RNA–Protein interactions for RNA: ENST00000483506.1

HDAC6-225, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 545 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-225ENST00000483506 SHISA4Q96DD7 197 aa21.08■□□□□ 0.97
HDAC6-225ENST00000483506 XRN2Q9H0D6 950 aaKnown RBP eCLIP21.08■□□□□ 0.97
HDAC6-225ENST00000483506 GPCPD1Q9NPB8 672 aa21.08■□□□□ 0.97
HDAC6-225ENST00000483506 MKI67P46013 3256 aaKnown RBP21.07■□□□□ 0.96
HDAC6-225ENST00000483506 DNAJC25-GNG10A0A024R161 153 aa21.07■□□□□ 0.96
HDAC6-225ENST00000483506 IFIT3O14879 490 aaKnown RBP21.07■□□□□ 0.96
HDAC6-225ENST00000483506 ICAM1P05362 532 aa21.07■□□□□ 0.96
HDAC6-225ENST00000483506 CACNB2Q08289 660 aaPredicted RBP21.07■□□□□ 0.96
HDAC6-225ENST00000483506 ZNF792Q3KQV3 632 aa21.07■□□□□ 0.96
HDAC6-225ENST00000483506 IGDCC4Q8TDY8 1250 aa21.07■□□□□ 0.96
HDAC6-225ENST00000483506 AGBL1Q96MI9 1066 aa21.07■□□□□ 0.96
HDAC6-225ENST00000483506 TNRC18O15417 2968 aaPredicted RBP21.07■□□□□ 0.96
HDAC6-225ENST00000483506 ERICH2A1L162 156 aa21.06■□□□□ 0.96
HDAC6-225ENST00000483506 MLLT1Q03111 559 aaPredicted RBP21.06■□□□□ 0.96
HDAC6-225ENST00000483506 MFSD14CQ5VZR4 134 aa21.06■□□□□ 0.96
HDAC6-225ENST00000483506 U2AF1L4Q8WU68 220 aaKnown RBP21.06■□□□□ 0.96
HDAC6-225ENST00000483506 KCNB2Q92953 911 aa21.06■□□□□ 0.96
HDAC6-225ENST00000483506 MAML3Q96JK9 1138 aa21.06■□□□□ 0.96
HDAC6-225ENST00000483506 CRISPLD2Q9H0B8 497 aa21.06■□□□□ 0.96
HDAC6-225ENST00000483506 HMX1Q9NP08 348 aaPredicted RBP21.06■□□□□ 0.96
HDAC6-225ENST00000483506 PNMA2Q9UL42 364 aa21.06■□□□□ 0.96
HDAC6-225ENST00000483506 EPB41L2O43491 1005 aaKnown RBP21.05■□□□□ 0.96
HDAC6-225ENST00000483506 SGPL1O95470 568 aa21.05■□□□□ 0.96
HDAC6-225ENST00000483506 PARP1P09874 1014 aaKnown RBP21.05■□□□□ 0.96
HDAC6-225ENST00000483506 GOLGA8HP0CJ92 632 aa21.05■□□□□ 0.96
HDAC6-225ENST00000483506 MCM5P33992 734 aa21.05■□□□□ 0.96
HDAC6-225ENST00000483506 WTAPQ15007 396 aa21.05■□□□□ 0.96
HDAC6-225ENST00000483506 ACAD9Q9H845 621 aa21.05■□□□□ 0.96
HDAC6-225ENST00000483506 SENP2Q9HC62 589 aa21.05■□□□□ 0.96
HDAC6-225ENST00000483506 SMCHD1A6NHR9 2005 aa21.05■□□□□ 0.96
HDAC6-225ENST00000483506 WDR19Q8NEZ3 1342 aa21.04■□□□□ 0.96
HDAC6-225ENST00000483506 REC8O95072 547 aa21.04■□□□□ 0.96
HDAC6-225ENST00000483506 PGK2P07205 417 aa21.04■□□□□ 0.96
HDAC6-225ENST00000483506 SNAP25P60880 206 aa21.04■□□□□ 0.96
HDAC6-225ENST00000483506 TMEM67Q5HYA8 995 aa21.04■□□□□ 0.96
HDAC6-225ENST00000483506 CCDC174Q6PII3 467 aa21.04■□□□□ 0.96
HDAC6-225ENST00000483506 CHST3Q7LGC8 479 aa21.04■□□□□ 0.96
HDAC6-225ENST00000483506 TMEM87BQ96K49 555 aa21.04■□□□□ 0.96
HDAC6-225ENST00000483506 LY9Q9HBG7 655 aa21.04■□□□□ 0.96
HDAC6-225ENST00000483506 RNF146Q9NTX7 359 aa21.04■□□□□ 0.96
HDAC6-225ENST00000483506 CCPG1Q9ULG6 757 aa21.04■□□□□ 0.96
HDAC6-225ENST00000483506 PRC1O43663 620 aa21.03■□□□□ 0.96
HDAC6-225ENST00000483506 CYBAP13498 195 aa21.03■□□□□ 0.96
HDAC6-225ENST00000483506 TROAPQ12815 778 aa21.03■□□□□ 0.96
HDAC6-225ENST00000483506 COL9A3Q14050 684 aaPredicted RBP21.03■□□□□ 0.96
HDAC6-225ENST00000483506 GRM4Q14833 912 aa21.03■□□□□ 0.96
HDAC6-225ENST00000483506 ZNF467Q7Z7K2 595 aaPredicted RBP21.03■□□□□ 0.96
HDAC6-225ENST00000483506 RASEFQ8IZ41 740 aa21.03■□□□□ 0.96
HDAC6-225ENST00000483506 MSL3Q8N5Y2 521 aaKnown RBP21.03■□□□□ 0.96
HDAC6-225ENST00000483506 DEFB118Q96PH6 123 aa21.03■□□□□ 0.96
HDAC6-225ENST00000483506 TRERF1Q96PN7 1200 aa21.03■□□□□ 0.96
HDAC6-225ENST00000483506 MAD2L2Q9UI95 211 aa21.03■□□□□ 0.96
HDAC6-225ENST00000483506 PALM3A6NDB9 673 aaPredicted RBP21.02■□□□□ 0.96
HDAC6-225ENST00000483506 SH2B2O14492 632 aaPredicted RBP21.02■□□□□ 0.96
HDAC6-225ENST00000483506 ALAS1P13196 640 aa21.02■□□□□ 0.96
HDAC6-225ENST00000483506 CYP2C19P33261 490 aa21.02■□□□□ 0.96
HDAC6-225ENST00000483506 HSPA4P34932 840 aa21.02■□□□□ 0.96
HDAC6-225ENST00000483506 KRT32Q14532 448 aa21.02■□□□□ 0.96
HDAC6-225ENST00000483506 UBE2Q1Q7Z7E8 422 aa21.02■□□□□ 0.96
HDAC6-225ENST00000483506 ANKRD35Q8N283 1001 aa21.02■□□□□ 0.96
HDAC6-225ENST00000483506 UBA5Q9GZZ9 404 aa21.02■□□□□ 0.96
HDAC6-225ENST00000483506 A1CFQ9NQ94 594 aaKnown RBP21.02■□□□□ 0.96
HDAC6-225ENST00000483506 HOMER2Q9NSB8 354 aa21.02■□□□□ 0.96
HDAC6-225ENST00000483506 NRBP1Q9UHY1 535 aa21.02■□□□□ 0.96
HDAC6-225ENST00000483506 PFASO15067 1338 aa21.02■□□□□ 0.95
HDAC6-225ENST00000483506 FRMPD3Q5JV73 1810 aa21.01■□□□□ 0.95
HDAC6-225ENST00000483506 CCND3P30281 292 aaPredicted RBP21.01■□□□□ 0.95
HDAC6-225ENST00000483506 LIFRP42702 1097 aa21.01■□□□□ 0.95
HDAC6-225ENST00000483506 SLC4A3P48751 1232 aa21.01■□□□□ 0.95
HDAC6-225ENST00000483506 MAMDC4Q6UXC1 1216 aa21.01■□□□□ 0.95
HDAC6-225ENST00000483506 ADGRF4Q8IZF3 695 aa21.01■□□□□ 0.95
HDAC6-225ENST00000483506 TMTC2Q8N394 836 aa21.01■□□□□ 0.95
HDAC6-225ENST00000483506 STAG2Q8N3U4 1231 aa21.01■□□□□ 0.95
HDAC6-225ENST00000483506 TRPV1Q8NER1 839 aa21.01■□□□□ 0.95
HDAC6-225ENST00000483506 DDX11Q96FC9 970 aa21.01■□□□□ 0.95
HDAC6-225ENST00000483506 FGD4Q96M96 766 aa21.01■□□□□ 0.95
HDAC6-225ENST00000483506 NEK1Q96PY6 1258 aa21.01■□□□□ 0.95
HDAC6-225ENST00000483506 MAP3K14Q99558 947 aa21.01■□□□□ 0.95
HDAC6-225ENST00000483506 TINF2Q9BSI4 451 aa21.01■□□□□ 0.95
HDAC6-225ENST00000483506 CPVLQ9H3G5 476 aa21.01■□□□□ 0.95
HDAC6-225ENST00000483506 PDE4DIPQ5VU43 2346 aa21■□□□□ 0.95
HDAC6-225ENST00000483506 LCTP09848 1927 aa21■□□□□ 0.95
HDAC6-225ENST00000483506 MUM1L1Q5H9M0 696 aa21■□□□□ 0.95
HDAC6-225ENST00000483506 CATIPQ7Z7H3 387 aa21■□□□□ 0.95
HDAC6-225ENST00000483506 FAM133AQ8N9E0 248 aa21■□□□□ 0.95
HDAC6-225ENST00000483506 MTMR8Q96EF0 704 aa21■□□□□ 0.95
HDAC6-225ENST00000483506 JMJD4Q9H9V9 463 aa21■□□□□ 0.95
HDAC6-225ENST00000483506 OGDHLQ9ULD0 1010 aa21■□□□□ 0.95
HDAC6-225ENST00000483506 SYNGAP1Q96PV0 1343 aa21■□□□□ 0.95
HDAC6-225ENST00000483506 KLRF2D3W0D1 207 aa20.99■□□□□ 0.95
HDAC6-225ENST00000483506 DDAH1O94760 285 aa20.99■□□□□ 0.95
HDAC6-225ENST00000483506 EXOSC10Q01780 885 aaKnown RBP20.99■□□□□ 0.95
HDAC6-225ENST00000483506 CDC37Q16543 378 aaPredicted RBP20.99■□□□□ 0.95
HDAC6-225ENST00000483506 ADCK5Q3MIX3 580 aa20.99■□□□□ 0.95
HDAC6-225ENST00000483506 LHX8Q68G74 356 aa20.99■□□□□ 0.95
HDAC6-225ENST00000483506 SGMS1Q86VZ5 419 aa20.99■□□□□ 0.95
HDAC6-225ENST00000483506 ANKLE1Q8NAG6 615 aa20.99■□□□□ 0.95
HDAC6-225ENST00000483506 MAF1Q9H063 256 aa20.99■□□□□ 0.95
HDAC6-225ENST00000483506 GPHNQ9NQX3 736 aaPredicted RBP20.99■□□□□ 0.95
HDAC6-225ENST00000483506 CYP39A1Q9NYL5 469 aa20.99■□□□□ 0.95
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms