RNA–Protein interactions for RNA: ENST00000485055.5

CCDC39-205, Transcript of coiled-coil domain containing 39, humanhuman

TSL 1 (best)

Gene CCDC39, Length 2,874 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC39-205ENST00000485055 NOB1Q9ULX3 412 aaKnown RBP6.24□□□□□ -1.41
CCDC39-205ENST00000485055 WTIPA6NIX2 430 aaPredicted RBP6.23□□□□□ -1.41
CCDC39-205ENST00000485055 UBTFL1P0CB47 393 aaPredicted RBP6.23□□□□□ -1.41
CCDC39-205ENST00000485055 MZF1P28698 734 aaPredicted RBP6.23□□□□□ -1.41
CCDC39-205ENST00000485055 CNGA1P29973 690 aa6.23□□□□□ -1.41
CCDC39-205ENST00000485055 FOXK1P85037 733 aa6.23□□□□□ -1.41
CCDC39-205ENST00000485055 ATP8B2P98198 1209 aa6.23□□□□□ -1.41
CCDC39-205ENST00000485055 ALKBH2Q6NS38 261 aa6.23□□□□□ -1.41
CCDC39-205ENST00000485055 SLF2Q8IX21 1173 aa6.23□□□□□ -1.41
CCDC39-205ENST00000485055 DZIP1LQ8IYY4 767 aaKnown RBP6.23□□□□□ -1.41
CCDC39-205ENST00000485055 ZNF654Q8IZM8 581 aa6.23□□□□□ -1.41
CCDC39-205ENST00000485055 TNS4Q8IZW8 715 aa6.23□□□□□ -1.41
CCDC39-205ENST00000485055 SPICE1Q8N0Z3 855 aa6.23□□□□□ -1.41
CCDC39-205ENST00000485055 UBR7Q8N806 425 aa6.23□□□□□ -1.41
CCDC39-205ENST00000485055 HELQQ8TDG4 1101 aa6.23□□□□□ -1.41
CCDC39-205ENST00000485055 FAM151AQ8WW52 585 aa6.23□□□□□ -1.41
CCDC39-205ENST00000485055 DNAJC7Q99615 494 aa6.23□□□□□ -1.41
CCDC39-205ENST00000485055 PUS3Q9BZE2 481 aaKnown RBP6.23□□□□□ -1.41
CCDC39-205ENST00000485055 KIAA1024Q9UPX6 916 aa6.23□□□□□ -1.41
CCDC39-205ENST00000485055 PLXNB2O15031 1838 aa6.23□□□□□ -1.41
CCDC39-205ENST00000485055 MYO5AQ9Y4I1 1855 aaKnown RBP6.23□□□□□ -1.41
CCDC39-205ENST00000485055 CRKP46108 304 aa6.23□□□□□ -1.41
CCDC39-205ENST00000485055 KCNJ4P48050 445 aa6.23□□□□□ -1.41
CCDC39-205ENST00000485055 GJA8P48165 433 aa6.23□□□□□ -1.41
CCDC39-205ENST00000485055 IREB2P48200 963 aaKnown RBP6.23□□□□□ -1.41
CCDC39-205ENST00000485055 LRRC24Q50LG9 513 aa6.23□□□□□ -1.41
CCDC39-205ENST00000485055 VPS37DQ86XT2 251 aa6.23□□□□□ -1.41
CCDC39-205ENST00000485055 HNRNPLLQ8WVV9 542 aaKnown RBP6.23□□□□□ -1.41
CCDC39-205ENST00000485055 RELTQ969Z4 430 aa6.23□□□□□ -1.41
CCDC39-205ENST00000485055 EMID1Q96A84 441 aaPredicted RBP6.23□□□□□ -1.41
CCDC39-205ENST00000485055 PRMT6Q96LA8 375 aaPredicted RBP6.23□□□□□ -1.41
CCDC39-205ENST00000485055 DEFB129Q9H1M3 183 aa6.23□□□□□ -1.41
CCDC39-205ENST00000485055 CD248Q9HCU0 757 aa6.23□□□□□ -1.41
CCDC39-205ENST00000485055 KMT5AQ9NQR1 393 aa6.23□□□□□ -1.41
CCDC39-205ENST00000485055 SMC4Q9NTJ3 1288 aa6.23□□□□□ -1.41
CCDC39-205ENST00000485055 NAV1Q8NEY1 1877 aa6.22□□□□□ -1.41
CCDC39-205ENST00000485055 MYH1P12882 1939 aa6.22□□□□□ -1.41
CCDC39-205ENST00000485055 ZBTB7BO15156 539 aaPredicted RBP6.22□□□□□ -1.41
CCDC39-205ENST00000485055 NBNO60934 754 aa6.22□□□□□ -1.41
CCDC39-205ENST00000485055 NAT2P11245 290 aa6.22□□□□□ -1.41
CCDC39-205ENST00000485055 TRIM27P14373 513 aa6.22□□□□□ -1.41
CCDC39-205ENST00000485055 EHHADHQ08426 723 aa6.22□□□□□ -1.41
CCDC39-205ENST00000485055 PPIL2Q13356 520 aa6.22□□□□□ -1.41
CCDC39-205ENST00000485055 SQSTM1Q13501 440 aa6.22□□□□□ -1.41
CCDC39-205ENST00000485055 NAA30Q147X3 362 aaPredicted RBP6.22□□□□□ -1.41
CCDC39-205ENST00000485055 LARP1BQ659C4 914 aaKnown RBP6.22□□□□□ -1.41
CCDC39-205ENST00000485055 ANKS3Q6ZW76 656 aa6.22□□□□□ -1.41
CCDC39-205ENST00000485055 DDX42Q86XP3 938 aaKnown RBP eCLIP6.22□□□□□ -1.41
CCDC39-205ENST00000485055 JARID2Q92833 1246 aaPredicted RBP6.22□□□□□ -1.41
CCDC39-205ENST00000485055 TEKT1Q969V4 418 aa6.22□□□□□ -1.41
CCDC39-205ENST00000485055 CDCA7LQ96GN5 454 aa6.22□□□□□ -1.41
CCDC39-205ENST00000485055 ASTN2O75129 1339 aaPredicted RBP6.22□□□□□ -1.41
CCDC39-205ENST00000485055 GPR75-ASB3A0A0A6YYF3 556 aa6.22□□□□□ -1.41
CCDC39-205ENST00000485055 A6NCN8 305 aa6.22□□□□□ -1.41
CCDC39-205ENST00000485055 SMAPO00193 183 aa6.22□□□□□ -1.41
CCDC39-205ENST00000485055 UQCRFS1P1P0C7P4 283 aa6.22□□□□□ -1.41
CCDC39-205ENST00000485055 DSG3P32926 999 aa6.22□□□□□ -1.41
CCDC39-205ENST00000485055 CTHP32929 405 aa6.22□□□□□ -1.41
CCDC39-205ENST00000485055 LBX1P52954 281 aa6.22□□□□□ -1.41
CCDC39-205ENST00000485055 NR1H3Q13133 447 aa6.22□□□□□ -1.41
CCDC39-205ENST00000485055 MVPQ14764 893 aaKnown RBP6.22□□□□□ -1.41
CCDC39-205ENST00000485055 CTU1Q7Z7A3 348 aaKnown RBP6.22□□□□□ -1.41
CCDC39-205ENST00000485055 ANKRD23Q86SG2 305 aa6.22□□□□□ -1.41
CCDC39-205ENST00000485055 ANKRD42Q8N9B4 389 aa6.22□□□□□ -1.41
CCDC39-205ENST00000485055 JPH3Q8WXH2 748 aaPredicted RBP6.22□□□□□ -1.41
CCDC39-205ENST00000485055 HLA-CQ95604 372 aa6.22□□□□□ -1.41
CCDC39-205ENST00000485055 NELL2Q99435 816 aa6.22□□□□□ -1.41
CCDC39-205ENST00000485055 AOC2O75106 756 aa6.21□□□□□ -1.41
CCDC39-205ENST00000485055 TAF5LO75529 589 aa6.21□□□□□ -1.41
CCDC39-205ENST00000485055 MTA2O94776 668 aa6.21□□□□□ -1.41
CCDC39-205ENST00000485055 GNAI2P04899 355 aa6.21□□□□□ -1.41
CCDC39-205ENST00000485055 ADD2P35612 726 aa6.21□□□□□ -1.41
CCDC39-205ENST00000485055 ZNF157P51786 506 aaPredicted RBP6.21□□□□□ -1.41
CCDC39-205ENST00000485055 GUCA2AQ02747 115 aa6.21□□□□□ -1.41
CCDC39-205ENST00000485055 PPATQ06203 517 aa6.21□□□□□ -1.41
CCDC39-205ENST00000485055 MTA1Q13330 715 aa6.21□□□□□ -1.41
CCDC39-205ENST00000485055 METTL24Q5JXM2 366 aa6.21□□□□□ -1.41
CCDC39-205ENST00000485055 MFSD14BQ5SR56 506 aa6.21□□□□□ -1.41
CCDC39-205ENST00000485055 C16orf54Q6UWD8 224 aa6.21□□□□□ -1.41
CCDC39-205ENST00000485055 KRT77Q7Z794 578 aa6.21□□□□□ -1.41
CCDC39-205ENST00000485055 CEP120Q8N960 986 aa6.21□□□□□ -1.41
CCDC39-205ENST00000485055 TIFAQ96CG3 184 aa6.21□□□□□ -1.41
CCDC39-205ENST00000485055 YTHDC1Q96MU7 727 aaKnown RBP6.21□□□□□ -1.41
CCDC39-205ENST00000485055 ZNF830Q96NB3 372 aaPredicted RBP6.21□□□□□ -1.41
CCDC39-205ENST00000485055 PPP1R12BO60237 982 aaPredicted RBP6.21□□□□□ -1.42
CCDC39-205ENST00000485055 KATNA1O75449 491 aa6.21□□□□□ -1.42
CCDC39-205ENST00000485055 MOGSQ13724 837 aa6.21□□□□□ -1.42
CCDC39-205ENST00000485055 DSC3Q14574 896 aa6.21□□□□□ -1.42
CCDC39-205ENST00000485055 CDC37Q16543 378 aaPredicted RBP6.21□□□□□ -1.42
CCDC39-205ENST00000485055 CCDC70Q6NSX1 233 aa6.21□□□□□ -1.42
CCDC39-205ENST00000485055 ABHD8Q96I13 439 aa6.21□□□□□ -1.42
CCDC39-205ENST00000485055 AGBL1Q96MI9 1066 aa6.21□□□□□ -1.42
CCDC39-205ENST00000485055 SMAD5Q99717 465 aaKnown RBP6.21□□□□□ -1.42
CCDC39-205ENST00000485055 CXCL11O14625 94 aa6.2□□□□□ -1.42
CCDC39-205ENST00000485055 FIBPO43427 364 aa6.2□□□□□ -1.42
CCDC39-205ENST00000485055 GTF2A2P52657 109 aa6.2□□□□□ -1.42
CCDC39-205ENST00000485055 EPHB1P54762 984 aa6.2□□□□□ -1.42
CCDC39-205ENST00000485055 SEPT2Q15019 361 aa6.2□□□□□ -1.42
CCDC39-205ENST00000485055 ATP2B3Q16720 1220 aa6.2□□□□□ -1.42
CCDC39-205ENST00000485055 DCAF15Q66K64 600 aa6.2□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms