RNA–Protein interactions for RNA: ENST00000483546.1

RPP40-206, Transcript of ribonuclease P/MRP subunit p40, humanhuman

TSL 3

Gene RPP40, Length 654 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPP40-206ENST00000483546 PLXNA1Q9UIW2 1896 aa18.2■□□□□ 0.5
RPP40-206ENST00000483546 PALM3A6NDB9 673 aaPredicted RBP18.2■□□□□ 0.5
RPP40-206ENST00000483546 HMGCRP04035 888 aa18.2■□□□□ 0.5
RPP40-206ENST00000483546 KIF5BP33176 963 aa18.2■□□□□ 0.5
RPP40-206ENST00000483546 SLC16A2P36021 539 aa18.2■□□□□ 0.5
RPP40-206ENST00000483546 BLOC1S2Q6QNY1 142 aa18.2■□□□□ 0.5
RPP40-206ENST00000483546 NFXL1Q6ZNB6 911 aa18.2■□□□□ 0.5
RPP40-206ENST00000483546 ZNF654Q8IZM8 581 aa18.2■□□□□ 0.5
RPP40-206ENST00000483546 CHMP4CQ96CF2 233 aa18.2■□□□□ 0.5
RPP40-206ENST00000483546 JAKMIP1Q96N16 626 aaKnown RBP18.2■□□□□ 0.5
RPP40-206ENST00000483546 MMP19Q99542 508 aa18.2■□□□□ 0.5
RPP40-206ENST00000483546 HTTP42858 3142 aa18.2■□□□□ 0.5
RPP40-206ENST00000483546 KLRF2D3W0D1 207 aa18.19■□□□□ 0.5
RPP40-206ENST00000483546 GOLGA8HP0CJ92 632 aa18.19■□□□□ 0.5
RPP40-206ENST00000483546 CYP2B6P20813 491 aa18.19■□□□□ 0.5
RPP40-206ENST00000483546 ADORA2AP29274 412 aa18.19■□□□□ 0.5
RPP40-206ENST00000483546 ANAPC15P60006 121 aa18.19■□□□□ 0.5
RPP40-206ENST00000483546 DPP9Q86TI2 863 aa18.19■□□□□ 0.5
RPP40-206ENST00000483546 FBXL16Q8N461 479 aa18.19■□□□□ 0.5
RPP40-206ENST00000483546 CTCFLQ8NI51 663 aaPredicted RBP18.19■□□□□ 0.5
RPP40-206ENST00000483546 TM6SF1Q9BZW5 370 aa18.19■□□□□ 0.5
RPP40-206ENST00000483546 MAF1Q9H063 256 aa18.19■□□□□ 0.5
RPP40-206ENST00000483546 ACAD9Q9H845 621 aa18.19■□□□□ 0.5
RPP40-206ENST00000483546 SENP2Q9HC62 589 aa18.19■□□□□ 0.5
RPP40-206ENST00000483546 MAD2L2Q9UI95 211 aa18.19■□□□□ 0.5
RPP40-206ENST00000483546 DIS3Q9Y2L1 958 aaKnown RBP18.19■□□□□ 0.5
RPP40-206ENST00000483546 SLC12A7Q9Y666 1083 aa18.19■□□□□ 0.5
RPP40-206ENST00000483546 SMARCA1P28370 1054 aa18.18■□□□□ 0.5
RPP40-206ENST00000483546 GNAQP50148 359 aa18.18■□□□□ 0.5
RPP40-206ENST00000483546 RCAN1P53805 252 aa18.18■□□□□ 0.5
RPP40-206ENST00000483546 CCDC174Q6PII3 467 aa18.18■□□□□ 0.5
RPP40-206ENST00000483546 SYNE3Q6ZMZ3 975 aa18.18■□□□□ 0.5
RPP40-206ENST00000483546 LZTS2Q9BRK4 669 aa18.18■□□□□ 0.5
RPP40-206ENST00000483546 BIN2Q9UBW5 565 aaPredicted RBP18.18■□□□□ 0.5
RPP40-206ENST00000483546 CCPG1Q9ULG6 757 aa18.18■□□□□ 0.5
RPP40-206ENST00000483546 RIPK3Q9Y572 518 aa18.18■□□□□ 0.5
RPP40-206ENST00000483546 CCDC85CA6NKD9 419 aa18.17■□□□□ 0.5
RPP40-206ENST00000483546 CAPN2P17655 700 aa18.17■□□□□ 0.5
RPP40-206ENST00000483546 TRAF1Q13077 416 aa18.17■□□□□ 0.5
RPP40-206ENST00000483546 OLFML2BQ68BL8 750 aa18.17■□□□□ 0.5
RPP40-206ENST00000483546 ADGRF4Q8IZF3 695 aa18.17■□□□□ 0.5
RPP40-206ENST00000483546 SH3TC2Q8TF17 1288 aa18.17■□□□□ 0.5
RPP40-206ENST00000483546 AGBL1Q96MI9 1066 aa18.17■□□□□ 0.5
RPP40-206ENST00000483546 UBA5Q9GZZ9 404 aa18.17■□□□□ 0.5
RPP40-206ENST00000483546 RNF146Q9NTX7 359 aa18.17■□□□□ 0.5
RPP40-206ENST00000483546 PFASO15067 1338 aa18.17■□□□□ 0.5
RPP40-206ENST00000483546 DHX16O60231 1041 aaKnown RBP18.16■□□□□ 0.5
RPP40-206ENST00000483546 INHAP05111 366 aa18.16■□□□□ 0.5
RPP40-206ENST00000483546 ALAS1P13196 640 aa18.16■□□□□ 0.5
RPP40-206ENST00000483546 ELNP15502 786 aa18.16■□□□□ 0.5
RPP40-206ENST00000483546 CASTP20810 708 aaKnown RBP18.16■□□□□ 0.5
RPP40-206ENST00000483546 RPS6KB1P23443 525 aa18.16■□□□□ 0.5
RPP40-206ENST00000483546 FGD1P98174 961 aa18.16■□□□□ 0.5
RPP40-206ENST00000483546 CDC37Q16543 378 aaPredicted RBP18.16■□□□□ 0.5
RPP40-206ENST00000483546 STAG2Q8N3U4 1231 aa18.16■□□□□ 0.5
RPP40-206ENST00000483546 NUP133Q8WUM0 1156 aa18.16■□□□□ 0.5
RPP40-206ENST00000483546 TRIB2Q92519 343 aa18.16■□□□□ 0.5
RPP40-206ENST00000483546 TRERF1Q96PN7 1200 aa18.16■□□□□ 0.5
RPP40-206ENST00000483546 TMEM106CQ9BVX2 250 aa18.16■□□□□ 0.5
RPP40-206ENST00000483546 ZSWIM6Q9HCJ5 1215 aa18.16■□□□□ 0.5
RPP40-206ENST00000483546 GPHNQ9NQX3 736 aaPredicted RBP18.16■□□□□ 0.5
RPP40-206ENST00000483546 SMCHD1A6NHR9 2005 aa18.16■□□□□ 0.5
RPP40-206ENST00000483546 SLC4A3P48751 1232 aa18.15■□□□□ 0.5
RPP40-206ENST00000483546 COL9A3Q14050 684 aaPredicted RBP18.15■□□□□ 0.5
RPP40-206ENST00000483546 PPP2R5BQ15173 497 aa18.15■□□□□ 0.5
RPP40-206ENST00000483546 MFSD14CQ5VZR4 134 aa18.15■□□□□ 0.5
RPP40-206ENST00000483546 RUFY3Q7L099 469 aa18.15■□□□□ 0.5
RPP40-206ENST00000483546 ANKRD35Q8N283 1001 aa18.15■□□□□ 0.5
RPP40-206ENST00000483546 MSL3Q8N5Y2 521 aaKnown RBP18.15■□□□□ 0.5
RPP40-206ENST00000483546 MTMR8Q96EF0 704 aa18.15■□□□□ 0.5
RPP40-206ENST00000483546 IL17RAQ96F46 866 aa18.15■□□□□ 0.5
RPP40-206ENST00000483546 DDX11Q96FC9 970 aa18.15■□□□□ 0.5
RPP40-206ENST00000483546 SPZ1Q9BXG8 430 aa18.15■□□□□ 0.5
RPP40-206ENST00000483546 LRRC2Q9BYS8 371 aa18.15■□□□□ 0.5
RPP40-206ENST00000483546 AGXT2Q9BYV1 514 aa18.15■□□□□ 0.5
RPP40-206ENST00000483546 RIOX1Q9H6W3 641 aa18.15■□□□□ 0.5
RPP40-206ENST00000483546 JMJD4Q9H9V9 463 aa18.15■□□□□ 0.5
RPP40-206ENST00000483546 GTF3C3Q9Y5Q9 886 aa18.15■□□□□ 0.5
RPP40-206ENST00000483546 CYP46A1Q9Y6A2 500 aa18.15■□□□□ 0.5
RPP40-206ENST00000483546 DNAJC25-GNG10A0A024R161 153 aa18.14■□□□□ 0.49
RPP40-206ENST00000483546 COBLO75128 1261 aa18.14■□□□□ 0.49
RPP40-206ENST00000483546 SNAP25P60880 206 aa18.14■□□□□ 0.49
RPP40-206ENST00000483546 ZNF792Q3KQV3 632 aa18.14■□□□□ 0.49
RPP40-206ENST00000483546 C8orf34Q49A92 452 aa18.14■□□□□ 0.49
RPP40-206ENST00000483546 MAP3K21Q5TCX8 1036 aa18.14■□□□□ 0.49
RPP40-206ENST00000483546 APOA5Q6Q788 366 aa18.14■□□□□ 0.49
RPP40-206ENST00000483546 ZNF467Q7Z7K2 595 aaPredicted RBP18.14■□□□□ 0.49
RPP40-206ENST00000483546 NPLOC4Q8TAT6 608 aa18.14■□□□□ 0.49
RPP40-206ENST00000483546 HOMER2Q9NSB8 354 aa18.14■□□□□ 0.49
RPP40-206ENST00000483546 RBM28Q9NW13 759 aaKnown RBP18.14■□□□□ 0.49
RPP40-206ENST00000483546 ABCB11O95342 1321 aa18.14■□□□□ 0.49
RPP40-206ENST00000483546 KIAA0100Q14667 2235 aaKnown RBP18.14■□□□□ 0.49
RPP40-206ENST00000483546 BAZ2BQ9UIF8 2168 aaKnown RBP18.13■□□□□ 0.49
RPP40-206ENST00000483546 ZBTB5O15062 677 aa18.13■□□□□ 0.49
RPP40-206ENST00000483546 IGHA2P01877 340 aa18.13■□□□□ 0.49
RPP40-206ENST00000483546 QRICH1Q2TAL8 776 aa18.13■□□□□ 0.49
RPP40-206ENST00000483546 IFFO2Q5TF58 517 aa18.13■□□□□ 0.49
RPP40-206ENST00000483546 Q6ZUG5 572 aa18.13■□□□□ 0.49
RPP40-206ENST00000483546 FANCBQ8NB91 859 aa18.13■□□□□ 0.49
RPP40-206ENST00000483546 MAML3Q96JK9 1138 aa18.13■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms