RNA–Protein interactions for RNA: ENST00000480468.1

SIK3-210, Transcript of SIK family kinase 3, humanhuman

TSL 1 (best)

Gene SIK3, Length 2,237 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIK3-210ENST00000480468 A0A087WZG4 1122 aa11.84□□□□□ -0.51
SIK3-210ENST00000480468 NUTM2BA6NNL0 878 aaPredicted RBP11.84□□□□□ -0.51
SIK3-210ENST00000480468 NUTM2EB1AL46 878 aaPredicted RBP11.84□□□□□ -0.51
SIK3-210ENST00000480468 EYA2O00167 538 aa11.84□□□□□ -0.51
SIK3-210ENST00000480468 TRAPPC3O43617 180 aa11.84□□□□□ -0.51
SIK3-210ENST00000480468 GTPBP6O43824 516 aaPredicted RBP11.84□□□□□ -0.51
SIK3-210ENST00000480468 DEXIO95424 95 aa11.84□□□□□ -0.51
SIK3-210ENST00000480468 A1BGP04217 495 aa11.84□□□□□ -0.51
SIK3-210ENST00000480468 DNM2P50570 870 aa11.84□□□□□ -0.51
SIK3-210ENST00000480468 CCNHP51946 323 aaPredicted RBP11.84□□□□□ -0.51
SIK3-210ENST00000480468 FOXO4P98177 505 aa11.84□□□□□ -0.51
SIK3-210ENST00000480468 SLC7A5Q01650 507 aa11.84□□□□□ -0.51
SIK3-210ENST00000480468 ADCY2Q08462 1091 aa11.84□□□□□ -0.51
SIK3-210ENST00000480468 BIRC2Q13490 618 aa11.84□□□□□ -0.51
SIK3-210ENST00000480468 NAA25Q14CX7 972 aa11.84□□□□□ -0.51
SIK3-210ENST00000480468 NFXL1Q6ZNB6 911 aa11.84□□□□□ -0.51
SIK3-210ENST00000480468 TTLL7Q6ZT98 887 aa11.84□□□□□ -0.51
SIK3-210ENST00000480468 LRP10Q7Z4F1 713 aa11.84□□□□□ -0.51
SIK3-210ENST00000480468 IRF2BP1Q8IU81 584 aa11.84□□□□□ -0.51
SIK3-210ENST00000480468 EIF1ADQ8N9N8 165 aaKnown RBP11.84□□□□□ -0.51
SIK3-210ENST00000480468 SYMPKQ92797 1274 aaKnown RBP11.84□□□□□ -0.51
SIK3-210ENST00000480468 IQCDQ96DY2 449 aa11.84□□□□□ -0.51
SIK3-210ENST00000480468 EPSTI1Q96J88 318 aa11.84□□□□□ -0.51
SIK3-210ENST00000480468 SCLT1Q96NL6 688 aa11.84□□□□□ -0.51
SIK3-210ENST00000480468 KDM4CQ9H3R0 1056 aa11.84□□□□□ -0.51
SIK3-210ENST00000480468 SH2D4AQ9H788 454 aa11.84□□□□□ -0.51
SIK3-210ENST00000480468 EBF2Q9HAK2 575 aa11.84□□□□□ -0.51
SIK3-210ENST00000480468 HOMER3Q9NSC5 361 aa11.84□□□□□ -0.51
SIK3-210ENST00000480468 SPATS2LQ9NUQ6 558 aaKnown RBP11.84□□□□□ -0.51
SIK3-210ENST00000480468 ATRNO75882 1429 aa11.84□□□□□ -0.51
SIK3-210ENST00000480468 LRP6O75581 1613 aa11.84□□□□□ -0.51
SIK3-210ENST00000480468 LAMB4A4D0S4 1761 aa11.84□□□□□ -0.51
SIK3-210ENST00000480468 SRGNP10124 158 aa11.84□□□□□ -0.51
SIK3-210ENST00000480468 INHBEP58166 350 aa11.84□□□□□ -0.51
SIK3-210ENST00000480468 RIPK1Q13546 671 aa11.84□□□□□ -0.51
SIK3-210ENST00000480468 FIGNQ5HY92 759 aa11.84□□□□□ -0.51
SIK3-210ENST00000480468 CCDC181Q5TID7 509 aa11.84□□□□□ -0.51
SIK3-210ENST00000480468 CCHCR1Q8TD31 782 aa11.84□□□□□ -0.51
SIK3-210ENST00000480468 ALS2CR12Q96Q35 445 aa11.84□□□□□ -0.51
SIK3-210ENST00000480468 PUS7LQ9H0K6 701 aaKnown RBP11.84□□□□□ -0.51
SIK3-210ENST00000480468 THAP9Q9H5L6 903 aa11.84□□□□□ -0.51
SIK3-210ENST00000480468 TMBIM4Q9HC24 238 aa11.84□□□□□ -0.51
SIK3-210ENST00000480468 SENP2Q9HC62 589 aa11.84□□□□□ -0.51
SIK3-210ENST00000480468 BSDC1Q9NW68 430 aaPredicted RBP11.84□□□□□ -0.51
SIK3-210ENST00000480468 TSKSQ9UJT2 592 aa11.84□□□□□ -0.51
SIK3-210ENST00000480468 KCNJ14Q9UNX9 436 aa11.84□□□□□ -0.51
SIK3-210ENST00000480468 SLC12A7Q9Y666 1083 aa11.84□□□□□ -0.51
SIK3-210ENST00000480468 XDHP47989 1333 aa11.84□□□□□ -0.51
SIK3-210ENST00000480468 ARHGAP23Q9P227 1491 aa11.84□□□□□ -0.51
SIK3-210ENST00000480468 SOS2Q07890 1332 aaPredicted RBP11.83□□□□□ -0.52
SIK3-210ENST00000480468 A0A1W2PQJ5 194 aa11.83□□□□□ -0.52
SIK3-210ENST00000480468 MACROD2A1Z1Q3 448 aa11.83□□□□□ -0.52
SIK3-210ENST00000480468 CASP1P29466 404 aa11.83□□□□□ -0.52
SIK3-210ENST00000480468 HSPA9P38646 679 aaKnown RBP11.83□□□□□ -0.52
SIK3-210ENST00000480468 RCAN1P53805 252 aa11.83□□□□□ -0.52
SIK3-210ENST00000480468 PPARAQ07869 468 aa11.83□□□□□ -0.52
SIK3-210ENST00000480468 SPA17Q15506 151 aa11.83□□□□□ -0.52
SIK3-210ENST00000480468 TMEM67Q5HYA8 995 aa11.83□□□□□ -0.52
SIK3-210ENST00000480468 CDCA2Q69YH5 1023 aaPredicted RBP11.83□□□□□ -0.52
SIK3-210ENST00000480468 NOC3LQ8WTT2 800 aaKnown RBP11.83□□□□□ -0.52
SIK3-210ENST00000480468 PLCB1Q9NQ66 1216 aa11.83□□□□□ -0.52
SIK3-210ENST00000480468 SLC12A6Q9UHW9 1150 aa11.83□□□□□ -0.52
SIK3-210ENST00000480468 ARFGEF2Q9Y6D5 1785 aa11.83□□□□□ -0.52
SIK3-210ENST00000480468 GOLGA6L10A6NI86 522 aa11.83□□□□□ -0.52
SIK3-210ENST00000480468 LCA5LO95447 670 aa11.83□□□□□ -0.52
SIK3-210ENST00000480468 GUCY1A2P33402 732 aa11.83□□□□□ -0.52
SIK3-210ENST00000480468 FKBP4Q02790 459 aaKnown RBP eCLIP11.83□□□□□ -0.52
SIK3-210ENST00000480468 CTDSPL2Q05D32 466 aa11.83□□□□□ -0.52
SIK3-210ENST00000480468 SEMA3FQ13275 785 aa11.83□□□□□ -0.52
SIK3-210ENST00000480468 NR5A1Q13285 461 aa11.83□□□□□ -0.52
SIK3-210ENST00000480468 BIRC3Q13489 604 aa11.83□□□□□ -0.52
SIK3-210ENST00000480468 CACNA2D3Q8IZS8 1091 aa11.83□□□□□ -0.52
SIK3-210ENST00000480468 ABTB2Q8N961 1025 aa11.83□□□□□ -0.52
SIK3-210ENST00000480468 CCDC47Q96A33 483 aaKnown RBP11.83□□□□□ -0.52
SIK3-210ENST00000480468 SEC16BQ96JE7 1060 aa11.83□□□□□ -0.52
SIK3-210ENST00000480468 DUSP10Q9Y6W6 482 aa11.83□□□□□ -0.52
SIK3-210ENST00000480468 MYH13Q9UKX3 1938 aa11.82□□□□□ -0.52
SIK3-210ENST00000480468 UBE2Q2LH0YL09 131 aa11.82□□□□□ -0.52
SIK3-210ENST00000480468 H7C1W4 665 aa11.82□□□□□ -0.52
SIK3-210ENST00000480468 ATP6V1G2O95670 118 aa11.82□□□□□ -0.52
SIK3-210ENST00000480468 MYL6BP14649 208 aa11.82□□□□□ -0.52
SIK3-210ENST00000480468 HNRNPH3P31942 346 aaKnown RBP11.82□□□□□ -0.52
SIK3-210ENST00000480468 E2F5Q15329 346 aa11.82□□□□□ -0.52
SIK3-210ENST00000480468 CDC37Q16543 378 aaPredicted RBP11.82□□□□□ -0.52
SIK3-210ENST00000480468 PDXDC2PQ6P474 469 aa11.82□□□□□ -0.52
SIK3-210ENST00000480468 DHX37Q8IY37 1157 aaKnown RBP11.82□□□□□ -0.52
SIK3-210ENST00000480468 CUL5Q93034 780 aa11.82□□□□□ -0.52
SIK3-210ENST00000480468 TATDN2Q93075 761 aa11.82□□□□□ -0.52
SIK3-210ENST00000480468 HINFPQ9BQA5 517 aa11.82□□□□□ -0.52
SIK3-210ENST00000480468 LEMD3Q9Y2U8 911 aa11.82□□□□□ -0.52
SIK3-210ENST00000480468 CAPN6Q9Y6Q1 641 aa11.82□□□□□ -0.52
SIK3-210ENST00000480468 UBR1Q8IWV7 1749 aa11.82□□□□□ -0.52
SIK3-210ENST00000480468 B4E1Z4 1266 aa11.82□□□□□ -0.52
SIK3-210ENST00000480468 GSTA1P08263 222 aa11.82□□□□□ -0.52
SIK3-210ENST00000480468 TRHP20396 242 aaPredicted RBP11.82□□□□□ -0.52
SIK3-210ENST00000480468 GCKP35557 465 aa11.82□□□□□ -0.52
SIK3-210ENST00000480468 CARSP49589 748 aaKnown RBP11.82□□□□□ -0.52
SIK3-210ENST00000480468 ELF3P78545 371 aaPredicted RBP11.82□□□□□ -0.52
SIK3-210ENST00000480468 SPRED3Q2MJR0 410 aa11.82□□□□□ -0.52
SIK3-210ENST00000480468 CFAP221Q4G0U5 840 aa11.82□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 49.3 ms