RNA–Protein interactions for RNA: ENST00000484763.1

VCPKMT-203, Transcript of valosin containing protein lysine methyltransferase, humanhuman

TSL 1 (best)

Gene VCPKMT, Length 1,849 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCPKMT-203ENST00000484763 DNM1Q05193 864 aaKnown RBP23.51■■□□□ 1.35
VCPKMT-203ENST00000484763 CST9Q5W186 159 aa23.51■■□□□ 1.35
VCPKMT-203ENST00000484763 NOSTRINQ8IVI9 506 aa23.51■■□□□ 1.35
VCPKMT-203ENST00000484763 DAGLBQ8NCG7 672 aa23.51■■□□□ 1.35
VCPKMT-203ENST00000484763 PROCA1Q8NCQ7 364 aaPredicted RBP23.51■■□□□ 1.35
VCPKMT-203ENST00000484763 OXER1Q8TDS5 423 aa23.51■■□□□ 1.35
VCPKMT-203ENST00000484763 CHAMP1Q96JM3 812 aa23.51■■□□□ 1.35
VCPKMT-203ENST00000484763 PPP1R9AQ9ULJ8 1098 aa23.51■■□□□ 1.35
VCPKMT-203ENST00000484763 SNAP25P60880 206 aa23.5■■□□□ 1.35
VCPKMT-203ENST00000484763 SAMD1Q6SPF0 538 aaPredicted RBP23.5■■□□□ 1.35
VCPKMT-203ENST00000484763 FBXO11Q86XK2 927 aa23.5■■□□□ 1.35
VCPKMT-203ENST00000484763 C6orf50Q9HD87 102 aa23.5■■□□□ 1.35
VCPKMT-203ENST00000484763 RLFQ13129 1914 aa23.5■■□□□ 1.35
VCPKMT-203ENST00000484763 GNA11P29992 359 aa23.49■■□□□ 1.35
VCPKMT-203ENST00000484763 TRAF1Q13077 416 aa23.49■■□□□ 1.35
VCPKMT-203ENST00000484763 NR5A1Q13285 461 aa23.49■■□□□ 1.35
VCPKMT-203ENST00000484763 BLIDQ8IZY5 108 aa23.49■■□□□ 1.35
VCPKMT-203ENST00000484763 PCDHA1Q9Y5I3 950 aa23.49■■□□□ 1.35
VCPKMT-203ENST00000484763 PASKQ96RG2 1323 aa23.49■■□□□ 1.35
VCPKMT-203ENST00000484763 SMCO2A6NFE2 343 aa23.49■■□□□ 1.35
VCPKMT-203ENST00000484763 USP17L15C9J2P7 530 aa23.49■■□□□ 1.35
VCPKMT-203ENST00000484763 USP17L13C9JLJ4 530 aa23.49■■□□□ 1.35
VCPKMT-203ENST00000484763 USP17L11C9JVI0 530 aa23.49■■□□□ 1.35
VCPKMT-203ENST00000484763 USP17L18D6R9N7 530 aa23.49■■□□□ 1.35
VCPKMT-203ENST00000484763 USP17L22D6RA61 530 aa23.49■■□□□ 1.35
VCPKMT-203ENST00000484763 USP17L17D6RBQ6 530 aa23.49■■□□□ 1.35
VCPKMT-203ENST00000484763 USP17L19D6RCP7 530 aa23.49■■□□□ 1.35
VCPKMT-203ENST00000484763 USP17L20D6RJB6 530 aa23.49■■□□□ 1.35
VCPKMT-203ENST00000484763 GOLGA6L22H0YM25 854 aa23.49■■□□□ 1.35
VCPKMT-203ENST00000484763 KRT85P78386 507 aa23.49■■□□□ 1.35
VCPKMT-203ENST00000484763 USP17L24Q0WX57 530 aa23.49■■□□□ 1.35
VCPKMT-203ENST00000484763 NFKBIBQ15653 356 aa23.49■■□□□ 1.35
VCPKMT-203ENST00000484763 MYSM1Q5VVJ2 828 aa23.49■■□□□ 1.35
VCPKMT-203ENST00000484763 SMC1BQ8NDV3 1235 aa23.49■■□□□ 1.35
VCPKMT-203ENST00000484763 NCLP19338 710 aaKnown RBP23.48■■□□□ 1.35
VCPKMT-203ENST00000484763 MCM4P33991 863 aa23.48■■□□□ 1.35
VCPKMT-203ENST00000484763 CATSPERGQ6ZRH7 1159 aa23.48■■□□□ 1.35
VCPKMT-203ENST00000484763 FDX1P10109 184 aa23.47■■□□□ 1.35
VCPKMT-203ENST00000484763 GJA5P36382 358 aa23.47■■□□□ 1.35
VCPKMT-203ENST00000484763 ADCY7P51828 1080 aa23.47■■□□□ 1.35
VCPKMT-203ENST00000484763 ATL3Q6DD88 541 aa23.47■■□□□ 1.35
VCPKMT-203ENST00000484763 CCDC174Q6PII3 467 aa23.47■■□□□ 1.35
VCPKMT-203ENST00000484763 GADL1Q6ZQY3 521 aa23.47■■□□□ 1.35
VCPKMT-203ENST00000484763 BICD2Q8TD16 824 aa23.47■■□□□ 1.35
VCPKMT-203ENST00000484763 TNFRSF25Q93038 417 aa23.47■■□□□ 1.35
VCPKMT-203ENST00000484763 WNK4Q96J92 1243 aa23.47■■□□□ 1.35
VCPKMT-203ENST00000484763 ZNF396Q96N95 335 aaPredicted RBP23.47■■□□□ 1.35
VCPKMT-203ENST00000484763 CNPY2Q9Y2B0 182 aa23.47■■□□□ 1.35
VCPKMT-203ENST00000484763 SNAPC2Q13487 334 aa23.47■■□□□ 1.35
VCPKMT-203ENST00000484763 USH1GQ495M9 461 aa23.47■■□□□ 1.35
VCPKMT-203ENST00000484763 TREML2Q5T2D2 321 aa23.47■■□□□ 1.35
VCPKMT-203ENST00000484763 SLC38A10Q9HBR0 1119 aa23.47■■□□□ 1.35
VCPKMT-203ENST00000484763 MYPNQ86TC9 1320 aa23.46■■□□□ 1.35
VCPKMT-203ENST00000484763 DDX11L8A8MPP1 907 aa23.46■■□□□ 1.35
VCPKMT-203ENST00000484763 COG2Q14746 738 aa23.46■■□□□ 1.35
VCPKMT-203ENST00000484763 M0R2N6 131 aa23.45■■□□□ 1.34
VCPKMT-203ENST00000484763 HUNKP57058 714 aa23.45■■□□□ 1.34
VCPKMT-203ENST00000484763 FASTKD5Q7L8L6 764 aaKnown RBP23.45■■□□□ 1.34
VCPKMT-203ENST00000484763 CUL5Q93034 780 aa23.45■■□□□ 1.34
VCPKMT-203ENST00000484763 GLT8D2Q9H1C3 349 aa23.45■■□□□ 1.34
VCPKMT-203ENST00000484763 RIC8AQ9NPQ8 531 aa23.45■■□□□ 1.34
VCPKMT-203ENST00000484763 CFAP45Q9UL16 551 aa23.45■■□□□ 1.34
VCPKMT-203ENST00000484763 COL11A1P12107 1806 aaPredicted RBP23.45■■□□□ 1.34
VCPKMT-203ENST00000484763 ZBED4O75132 1171 aa23.45■■□□□ 1.34
VCPKMT-203ENST00000484763 ICAM1P05362 532 aa23.45■■□□□ 1.34
VCPKMT-203ENST00000484763 DSG3P32926 999 aa23.45■■□□□ 1.34
VCPKMT-203ENST00000484763 ATG4CQ96DT6 458 aa23.45■■□□□ 1.34
VCPKMT-203ENST00000484763 AGTPBP1Q9UPW5 1226 aa23.45■■□□□ 1.34
VCPKMT-203ENST00000484763 CTDP1Q9Y5B0 961 aaPredicted RBP23.45■■□□□ 1.34
VCPKMT-203ENST00000484763 VWA5AO00534 786 aa23.44■■□□□ 1.34
VCPKMT-203ENST00000484763 ADAMTS3O15072 1205 aa23.44■■□□□ 1.34
VCPKMT-203ENST00000484763 FIBPO43427 364 aa23.44■■□□□ 1.34
VCPKMT-203ENST00000484763 HOXA7P31268 230 aaPredicted RBP23.44■■□□□ 1.34
VCPKMT-203ENST00000484763 REXO1Q8N1G1 1221 aaKnown RBP23.44■■□□□ 1.34
VCPKMT-203ENST00000484763 SCAND2PQ9GZW5 306 aaPredicted RBP23.44■■□□□ 1.34
VCPKMT-203ENST00000484763 PNMA2Q9UL42 364 aa23.44■■□□□ 1.34
VCPKMT-203ENST00000484763 PCDHA6Q9UN73 950 aa23.44■■□□□ 1.34
VCPKMT-203ENST00000484763 PCDHA8Q9Y5H6 950 aa23.44■■□□□ 1.34
VCPKMT-203ENST00000484763 ZNF536O15090 1300 aa23.44■■□□□ 1.34
VCPKMT-203ENST00000484763 ZBTB48P10074 688 aaPredicted RBP23.43■■□□□ 1.34
VCPKMT-203ENST00000484763 MRPL12P52815 198 aaKnown RBP23.43■■□□□ 1.34
VCPKMT-203ENST00000484763 MOGSQ13724 837 aa23.43■■□□□ 1.34
VCPKMT-203ENST00000484763 CSPP1Q1MSJ5 1256 aa23.43■■□□□ 1.34
VCPKMT-203ENST00000484763 RILPL1Q5EBL4 403 aa23.43■■□□□ 1.34
VCPKMT-203ENST00000484763 PSTPIP2Q9H939 334 aa23.43■■□□□ 1.34
VCPKMT-203ENST00000484763 HOXC10Q9NYD6 342 aa23.43■■□□□ 1.34
VCPKMT-203ENST00000484763 TFIP11Q9UBB9 837 aaKnown RBP23.43■■□□□ 1.34
VCPKMT-203ENST00000484763 ADAMTS5Q9UNA0 930 aa23.43■■□□□ 1.34
VCPKMT-203ENST00000484763 ABCB11O95342 1321 aa23.43■■□□□ 1.34
VCPKMT-203ENST00000484763 A0A0G2JMZ2 1700 aa23.43■■□□□ 1.34
VCPKMT-203ENST00000484763 TOMM70O94826 608 aa23.43■■□□□ 1.34
VCPKMT-203ENST00000484763 EARS2Q5JPH6 523 aaKnown RBP23.43■■□□□ 1.34
VCPKMT-203ENST00000484763 PIK3AP1Q6ZUJ8 805 aa23.43■■□□□ 1.34
VCPKMT-203ENST00000484763 RASGRP4Q8TDF6 673 aa23.43■■□□□ 1.34
VCPKMT-203ENST00000484763 USP28Q96RU2 1077 aa23.43■■□□□ 1.34
VCPKMT-203ENST00000484763 GDPD2Q9HCC8 539 aa23.43■■□□□ 1.34
VCPKMT-203ENST00000484763 CCPG1Q9ULG6 757 aa23.43■■□□□ 1.34
VCPKMT-203ENST00000484763 SMCHD1A6NHR9 2005 aa23.42■■□□□ 1.34
VCPKMT-203ENST00000484763 CCDC194A0A1B0GVG4 234 aa23.42■■□□□ 1.34
VCPKMT-203ENST00000484763 SPDYE16A6NNV3 312 aaPredicted RBP23.42■■□□□ 1.34
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms