RNA–Protein interactions for RNA: ENST00000484235.1

SMDT1-203, Transcript of single-pass membrane protein with aspartate rich tail 1, humanhuman

TSL 1 (best)

Gene SMDT1, Length 556 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMDT1-203ENST00000484235 HMGCRP04035 888 aa31.13■■■□□ 2.57
SMDT1-203ENST00000484235 INHAP05111 366 aa31.13■■■□□ 2.57
SMDT1-203ENST00000484235 COL9A3Q14050 684 aaPredicted RBP31.13■■■□□ 2.57
SMDT1-203ENST00000484235 CHST13Q8NET6 341 aa31.13■■■□□ 2.57
SMDT1-203ENST00000484235 AGBL1Q96MI9 1066 aa31.13■■■□□ 2.57
SMDT1-203ENST00000484235 LY9Q9HBG7 655 aa31.13■■■□□ 2.57
SMDT1-203ENST00000484235 FBXO40Q9UH90 709 aa31.13■■■□□ 2.57
SMDT1-203ENST00000484235 PLXNB2O15031 1838 aa31.12■■■□□ 2.57
SMDT1-203ENST00000484235 MYCP01106 439 aaPredicted RBP31.12■■■□□ 2.57
SMDT1-203ENST00000484235 ADCK5Q3MIX3 580 aa31.12■■■□□ 2.57
SMDT1-203ENST00000484235 CCDC174Q6PII3 467 aa31.12■■■□□ 2.57
SMDT1-203ENST00000484235 CATIPQ7Z7H3 387 aa31.12■■■□□ 2.57
SMDT1-203ENST00000484235 TRIB2Q92519 343 aa31.12■■■□□ 2.57
SMDT1-203ENST00000484235 USP26Q9BXU7 913 aa31.12■■■□□ 2.57
SMDT1-203ENST00000484235 ICAM1P05362 532 aa31.11■■■□□ 2.57
SMDT1-203ENST00000484235 HMGB1P09429 215 aaKnown RBP31.11■■■□□ 2.57
SMDT1-203ENST00000484235 LIFRP42702 1097 aa31.11■■■□□ 2.57
SMDT1-203ENST00000484235 TROAPQ12815 778 aa31.11■■■□□ 2.57
SMDT1-203ENST00000484235 TKFCQ3LXA3 575 aa31.11■■■□□ 2.57
SMDT1-203ENST00000484235 DHX32Q7L7V1 743 aaKnown RBP31.11■■■□□ 2.57
SMDT1-203ENST00000484235 UBA5Q9GZZ9 404 aa31.11■■■□□ 2.57
SMDT1-203ENST00000484235 PNMA2Q9UL42 364 aa31.11■■■□□ 2.57
SMDT1-203ENST00000484235 WDR19Q8NEZ3 1342 aa31.1■■■□□ 2.57
SMDT1-203ENST00000484235 SH2B2O14492 632 aaPredicted RBP31.1■■■□□ 2.57
SMDT1-203ENST00000484235 COBLO75128 1261 aa31.1■■■□□ 2.57
SMDT1-203ENST00000484235 EXOSC10Q01780 885 aaKnown RBP31.1■■■□□ 2.57
SMDT1-203ENST00000484235 MTFR1Q15390 333 aa31.1■■■□□ 2.57
SMDT1-203ENST00000484235 CCL14Q16627 93 aa31.1■■■□□ 2.57
SMDT1-203ENST00000484235 DHX30Q7L2E3 1194 aaKnown RBP eCLIP31.1■■■□□ 2.57
SMDT1-203ENST00000484235 GPHNQ9NQX3 736 aaPredicted RBP31.1■■■□□ 2.57
SMDT1-203ENST00000484235 SNX14Q9Y5W7 946 aa31.1■■■□□ 2.57
SMDT1-203ENST00000484235 PALM3A6NDB9 673 aaPredicted RBP31.09■■■□□ 2.57
SMDT1-203ENST00000484235 CCL5P13501 91 aa31.09■■■□□ 2.57
SMDT1-203ENST00000484235 NPLOC4Q8TAT6 608 aa31.09■■■□□ 2.57
SMDT1-203ENST00000484235 CPVLQ9H3G5 476 aa31.09■■■□□ 2.57
SMDT1-203ENST00000484235 MAD2L2Q9UI95 211 aa31.09■■■□□ 2.57
SMDT1-203ENST00000484235 CCPG1Q9ULG6 757 aa31.09■■■□□ 2.57
SMDT1-203ENST00000484235 KLRF2D3W0D1 207 aa31.08■■■□□ 2.57
SMDT1-203ENST00000484235 GRM4Q14833 912 aa31.08■■■□□ 2.57
SMDT1-203ENST00000484235 NFXL1Q6ZNB6 911 aa31.08■■■□□ 2.57
SMDT1-203ENST00000484235 STAG2Q8N3U4 1231 aa31.08■■■□□ 2.57
SMDT1-203ENST00000484235 TRERF1Q96PN7 1200 aa31.08■■■□□ 2.57
SMDT1-203ENST00000484235 HOMER2Q9NSB8 354 aa31.08■■■□□ 2.57
SMDT1-203ENST00000484235 CCDC69A6NI79 296 aa31.07■■■□□ 2.56
SMDT1-203ENST00000484235 EIF5BO60841 1220 aaKnown RBP31.07■■■□□ 2.56
SMDT1-203ENST00000484235 ALAS1P13196 640 aa31.07■■■□□ 2.56
SMDT1-203ENST00000484235 ADGRF4Q8IZF3 695 aa31.07■■■□□ 2.56
SMDT1-203ENST00000484235 DDX11Q96FC9 970 aa31.07■■■□□ 2.56
SMDT1-203ENST00000484235 MAP3K14Q99558 947 aa31.07■■■□□ 2.56
SMDT1-203ENST00000484235 RNF208Q9H0X6 261 aa31.07■■■□□ 2.56
SMDT1-203ENST00000484235 ACAD9Q9H845 621 aa31.07■■■□□ 2.56
SMDT1-203ENST00000484235 RNF146Q9NTX7 359 aa31.07■■■□□ 2.56
SMDT1-203ENST00000484235 PGK2P07205 417 aa31.06■■■□□ 2.56
SMDT1-203ENST00000484235 TRIM32Q13049 653 aa31.06■■■□□ 2.56
SMDT1-203ENST00000484235 MFSD14CQ5VZR4 134 aa31.06■■■□□ 2.56
SMDT1-203ENST00000484235 OLFML2BQ68BL8 750 aa31.06■■■□□ 2.56
SMDT1-203ENST00000484235 ZNF654Q8IZM8 581 aa31.06■■■□□ 2.56
SMDT1-203ENST00000484235 ANKRD35Q8N283 1001 aa31.06■■■□□ 2.56
SMDT1-203ENST00000484235 LRRC2Q9BYS8 371 aa31.06■■■□□ 2.56
SMDT1-203ENST00000484235 UNC93B1Q9H1C4 597 aa31.06■■■□□ 2.56
SMDT1-203ENST00000484235 FLRT1Q9NZU1 646 aa31.06■■■□□ 2.56
SMDT1-203ENST00000484235 DIS3Q9Y2L1 958 aaKnown RBP31.06■■■□□ 2.56
SMDT1-203ENST00000484235 DDAH1O94760 285 aa31.05■■■□□ 2.56
SMDT1-203ENST00000484235 ZNF792Q3KQV3 632 aa31.05■■■□□ 2.56
SMDT1-203ENST00000484235 MAP3K21Q5TCX8 1036 aa31.05■■■□□ 2.56
SMDT1-203ENST00000484235 JAKMIP1Q96N16 626 aaKnown RBP31.05■■■□□ 2.56
SMDT1-203ENST00000484235 ZNF236Q9UL36 1845 aa31.05■■■□□ 2.56
SMDT1-203ENST00000484235 RPTORQ8N122 1335 aa31.04■■■□□ 2.56
SMDT1-203ENST00000484235 IGHA2P01877 340 aa31.04■■■□□ 2.56
SMDT1-203ENST00000484235 PSMA5P28066 241 aa31.04■■■□□ 2.56
SMDT1-203ENST00000484235 SGMS1Q86VZ5 419 aa31.04■■■□□ 2.56
SMDT1-203ENST00000484235 NUP133Q8WUM0 1156 aa31.04■■■□□ 2.56
SMDT1-203ENST00000484235 MAML3Q96JK9 1138 aa31.04■■■□□ 2.56
SMDT1-203ENST00000484235 JMJD4Q9H9V9 463 aa31.04■■■□□ 2.56
SMDT1-203ENST00000484235 VAT1LQ9HCJ6 419 aa31.04■■■□□ 2.56
SMDT1-203ENST00000484235 HMX1Q9NP08 348 aaPredicted RBP31.04■■■□□ 2.56
SMDT1-203ENST00000484235 DNAJC25-GNG10A0A024R161 153 aa31.03■■■□□ 2.56
SMDT1-203ENST00000484235 DHX16O60231 1041 aaKnown RBP31.03■■■□□ 2.56
SMDT1-203ENST00000484235 GJB1P08034 283 aa31.03■■■□□ 2.56
SMDT1-203ENST00000484235 PRKAR2AP13861 404 aaKnown RBP31.03■■■□□ 2.56
SMDT1-203ENST00000484235 CACNB2Q08289 660 aaPredicted RBP31.03■■■□□ 2.56
SMDT1-203ENST00000484235 SLC12A7Q9Y666 1083 aa31.03■■■□□ 2.56
SMDT1-203ENST00000484235 CALM1P0DP23 149 aa31.02■■■□□ 2.56
SMDT1-203ENST00000484235 CALM2P0DP24 149 aa31.02■■■□□ 2.56
SMDT1-203ENST00000484235 CALM3P0DP25 149 aa31.02■■■□□ 2.56
SMDT1-203ENST00000484235 KIF5BP33176 963 aa31.02■■■□□ 2.56
SMDT1-203ENST00000484235 CDC37Q16543 378 aaPredicted RBP31.02■■■□□ 2.56
SMDT1-203ENST00000484235 CTCFLQ8NI51 663 aaPredicted RBP31.02■■■□□ 2.56
SMDT1-203ENST00000484235 SHISA4Q96DD7 197 aa31.02■■■□□ 2.56
SMDT1-203ENST00000484235 PAK6Q9NQU5 681 aaPredicted RBP31.02■■■□□ 2.56
SMDT1-203ENST00000484235 CEP290O15078 2479 aa31.02■■■□□ 2.56
SMDT1-203ENST00000484235 MUM1L1Q5H9M0 696 aa31.01■■■□□ 2.55
SMDT1-203ENST00000484235 BLOC1S2Q6QNY1 142 aa31.01■■■□□ 2.55
SMDT1-203ENST00000484235 TCEANC2Q96MN5 208 aa31.01■■■□□ 2.55
SMDT1-203ENST00000484235 MYL10Q9BUA6 226 aa31.01■■■□□ 2.55
SMDT1-203ENST00000484235 CYP2C19P33261 490 aa31■■■□□ 2.55
SMDT1-203ENST00000484235 SYNE3Q6ZMZ3 975 aa31■■■□□ 2.55
SMDT1-203ENST00000484235 RIOX1Q9H6W3 641 aa31■■■□□ 2.55
SMDT1-203ENST00000484235 A1CFQ9NQ94 594 aaKnown RBP31■■■□□ 2.55
SMDT1-203ENST00000484235 PFASO15067 1338 aa30.99■■■□□ 2.55
Retrieved 100 of 20,778 RNA–protein pairs in 75.4 ms