RNA–Protein interactions for RNA: ENST00000483417.1

HMG20B-210, Transcript of high mobility group 20B, humanhuman

TSL 3

Gene HMG20B, Length 580 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMG20B-210ENST00000483417 DHX32Q7L7V1 743 aaKnown RBP11.27□□□□□ -0.61
HMG20B-210ENST00000483417 SLF1Q9BQI6 1058 aa11.27□□□□□ -0.61
HMG20B-210ENST00000483417 C22orf23Q9BZE7 217 aa11.27□□□□□ -0.61
HMG20B-210ENST00000483417 CNNM2Q9H8M5 875 aa11.27□□□□□ -0.61
HMG20B-210ENST00000483417 ZSWIM6Q9HCJ5 1215 aa11.27□□□□□ -0.61
HMG20B-210ENST00000483417 STX8Q9UNK0 236 aa11.27□□□□□ -0.61
HMG20B-210ENST00000483417 MTMR7Q9Y216 660 aa11.27□□□□□ -0.61
HMG20B-210ENST00000483417 DIS3Q9Y2L1 958 aaKnown RBP11.27□□□□□ -0.61
HMG20B-210ENST00000483417 COL11A1P12107 1806 aaPredicted RBP11.26□□□□□ -0.61
HMG20B-210ENST00000483417 DNAJC25-GNG10A0A024R161 153 aa11.26□□□□□ -0.61
HMG20B-210ENST00000483417 IFIT3O14879 490 aaKnown RBP11.26□□□□□ -0.61
HMG20B-210ENST00000483417 RAD21O60216 631 aa11.26□□□□□ -0.61
HMG20B-210ENST00000483417 MSCO60682 206 aa11.26□□□□□ -0.61
HMG20B-210ENST00000483417 TTBK2Q6IQ55 1244 aa11.26□□□□□ -0.61
HMG20B-210ENST00000483417 CHRDL2Q6WN34 429 aa11.26□□□□□ -0.61
HMG20B-210ENST00000483417 DHX30Q7L2E3 1194 aaKnown RBP eCLIP11.26□□□□□ -0.61
HMG20B-210ENST00000483417 DGKHQ86XP1 1220 aa11.26□□□□□ -0.61
HMG20B-210ENST00000483417 RAB11FIP4Q86YS3 637 aa11.26□□□□□ -0.61
HMG20B-210ENST00000483417 TTC14Q96N46 770 aa11.26□□□□□ -0.61
HMG20B-210ENST00000483417 MMP19Q99542 508 aa11.26□□□□□ -0.61
HMG20B-210ENST00000483417 TEX13BQ9BXU2 312 aa11.26□□□□□ -0.61
HMG20B-210ENST00000483417 UPF3BQ9BZI7 483 aaKnown RBP11.26□□□□□ -0.61
HMG20B-210ENST00000483417 SLC38A10Q9HBR0 1119 aa11.26□□□□□ -0.61
HMG20B-210ENST00000483417 RBM27Q9P2N5 1060 aaKnown RBP11.26□□□□□ -0.61
HMG20B-210ENST00000483417 FEM1BQ9UK73 627 aa11.26□□□□□ -0.61
HMG20B-210ENST00000483417 ALPK3Q96L96 1907 aa11.26□□□□□ -0.61
HMG20B-210ENST00000483417 TNKSO95271 1327 aa11.26□□□□□ -0.61
HMG20B-210ENST00000483417 ZNFX1Q9P2E3 1918 aaKnown RBP11.25□□□□□ -0.61
HMG20B-210ENST00000483417 SEPT4O43236 478 aa11.25□□□□□ -0.61
HMG20B-210ENST00000483417 PLA2G6O60733 806 aa11.25□□□□□ -0.61
HMG20B-210ENST00000483417 PGK2P07205 417 aa11.25□□□□□ -0.61
HMG20B-210ENST00000483417 BMP3P12645 472 aa11.25□□□□□ -0.61
HMG20B-210ENST00000483417 CASTP20810 708 aaKnown RBP11.25□□□□□ -0.61
HMG20B-210ENST00000483417 MCM5P33992 734 aa11.25□□□□□ -0.61
HMG20B-210ENST00000483417 COPB2P35606 906 aa11.25□□□□□ -0.61
HMG20B-210ENST00000483417 TMEM67Q5HYA8 995 aa11.25□□□□□ -0.61
HMG20B-210ENST00000483417 Q6ZUG5 572 aa11.25□□□□□ -0.61
HMG20B-210ENST00000483417 RALYLQ86SE5 291 aaKnown RBP11.25□□□□□ -0.61
HMG20B-210ENST00000483417 GMCL1Q96IK5 515 aa11.25□□□□□ -0.61
HMG20B-210ENST00000483417 CPVLQ9H3G5 476 aa11.25□□□□□ -0.61
HMG20B-210ENST00000483417 LY9Q9HBG7 655 aa11.25□□□□□ -0.61
HMG20B-210ENST00000483417 SLC5A4Q9NY91 659 aa11.25□□□□□ -0.61
HMG20B-210ENST00000483417 BRPF3Q9ULD4 1205 aa11.25□□□□□ -0.61
HMG20B-210ENST00000483417 LAMA4Q16363 1823 aa11.24□□□□□ -0.61
HMG20B-210ENST00000483417 SH2B2O14492 632 aaPredicted RBP11.24□□□□□ -0.61
HMG20B-210ENST00000483417 DTNBO60941 627 aa11.24□□□□□ -0.61
HMG20B-210ENST00000483417 ZBED4O75132 1171 aa11.24□□□□□ -0.61
HMG20B-210ENST00000483417 GOLGA8HP0CJ92 632 aa11.24□□□□□ -0.61
HMG20B-210ENST00000483417 TOP1P11387 765 aaKnown RBP11.24□□□□□ -0.61
HMG20B-210ENST00000483417 RPS6KB1P23443 525 aa11.24□□□□□ -0.61
HMG20B-210ENST00000483417 CNGA1P29973 690 aa11.24□□□□□ -0.61
HMG20B-210ENST00000483417 RBM25P49756 843 aaKnown RBP11.24□□□□□ -0.61
HMG20B-210ENST00000483417 OAZ1P54368 228 aa11.24□□□□□ -0.61
HMG20B-210ENST00000483417 KRT32Q14532 448 aa11.24□□□□□ -0.61
HMG20B-210ENST00000483417 KCTD2Q14681 263 aa11.24□□□□□ -0.61
HMG20B-210ENST00000483417 LRRC26Q2I0M4 334 aa11.24□□□□□ -0.61
HMG20B-210ENST00000483417 SNRNP48Q6IEG0 339 aaKnown RBP11.24□□□□□ -0.61
HMG20B-210ENST00000483417 BLOC1S2Q6QNY1 142 aa11.24□□□□□ -0.61
HMG20B-210ENST00000483417 KCTD1Q719H9 257 aa11.24□□□□□ -0.61
HMG20B-210ENST00000483417 RUFY3Q7L099 469 aa11.24□□□□□ -0.61
HMG20B-210ENST00000483417 IQCA1Q86XH1 822 aa11.24□□□□□ -0.61
HMG20B-210ENST00000483417 KIFC2Q96AC6 838 aa11.24□□□□□ -0.61
HMG20B-210ENST00000483417 IL17RAQ96F46 866 aa11.24□□□□□ -0.61
HMG20B-210ENST00000483417 GDF15Q99988 308 aa11.24□□□□□ -0.61
HMG20B-210ENST00000483417 TINF2Q9BSI4 451 aa11.24□□□□□ -0.61
HMG20B-210ENST00000483417 MYL10Q9BUA6 226 aa11.24□□□□□ -0.61
HMG20B-210ENST00000483417 RAVER2Q9HCJ3 691 aaKnown RBP11.24□□□□□ -0.61
HMG20B-210ENST00000483417 NRBP1Q9UHY1 535 aa11.24□□□□□ -0.61
HMG20B-210ENST00000483417 MYH4Q9Y623 1939 aa11.24□□□□□ -0.61
HMG20B-210ENST00000483417 ZNF536O15090 1300 aa11.24□□□□□ -0.61
HMG20B-210ENST00000483417 TMEM232C9JQI7 657 aa11.23□□□□□ -0.61
HMG20B-210ENST00000483417 DNM1LO00429 736 aa11.23□□□□□ -0.61
HMG20B-210ENST00000483417 SNAI1O95863 264 aaPredicted RBP11.23□□□□□ -0.61
HMG20B-210ENST00000483417 ZNF865P0CJ78 1059 aaPredicted RBP11.23□□□□□ -0.61
HMG20B-210ENST00000483417 FDX1P10109 184 aa11.23□□□□□ -0.61
HMG20B-210ENST00000483417 TAL1P17542 331 aaPredicted RBP11.23□□□□□ -0.61
HMG20B-210ENST00000483417 RXRAP19793 462 aa11.23□□□□□ -0.61
HMG20B-210ENST00000483417 BMP8BP34820 402 aa11.23□□□□□ -0.61
HMG20B-210ENST00000483417 SLC16A2P36021 539 aa11.23□□□□□ -0.61
HMG20B-210ENST00000483417 SNAP25P60880 206 aa11.23□□□□□ -0.61
HMG20B-210ENST00000483417 TOB2Q14106 344 aaPredicted RBP11.23□□□□□ -0.61
HMG20B-210ENST00000483417 WTAPQ15007 396 aa11.23□□□□□ -0.61
HMG20B-210ENST00000483417 SLC35G1Q2M3R5 365 aa11.23□□□□□ -0.61
HMG20B-210ENST00000483417 PPP4R3BQ5MIZ7 849 aa11.23□□□□□ -0.61
HMG20B-210ENST00000483417 IFIT1BQ5T764 474 aaKnown RBP11.23□□□□□ -0.61
HMG20B-210ENST00000483417 MAMDC4Q6UXC1 1216 aa11.23□□□□□ -0.61
HMG20B-210ENST00000483417 C7orf61Q8IZ16 206 aa11.23□□□□□ -0.61
HMG20B-210ENST00000483417 CPXCR1Q8N123 301 aa11.23□□□□□ -0.61
HMG20B-210ENST00000483417 STAG2Q8N3U4 1231 aa11.23□□□□□ -0.61
HMG20B-210ENST00000483417 FGD4Q96M96 766 aa11.23□□□□□ -0.61
HMG20B-210ENST00000483417 UBAC1Q9BSL1 405 aa11.23□□□□□ -0.61
HMG20B-210ENST00000483417 TM6SF1Q9BZW5 370 aa11.23□□□□□ -0.61
HMG20B-210ENST00000483417 UBA5Q9GZZ9 404 aa11.23□□□□□ -0.61
HMG20B-210ENST00000483417 GPCPD1Q9NPB8 672 aa11.23□□□□□ -0.61
HMG20B-210ENST00000483417 FRMPD2Q68DX3 1309 aaPredicted RBP11.23□□□□□ -0.61
HMG20B-210ENST00000483417 FRMPD3Q5JV73 1810 aa11.23□□□□□ -0.61
HMG20B-210ENST00000483417 PDHBP11177 359 aa11.22□□□□□ -0.61
HMG20B-210ENST00000483417 SLC1A4P43007 532 aa11.22□□□□□ -0.61
HMG20B-210ENST00000483417 ANAPC15P60006 121 aa11.22□□□□□ -0.61
HMG20B-210ENST00000483417 APOBRQ0VD83 1088 aa11.22□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms