RNA–Protein interactions for RNA: ENST00000479300.1

VCP-205, Transcript of valosin containing protein, humanhuman

TSL 1 (best)

Gene VCP, Length 559 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCP-205ENST00000479300 PTGS1P23219 599 aa7.97□□□□□ -1.13
VCP-205ENST00000479300 ICA1Q05084 483 aa7.97□□□□□ -1.13
VCP-205ENST00000479300 TPRNQ4KMQ1 711 aa7.97□□□□□ -1.13
VCP-205ENST00000479300 ZNF365Q70YC5 407 aa7.97□□□□□ -1.13
VCP-205ENST00000479300 UHRF1Q96T88 793 aaPredicted RBP7.97□□□□□ -1.13
VCP-205ENST00000479300 ARMT1Q9H993 441 aa7.97□□□□□ -1.13
VCP-205ENST00000479300 STARD7Q9NQZ5 370 aa7.97□□□□□ -1.13
VCP-205ENST00000479300 SLC5A4Q9NY91 659 aa7.97□□□□□ -1.13
VCP-205ENST00000479300 THEGQ9P2T0 379 aa7.97□□□□□ -1.13
VCP-205ENST00000479300 DIS3Q9Y2L1 958 aaKnown RBP7.97□□□□□ -1.13
VCP-205ENST00000479300 ZNF532Q9HCE3 1301 aa7.97□□□□□ -1.13
VCP-205ENST00000479300 MCM3APO60318 1980 aa7.97□□□□□ -1.13
VCP-205ENST00000479300 TCF20Q9UGU0 1960 aaKnown RBP7.97□□□□□ -1.13
VCP-205ENST00000479300 CD4P01730 458 aa7.96□□□□□ -1.14
VCP-205ENST00000479300 BMP1P13497 986 aa7.96□□□□□ -1.14
VCP-205ENST00000479300 EEF2P13639 858 aaKnown RBP7.96□□□□□ -1.14
VCP-205ENST00000479300 MYOGP15173 224 aa7.96□□□□□ -1.14
VCP-205ENST00000479300 CST5P28325 142 aaPredicted RBP7.96□□□□□ -1.14
VCP-205ENST00000479300 CYP2C18P33260 490 aa7.96□□□□□ -1.14
VCP-205ENST00000479300 STAT3P40763 770 aa7.96□□□□□ -1.14
VCP-205ENST00000479300 CDK8P49336 464 aa7.96□□□□□ -1.14
VCP-205ENST00000479300 MRPS5P82675 430 aaKnown RBP7.96□□□□□ -1.14
VCP-205ENST00000479300 TFF2Q03403 129 aa7.96□□□□□ -1.14
VCP-205ENST00000479300 KCTD2Q14681 263 aa7.96□□□□□ -1.14
VCP-205ENST00000479300 LRRFIP1Q32MZ4 808 aaKnown RBP7.96□□□□□ -1.14
VCP-205ENST00000479300 GLIPR1L2Q4G1C9 344 aa7.96□□□□□ -1.14
VCP-205ENST00000479300 FAM83BQ5T0W9 1011 aa7.96□□□□□ -1.14
VCP-205ENST00000479300 MAMDC4Q6UXC1 1216 aa7.96□□□□□ -1.14
VCP-205ENST00000479300 FAM126BQ8IXS8 530 aa7.96□□□□□ -1.14
VCP-205ENST00000479300 NUP88Q99567 741 aaPredicted RBP7.96□□□□□ -1.14
VCP-205ENST00000479300 PPP1R12CQ9BZL4 782 aa7.96□□□□□ -1.14
VCP-205ENST00000479300 KATNBL1Q9H079 304 aa7.96□□□□□ -1.14
VCP-205ENST00000479300 UPF3AQ9H1J1 476 aaKnown RBP7.96□□□□□ -1.14
VCP-205ENST00000479300 NKX2-4Q9H2Z4 354 aa7.96□□□□□ -1.14
VCP-205ENST00000479300 PAG1Q9NWQ8 432 aa7.96□□□□□ -1.14
VCP-205ENST00000479300 PPP1R9AQ9ULJ8 1098 aa7.96□□□□□ -1.14
VCP-205ENST00000479300 ASTN1O14525 1302 aa7.96□□□□□ -1.14
VCP-205ENST00000479300 GRIN2DO15399 1336 aa7.96□□□□□ -1.14
VCP-205ENST00000479300 LRRC37A2A6NM11 1700 aa7.95□□□□□ -1.14
VCP-205ENST00000479300 MOXD2PA6NHM9 499 aa7.95□□□□□ -1.14
VCP-205ENST00000479300 RBAK-RBAKDNI3L0D1 243 aa7.95□□□□□ -1.14
VCP-205ENST00000479300 ARVCFO00192 962 aa7.95□□□□□ -1.14
VCP-205ENST00000479300 DUSP11O75319 330 aaKnown RBP7.95□□□□□ -1.14
VCP-205ENST00000479300 ASGR1P07306 291 aa7.95□□□□□ -1.14
VCP-205ENST00000479300 ATP5JP18859 108 aa7.95□□□□□ -1.14
VCP-205ENST00000479300 RABGGTBP53611 331 aa7.95□□□□□ -1.14
VCP-205ENST00000479300 PPIGQ13427 754 aaKnown RBP eCLIP7.95□□□□□ -1.141e-11■□□□□ 8.9
VCP-205ENST00000479300 C12orf60Q5U649 245 aa7.95□□□□□ -1.14
VCP-205ENST00000479300 CCDC129Q6ZRS4 1044 aa7.95□□□□□ -1.14
VCP-205ENST00000479300 NUP133Q8WUM0 1156 aa7.95□□□□□ -1.14
VCP-205ENST00000479300 HERVK_113Q902F9 699 aa7.95□□□□□ -1.14
VCP-205ENST00000479300 GAS2L1Q99501 681 aaPredicted RBP7.95□□□□□ -1.14
VCP-205ENST00000479300 BOLA2Q9H3K6 86 aa7.95□□□□□ -1.14
VCP-205ENST00000479300 ARHGEF10LQ9HCE6 1279 aa7.95□□□□□ -1.14
VCP-205ENST00000479300 SWAP70Q9UH65 585 aa7.95□□□□□ -1.14
VCP-205ENST00000479300 ZHX1Q9UKY1 873 aaPredicted RBP7.95□□□□□ -1.14
VCP-205ENST00000479300 FAM184BQ9ULE4 1060 aa7.95□□□□□ -1.14
VCP-205ENST00000479300 CNPY2Q9Y2B0 182 aa7.95□□□□□ -1.14
VCP-205ENST00000479300 DDX49Q9Y6V7 483 aaKnown RBP7.95□□□□□ -1.14
VCP-205ENST00000479300 ELP1O95163 1332 aa7.95□□□□□ -1.14
VCP-205ENST00000479300 SYNGAP1Q96PV0 1343 aa7.95□□□□□ -1.14
VCP-205ENST00000479300 C11orf97A0A1B0GVM6 126 aaPredicted RBP7.94□□□□□ -1.14
VCP-205ENST00000479300 EPOPA6NHQ4 379 aa7.94□□□□□ -1.14
VCP-205ENST00000479300 ARHGEF15O94989 841 aa7.94□□□□□ -1.14
VCP-205ENST00000479300 MBD4O95243 580 aa7.94□□□□□ -1.14
VCP-205ENST00000479300 C6orf222P0C671 652 aaPredicted RBP7.94□□□□□ -1.14
VCP-205ENST00000479300 IGFBP4P22692 258 aa7.94□□□□□ -1.14
VCP-205ENST00000479300 KCNQ1P51787 676 aa7.94□□□□□ -1.14
VCP-205ENST00000479300 GJA9P57773 515 aa7.94□□□□□ -1.14
VCP-205ENST00000479300 NKX3-2P78367 333 aa7.94□□□□□ -1.14
VCP-205ENST00000479300 BEX3Q00994 111 aa7.94□□□□□ -1.14
VCP-205ENST00000479300 ACVR2BQ13705 512 aa7.94□□□□□ -1.14
VCP-205ENST00000479300 CCDC144BQ3MJ40 725 aa7.94□□□□□ -1.14
VCP-205ENST00000479300 TMEM63BQ5T3F8 832 aa7.94□□□□□ -1.14
VCP-205ENST00000479300 C16orf86Q6ZW13 317 aa7.94□□□□□ -1.14
VCP-205ENST00000479300 SLC43A3Q8NBI5 491 aa7.94□□□□□ -1.14
VCP-205ENST00000479300 KHSRPQ92945 711 aaKnown RBP eCLIP7.94□□□□□ -1.14
VCP-205ENST00000479300 HAUS7Q99871 368 aa7.94□□□□□ -1.14
VCP-205ENST00000479300 WNT8AQ9H1J5 351 aa7.94□□□□□ -1.14
VCP-205ENST00000479300 SH2D4AQ9H788 454 aa7.94□□□□□ -1.14
VCP-205ENST00000479300 IL23AQ9NPF7 189 aa7.94□□□□□ -1.14
VCP-205ENST00000479300 ATP8A2Q9NTI2 1148 aa7.94□□□□□ -1.14
VCP-205ENST00000479300 CDKN2AIPQ9NXV6 580 aaPredicted RBP7.94□□□□□ -1.14
VCP-205ENST00000479300 STK24Q9Y6E0 443 aa7.94□□□□□ -1.14
VCP-205ENST00000479300 PRRC2BQ5JSZ5 2229 aaKnown RBP7.94□□□□□ -1.14
VCP-205ENST00000479300 MYH7P12883 1935 aa7.93□□□□□ -1.14
VCP-205ENST00000479300 A0A0U1RQG5 324 aaPredicted RBP7.93□□□□□ -1.14
VCP-205ENST00000479300 USP17L12C9JPN9 530 aa7.93□□□□□ -1.14
VCP-205ENST00000479300 USP17L21D6R901 530 aa7.93□□□□□ -1.14
VCP-205ENST00000479300 RFXAPO00287 272 aa7.93□□□□□ -1.14
VCP-205ENST00000479300 ADD2P35612 726 aa7.93□□□□□ -1.14
VCP-205ENST00000479300 C20orf194Q5TEA3 1177 aa7.93□□□□□ -1.14
VCP-205ENST00000479300 KRT40Q6A162 431 aa7.93□□□□□ -1.14
VCP-205ENST00000479300 SNRNP48Q6IEG0 339 aaKnown RBP7.93□□□□□ -1.14
VCP-205ENST00000479300 PSRC1Q6PGN9 363 aaPredicted RBP7.93□□□□□ -1.14
VCP-205ENST00000479300 DHX30Q7L2E3 1194 aaKnown RBP eCLIP7.93□□□□□ -1.14
VCP-205ENST00000479300 OTOP2Q7RTS6 562 aa7.93□□□□□ -1.14
VCP-205ENST00000479300 ZNF467Q7Z7K2 595 aaPredicted RBP7.93□□□□□ -1.14
VCP-205ENST00000479300 SIRT2Q8IXJ6 389 aa7.93□□□□□ -1.14
VCP-205ENST00000479300 TMEM199Q8N511 208 aa7.93□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms