RNA–Protein interactions for RNA: ENST00000481281.5

HDAC1-207, Transcript of histone deacetylase 1, humanhuman

TSL 5

Gene HDAC1, Length 721 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC1-207ENST00000481281 TAF6LQ9Y6J9 622 aa15.31■□□□□ 0.04
HDAC1-207ENST00000481281 SMCHD1A6NHR9 2005 aa15.31■□□□□ 0.04
HDAC1-207ENST00000481281 MSCO60682 206 aa15.3■□□□□ 0.04
HDAC1-207ENST00000481281 ICAM1P05362 532 aa15.3■□□□□ 0.04
HDAC1-207ENST00000481281 SLC16A2P36021 539 aa15.3■□□□□ 0.04
HDAC1-207ENST00000481281 SLC4A3P48751 1232 aa15.3■□□□□ 0.04
HDAC1-207ENST00000481281 SEC23AQ15436 765 aa15.3■□□□□ 0.04
HDAC1-207ENST00000481281 TKFCQ3LXA3 575 aa15.3■□□□□ 0.04
HDAC1-207ENST00000481281 GPATCH4Q5T3I0 446 aaKnown RBP15.3■□□□□ 0.04
HDAC1-207ENST00000481281 STOX1Q6ZVD7 989 aa15.3■□□□□ 0.04
HDAC1-207ENST00000481281 CYB5R4Q7L1T6 521 aa15.3■□□□□ 0.04
HDAC1-207ENST00000481281 DIS3LQ8TF46 1054 aaKnown RBP15.3■□□□□ 0.04
HDAC1-207ENST00000481281 TINF2Q9BSI4 451 aa15.3■□□□□ 0.04
HDAC1-207ENST00000481281 UBAC1Q9BSL1 405 aa15.3■□□□□ 0.04
HDAC1-207ENST00000481281 LSG1Q9H089 658 aaKnown RBP15.3■□□□□ 0.04
HDAC1-207ENST00000481281 ACAD9Q9H845 621 aa15.3■□□□□ 0.04
HDAC1-207ENST00000481281 KAT14Q9H8E8 782 aa15.3■□□□□ 0.04
HDAC1-207ENST00000481281 GPCPD1Q9NPB8 672 aa15.3■□□□□ 0.04
HDAC1-207ENST00000481281 RNF146Q9NTX7 359 aa15.3■□□□□ 0.04
HDAC1-207ENST00000481281 DDX20Q9UHI6 824 aaKnown RBP15.3■□□□□ 0.04
HDAC1-207ENST00000481281 NRBP1Q9UHY1 535 aa15.3■□□□□ 0.04
HDAC1-207ENST00000481281 LCTP09848 1927 aa15.29■□□□□ 0.04
HDAC1-207ENST00000481281 E7EWF7 191 aa15.29■□□□□ 0.04
HDAC1-207ENST00000481281 SNAP25P60880 206 aa15.29■□□□□ 0.04
HDAC1-207ENST00000481281 TRDNQ13061 729 aa15.29■□□□□ 0.04
HDAC1-207ENST00000481281 CCDC174Q6PII3 467 aa15.29■□□□□ 0.04
HDAC1-207ENST00000481281 KIAA1211Q6ZU35 1233 aa15.29■□□□□ 0.04
HDAC1-207ENST00000481281 ZNF467Q7Z7K2 595 aaPredicted RBP15.29■□□□□ 0.04
HDAC1-207ENST00000481281 MSL3Q8N5Y2 521 aaKnown RBP15.29■□□□□ 0.04
HDAC1-207ENST00000481281 DDX11Q96FC9 970 aa15.29■□□□□ 0.04
HDAC1-207ENST00000481281 PAWRQ96IZ0 340 aaKnown RBP15.29■□□□□ 0.04
HDAC1-207ENST00000481281 FGD4Q96M96 766 aa15.29■□□□□ 0.04
HDAC1-207ENST00000481281 HTATIP2Q9BUP3 242 aa15.29■□□□□ 0.04
HDAC1-207ENST00000481281 HOMER2Q9NSB8 354 aa15.29■□□□□ 0.04
HDAC1-207ENST00000481281 MCM3APO60318 1980 aa15.29■□□□□ 0.04
HDAC1-207ENST00000481281 SEPT4O43236 478 aa15.28■□□□□ 0.04
HDAC1-207ENST00000481281 ALAS1P13196 640 aa15.28■□□□□ 0.04
HDAC1-207ENST00000481281 CNGA1P29973 690 aa15.28■□□□□ 0.04
HDAC1-207ENST00000481281 MAMDC4Q6UXC1 1216 aa15.28■□□□□ 0.04
HDAC1-207ENST00000481281 NECAB2Q7Z6G3 386 aa15.28■□□□□ 0.04
HDAC1-207ENST00000481281 ANKRD35Q8N283 1001 aa15.28■□□□□ 0.04
HDAC1-207ENST00000481281 NCOA7Q8NI08 942 aa15.28■□□□□ 0.04
HDAC1-207ENST00000481281 A1CFQ9NQ94 594 aaKnown RBP15.28■□□□□ 0.04
HDAC1-207ENST00000481281 CCPG1Q9ULG6 757 aa15.28■□□□□ 0.04
HDAC1-207ENST00000481281 PFASO15067 1338 aa15.27■□□□□ 0.04
HDAC1-207ENST00000481281 WDR19Q8NEZ3 1342 aa15.27■□□□□ 0.04
HDAC1-207ENST00000481281 SYNGAP1Q96PV0 1343 aa15.27■□□□□ 0.04
HDAC1-207ENST00000481281 LRRC37A2A6NM11 1700 aa15.27■□□□□ 0.04
HDAC1-207ENST00000481281 GOLGA8HP0CJ92 632 aa15.27■□□□□ 0.04
HDAC1-207ENST00000481281 COL6A1P12109 1028 aa15.27■□□□□ 0.04
HDAC1-207ENST00000481281 ASPRV1Q53RT3 343 aa15.27■□□□□ 0.04
HDAC1-207ENST00000481281 MUM1L1Q5H9M0 696 aa15.27■□□□□ 0.04
HDAC1-207ENST00000481281 PRAMEF19Q5SWL8 479 aa15.27■□□□□ 0.04
HDAC1-207ENST00000481281 IFIT1BQ5T764 474 aaKnown RBP15.27■□□□□ 0.04
HDAC1-207ENST00000481281 RALYLQ86SE5 291 aaKnown RBP15.27■□□□□ 0.04
HDAC1-207ENST00000481281 FAM133AQ8N9E0 248 aa15.27■□□□□ 0.04
HDAC1-207ENST00000481281 TRERF1Q96PN7 1200 aa15.27■□□□□ 0.04
HDAC1-207ENST00000481281 MYH6P13533 1939 aa15.26■□□□□ 0.03
HDAC1-207ENST00000481281 CDC45O75419 566 aa15.26■□□□□ 0.03
HDAC1-207ENST00000481281 TAL1P17542 331 aaPredicted RBP15.26■□□□□ 0.03
HDAC1-207ENST00000481281 NECTIN1Q15223 517 aa15.26■□□□□ 0.03
HDAC1-207ENST00000481281 MB21D2Q8IYB1 491 aaPredicted RBP15.26■□□□□ 0.03
HDAC1-207ENST00000481281 C11orf49Q9H6J7 331 aa15.26■□□□□ 0.03
HDAC1-207ENST00000481281 ANO2Q9NQ90 1003 aa15.26■□□□□ 0.03
HDAC1-207ENST00000481281 PNMA2Q9UL42 364 aa15.26■□□□□ 0.03
HDAC1-207ENST00000481281 SLC27A2O14975 620 aa15.25■□□□□ 0.03
HDAC1-207ENST00000481281 SNAI1O95863 264 aaPredicted RBP15.25■□□□□ 0.03
HDAC1-207ENST00000481281 PARP1P09874 1014 aaKnown RBP15.25■□□□□ 0.03
HDAC1-207ENST00000481281 ZNF865P0CJ78 1059 aaPredicted RBP15.25■□□□□ 0.03
HDAC1-207ENST00000481281 ANTXR2P58335 489 aa15.25■□□□□ 0.03
HDAC1-207ENST00000481281 CPVLQ9H3G5 476 aa15.25■□□□□ 0.03
HDAC1-207ENST00000481281 CYP39A1Q9NYL5 469 aa15.25■□□□□ 0.03
HDAC1-207ENST00000481281 CNPY2Q9Y2B0 182 aa15.25■□□□□ 0.03
HDAC1-207ENST00000481281 ASTN1O14525 1302 aa15.24■□□□□ 0.03
HDAC1-207ENST00000481281 POTEB2H3BUK9 544 aa15.24■□□□□ 0.03
HDAC1-207ENST00000481281 DNM1LO00429 736 aa15.24■□□□□ 0.03
HDAC1-207ENST00000481281 IFIT3O14879 490 aaKnown RBP15.24■□□□□ 0.03
HDAC1-207ENST00000481281 CNTN2Q02246 1040 aa15.24■□□□□ 0.03
HDAC1-207ENST00000481281 ERICH6BQ5W0A0 696 aa15.24■□□□□ 0.03
HDAC1-207ENST00000481281 CREB3L3Q68CJ9 461 aa15.24■□□□□ 0.03
HDAC1-207ENST00000481281 CASC1Q6TDU7 716 aa15.24■□□□□ 0.03
HDAC1-207ENST00000481281 CLEC4DQ8WXI8 215 aa15.24■□□□□ 0.03
HDAC1-207ENST00000481281 DPF3Q92784 378 aa15.24■□□□□ 0.03
HDAC1-207ENST00000481281 UBA5Q9GZZ9 404 aa15.24■□□□□ 0.03
HDAC1-207ENST00000481281 SENP2Q9HC62 589 aa15.24■□□□□ 0.03
HDAC1-207ENST00000481281 ERICH2A1L162 156 aa15.23■□□□□ 0.03
HDAC1-207ENST00000481281 SOWAHBA6NEL2 793 aa15.23■□□□□ 0.03
HDAC1-207ENST00000481281 NFIBO00712 420 aa15.23■□□□□ 0.03
HDAC1-207ENST00000481281 AKR1A1P14550 325 aa15.23■□□□□ 0.03
HDAC1-207ENST00000481281 WTAPQ15007 396 aa15.23■□□□□ 0.03
HDAC1-207ENST00000481281 SART3Q15020 963 aaKnown RBP15.23■□□□□ 0.03
HDAC1-207ENST00000481281 CDC37Q16543 378 aaPredicted RBP15.23■□□□□ 0.03
HDAC1-207ENST00000481281 ANO1Q5XXA6 986 aa15.23■□□□□ 0.03
HDAC1-207ENST00000481281 NSMFQ6X4W1 530 aa15.23■□□□□ 0.03
HDAC1-207ENST00000481281 ARMCX2Q7L311 632 aa15.23■□□□□ 0.03
HDAC1-207ENST00000481281 CHST3Q7LGC8 479 aa15.23■□□□□ 0.03
HDAC1-207ENST00000481281 ADGRF4Q8IZF3 695 aa15.23■□□□□ 0.03
HDAC1-207ENST00000481281 IGDCC4Q8TDY8 1250 aa15.23■□□□□ 0.03
HDAC1-207ENST00000481281 MTA3Q9BTC8 594 aa15.23■□□□□ 0.03
HDAC1-207ENST00000481281 KATNBL1Q9H079 304 aa15.23■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms