RNA–Protein interactions for RNA: ENST00000484566.5

DDX39B-221, Transcript of DExD-box helicase 39B, humanhuman

TSL 5

Gene DDX39B, Length 857 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39B-221ENST00000484566 CABP5Q9NP86 173 aa10.39□□□□□ -0.75
DDX39B-221ENST00000484566 CXXC1Q9P0U4 656 aaPredicted RBP10.39□□□□□ -0.75
DDX39B-221ENST00000484566 CHD9Q3L8U1 2897 aa10.38□□□□□ -0.75
DDX39B-221ENST00000484566 PI4K2BG5E9Z4 385 aa10.38□□□□□ -0.75
DDX39B-221ENST00000484566 PQBP1O60828 265 aaKnown RBP10.38□□□□□ -0.75
DDX39B-221ENST00000484566 IGSF3O75054 1194 aa10.38□□□□□ -0.75
DDX39B-221ENST00000484566 RGS20O76081 388 aa10.38□□□□□ -0.75
DDX39B-221ENST00000484566 GNAI3P08754 354 aa10.38□□□□□ -0.75
DDX39B-221ENST00000484566 RARBP10826 455 aa10.38□□□□□ -0.75
DDX39B-221ENST00000484566 GGCXP38435 758 aa10.38□□□□□ -0.75
DDX39B-221ENST00000484566 G3BP1Q13283 466 aaKnown RBP eCLIP10.38□□□□□ -0.75
DDX39B-221ENST00000484566 CCDC85BQ15834 202 aaPredicted RBP10.38□□□□□ -0.75
DDX39B-221ENST00000484566 ABCB5Q2M3G0 1257 aa10.38□□□□□ -0.75
DDX39B-221ENST00000484566 CERKLQ49MI3 558 aaPredicted RBP10.38□□□□□ -0.75
DDX39B-221ENST00000484566 RNF180Q86T96 592 aa10.38□□□□□ -0.75
DDX39B-221ENST00000484566 CERS3Q8IU89 383 aa10.38□□□□□ -0.75
DDX39B-221ENST00000484566 SHCBP1Q8NEM2 672 aa10.38□□□□□ -0.75
DDX39B-221ENST00000484566 MOV10L1Q9BXT6 1211 aaKnown RBP10.38□□□□□ -0.75
DDX39B-221ENST00000484566 SPATC1LQ9H0A9 340 aa10.38□□□□□ -0.75
DDX39B-221ENST00000484566 XPNPEP3Q9NQH7 507 aa10.38□□□□□ -0.75
DDX39B-221ENST00000484566 SERPINB13Q9UIV8 391 aa10.38□□□□□ -0.75
DDX39B-221ENST00000484566 PHF24Q9UPV7 400 aa10.38□□□□□ -0.75
DDX39B-221ENST00000484566 ZNF318Q5VUA4 2279 aa10.38□□□□□ -0.75
DDX39B-221ENST00000484566 A0A0G2JMZ2 1700 aa10.38□□□□□ -0.75
DDX39B-221ENST00000484566 MYO5AQ9Y4I1 1855 aaKnown RBP10.38□□□□□ -0.75
DDX39B-221ENST00000484566 SMCHD1A6NHR9 2005 aa10.38□□□□□ -0.75
DDX39B-221ENST00000484566 EPG5Q9HCE0 2579 aa10.37□□□□□ -0.75
DDX39B-221ENST00000484566 KIAA0355O15063 1070 aa10.37□□□□□ -0.75
DDX39B-221ENST00000484566 IGHA2P01877 340 aa10.37□□□□□ -0.75
DDX39B-221ENST00000484566 ERCC3P19447 782 aa10.37□□□□□ -0.75
DDX39B-221ENST00000484566 USP5P45974 858 aa10.37□□□□□ -0.75
DDX39B-221ENST00000484566 EPHB4P54760 987 aa10.37□□□□□ -0.75
DDX39B-221ENST00000484566 MTX1Q13505 466 aa10.37□□□□□ -0.75
DDX39B-221ENST00000484566 CCDC158Q5M9N0 1113 aa10.37□□□□□ -0.75
DDX39B-221ENST00000484566 TATDN1Q6P1N9 297 aa10.37□□□□□ -0.75
DDX39B-221ENST00000484566 CCDC174Q6PII3 467 aa10.37□□□□□ -0.75
DDX39B-221ENST00000484566 ADGRA1Q86SQ6 560 aa10.37□□□□□ -0.75
DDX39B-221ENST00000484566 TTC6Q86TZ1 520 aa10.37□□□□□ -0.75
DDX39B-221ENST00000484566 ACER1Q8TDN7 264 aa10.37□□□□□ -0.75
DDX39B-221ENST00000484566 TANGO6Q9C0B7 1094 aa10.37□□□□□ -0.75
DDX39B-221ENST00000484566 EHD4Q9H223 541 aa10.37□□□□□ -0.75
DDX39B-221ENST00000484566 SNRKQ9NRH2 765 aa10.37□□□□□ -0.75
DDX39B-221ENST00000484566 TMEM39AQ9NV64 488 aa10.37□□□□□ -0.75
DDX39B-221ENST00000484566 PTPRZ1P23471 2315 aaPredicted RBP10.36□□□□□ -0.75
DDX39B-221ENST00000484566 ZFHX4Q86UP3 3567 aa10.36□□□□□ -0.75
DDX39B-221ENST00000484566 ITGB8P26012 769 aa10.36□□□□□ -0.75
DDX39B-221ENST00000484566 KCNQ1P51787 676 aa10.36□□□□□ -0.75
DDX39B-221ENST00000484566 PLS1Q14651 629 aa10.36□□□□□ -0.75
DDX39B-221ENST00000484566 COG2Q14746 738 aa10.36□□□□□ -0.75
DDX39B-221ENST00000484566 CCDC129Q6ZRS4 1044 aa10.36□□□□□ -0.75
DDX39B-221ENST00000484566 NCAPG2Q86XI2 1143 aa10.36□□□□□ -0.75
DDX39B-221ENST00000484566 ABRAQ8N0Z2 381 aa10.36□□□□□ -0.75
DDX39B-221ENST00000484566 MB21D1Q8N884 522 aa10.36□□□□□ -0.75
DDX39B-221ENST00000484566 MROH8Q9H579 483 aa10.36□□□□□ -0.75
DDX39B-221ENST00000484566 HOXC10Q9NYD6 342 aa10.36□□□□□ -0.75
DDX39B-221ENST00000484566 NRBP1Q9UHY1 535 aa10.36□□□□□ -0.75
DDX39B-221ENST00000484566 NOB1Q9ULX3 412 aaKnown RBP10.36□□□□□ -0.75
DDX39B-221ENST00000484566 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP10.36□□□□□ -0.75
DDX39B-221ENST00000484566 ROBO3Q96MS0 1386 aa10.36□□□□□ -0.75
DDX39B-221ENST00000484566 PLXNA1Q9UIW2 1896 aa10.36□□□□□ -0.75
DDX39B-221ENST00000484566 ZNFX1Q9P2E3 1918 aaKnown RBP10.35□□□□□ -0.75
DDX39B-221ENST00000484566 A0A1W2PQ45 241 aaPredicted RBP10.35□□□□□ -0.75
DDX39B-221ENST00000484566 A0A1W2PQY0 241 aa10.35□□□□□ -0.75
DDX39B-221ENST00000484566 DCDC2CA8MYV0 355 aa10.35□□□□□ -0.75
DDX39B-221ENST00000484566 COBLO75128 1261 aa10.35□□□□□ -0.75
DDX39B-221ENST00000484566 CYP7A1P22680 504 aa10.35□□□□□ -0.75
DDX39B-221ENST00000484566 DYNLL1P63167 89 aaKnown RBP10.35□□□□□ -0.75
DDX39B-221ENST00000484566 TFF2Q03403 129 aa10.35□□□□□ -0.75
DDX39B-221ENST00000484566 AAK1Q2M2I8 961 aa10.35□□□□□ -0.75
DDX39B-221ENST00000484566 PRAMEF19Q5SWL8 479 aa10.35□□□□□ -0.75
DDX39B-221ENST00000484566 ERMP1Q7Z2K6 904 aa10.35□□□□□ -0.75
DDX39B-221ENST00000484566 SLC44A5Q8NCS7 719 aa10.35□□□□□ -0.75
DDX39B-221ENST00000484566 MAML3Q96JK9 1138 aa10.35□□□□□ -0.75
DDX39B-221ENST00000484566 STARD7Q9NQZ5 370 aa10.35□□□□□ -0.75
DDX39B-221ENST00000484566 NAV1Q8NEY1 1877 aa10.35□□□□□ -0.75
DDX39B-221ENST00000484566 CHD7Q9P2D1 2997 aa10.35□□□□□ -0.75
DDX39B-221ENST00000484566 MPHOSPH10O00566 681 aaKnown RBP10.34□□□□□ -0.75
DDX39B-221ENST00000484566 PGK1P00558 417 aa10.34□□□□□ -0.75
DDX39B-221ENST00000484566 CYP2E1P05181 493 aaPredicted RBP10.34□□□□□ -0.75
DDX39B-221ENST00000484566 MS4A1P11836 297 aa10.34□□□□□ -0.75
DDX39B-221ENST00000484566 FCER1AP12319 257 aa10.34□□□□□ -0.75
DDX39B-221ENST00000484566 AKR1A1P14550 325 aa10.34□□□□□ -0.75
DDX39B-221ENST00000484566 PPIGQ13427 754 aaKnown RBP eCLIP10.34□□□□□ -0.751e-12■■□□□ 11.4
DDX39B-221ENST00000484566 OS9Q13438 667 aaPredicted RBP10.34□□□□□ -0.75
DDX39B-221ENST00000484566 MIGA1Q8NAN2 632 aa10.34□□□□□ -0.75
DDX39B-221ENST00000484566 NUP133Q8WUM0 1156 aa10.34□□□□□ -0.75
DDX39B-221ENST00000484566 SPIRE2Q8WWL2 714 aa10.34□□□□□ -0.75
DDX39B-221ENST00000484566 TOX2Q96NM4 488 aa10.34□□□□□ -0.75
DDX39B-221ENST00000484566 PBX4Q9BYU1 374 aa10.34□□□□□ -0.75
DDX39B-221ENST00000484566 PRDM12Q9H4Q4 367 aa10.34□□□□□ -0.75
DDX39B-221ENST00000484566 SLC27A5Q9Y2P5 690 aa10.34□□□□□ -0.75
DDX39B-221ENST00000484566 MYH8P13535 1937 aa10.34□□□□□ -0.75
DDX39B-221ENST00000484566 MROH7Q68CQ1 1323 aa10.33□□□□□ -0.76
DDX39B-221ENST00000484566 CFAP47Q6ZTR5 3102 aa10.33□□□□□ -0.76
DDX39B-221ENST00000484566 APBB1O00213 710 aa10.33□□□□□ -0.76
DDX39B-221ENST00000484566 HOXA2O43364 376 aa10.33□□□□□ -0.76
DDX39B-221ENST00000484566 IDH1O75874 414 aaKnown RBP10.33□□□□□ -0.76
DDX39B-221ENST00000484566 FLOT1O75955 427 aa10.33□□□□□ -0.76
DDX39B-221ENST00000484566 SLC25A27O95847 323 aa10.33□□□□□ -0.76
DDX39B-221ENST00000484566 TIMP1P01033 207 aa10.33□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 82.8 ms