-227ENST00000485479 SRRDQ9UH36 339 aa13.8□□□□□ -0.2
APTX-227ENST00000485479 IVNS1ABPQ9Y6Y0 642 aa13.8□□□□□ -0.2
APTX-227ENST00000485479 CNTNAP5Q8WYK1 1306 aa13.79□□□□□ -0.2
APTX-227ENST00000485479 CALM1P0DP23 149 aa13.79□□□□□ -0.2
APTX-227ENST00000485479 CALM2P0DP24 149 aa13.79□□□□□ -0.2
APTX-227ENST00000485479 CALM3P0DP25 149 aa13.79□□□□□ -0.2
APTX-227ENST00000485479 ADORA2AP29274 412 aa13.79□□□□□ -0.2
APTX-227ENST00000485479 NSMFQ6X4W1 530 aa13.79□□□□□ -0.2
APTX-227ENST00000485479 GPKOWQ92917 476 aaPredicted RBP eCLIP13.79□□□□□ -0.29e-6■■□□□ 14.5
APTX-227ENST00000485479 RIOX1Q9H6W3 641 aa13.79□□□□□ -0.2
APTX-227ENST00000485479 GJD2Q9UKL4 321 aa13.79□□□□□ -0.2
APTX-227ENST00000485479 ZNFX1Q9P2E3 1918 aaKnown RBP13.79□□□□□ -0.2
APTX-227ENST00000485479 COBLO75128 1261 aa13.78□□□□□ -0.2
APTX-227ENST00000485479 SCRN1Q12765 414 aa13.78□□□□□ -0.2
APTX-227ENST00000485479 TRIM32Q13049 653 aa13.78□□□□□ -0.2
APTX-227ENST00000485479 ME3Q16798 604 aa13.78□□□□□ -0.2
APTX-227ENST00000485479 RAET1EQ8TD07 263 aa13.78□□□□□ -0.2
APTX-227ENST00000485479 TBC1D5Q92609 795 aa13.78□□□□□ -0.2
APTX-227ENST00000485479 MMP19Q99542 508 aa13.78□□□□□ -0.2
APTX-227ENST00000485479 PTPN22Q9Y2R2 807 aa13.78□□□□□ -0.2
APTX-227ENST00000485479 ATP2A1O14983 1001 aa13.78□□□□□ -0.2
APTX-227ENST00000485479 ZBTB5O15062 677 aa13.78□□□□□ -0.2
APTX-227ENST00000485479 PTPREP23469 700 aa13.78□□□□□ -0.2
APTX-227ENST00000485479 MORN1Q5T089 497 aa13.78□□□□□ -0.2
APTX-227ENST00000485479 FBXL16Q8N461 479 aa13.78□□□□□ -0.2
APTX-227ENST00000485479 NPLOC4Q8TAT6 608 aa13.78□□□□□ -0.2
APTX-227ENST00000485479 FLRT1Q9NZU1 646 aa13.78□□□□□ -0.2
APTX-227ENST00000485479 SLC25A27O95847 323 aa13.77□□□□□ -0.21
APTX-227ENST00000485479 CNTN2Q02246 1040 aa13.77□□□□□ -0.21
APTX-227ENST00000485479 FUT2Q10981 343 aa13.77□□□□□ -0.21
APTX-227ENST00000485479 GRB14Q14449 540 aa13.77□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 75.9 ms