RNA–Protein interactions for RNA: ENST00000479161.5

C9orf3-217, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 5

Gene C9orf3, Length 942 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-217ENST00000479161 EXOSC10Q01780 885 aaKnown RBP18.07■□□□□ 0.48
C9orf3-217ENST00000479161 KCTD2Q14681 263 aa18.07■□□□□ 0.48
C9orf3-217ENST00000479161 SAMD1Q6SPF0 538 aaPredicted RBP18.07■□□□□ 0.48
C9orf3-217ENST00000479161 CATIPQ7Z7H3 387 aa18.07■□□□□ 0.48
C9orf3-217ENST00000479161 DPP9Q86TI2 863 aa18.07■□□□□ 0.48
C9orf3-217ENST00000479161 SGMS1Q86VZ5 419 aa18.07■□□□□ 0.48
C9orf3-217ENST00000479161 RASEFQ8IZ41 740 aa18.07■□□□□ 0.48
C9orf3-217ENST00000479161 CPXCR1Q8N123 301 aa18.07■□□□□ 0.48
C9orf3-217ENST00000479161 TRIB2Q92519 343 aa18.07■□□□□ 0.48
C9orf3-217ENST00000479161 MMP19Q99542 508 aa18.07■□□□□ 0.48
C9orf3-217ENST00000479161 USP26Q9BXU7 913 aa18.07■□□□□ 0.48
C9orf3-217ENST00000479161 LY9Q9HBG7 655 aa18.07■□□□□ 0.48
C9orf3-217ENST00000479161 RAVER2Q9HCJ3 691 aaKnown RBP18.07■□□□□ 0.48
C9orf3-217ENST00000479161 RIPK3Q9Y572 518 aa18.07■□□□□ 0.48
C9orf3-217ENST00000479161 MYH6P13533 1939 aa18.07■□□□□ 0.48
C9orf3-217ENST00000479161 RPTORQ8N122 1335 aa18.06■□□□□ 0.48
C9orf3-217ENST00000479161 SH2B2O14492 632 aaPredicted RBP18.06■□□□□ 0.48
C9orf3-217ENST00000479161 DDAH1O94760 285 aa18.06■□□□□ 0.48
C9orf3-217ENST00000479161 INHAP05111 366 aa18.06■□□□□ 0.48
C9orf3-217ENST00000479161 ELNP15502 786 aa18.06■□□□□ 0.48
C9orf3-217ENST00000479161 GRM4Q14833 912 aa18.06■□□□□ 0.48
C9orf3-217ENST00000479161 RASGRP2Q7LDG7 609 aa18.06■□□□□ 0.48
C9orf3-217ENST00000479161 ZNF467Q7Z7K2 595 aaPredicted RBP18.06■□□□□ 0.48
C9orf3-217ENST00000479161 GPCPD1Q9NPB8 672 aa18.06■□□□□ 0.48
C9orf3-217ENST00000479161 PAK6Q9NQU5 681 aaPredicted RBP18.06■□□□□ 0.48
C9orf3-217ENST00000479161 NRBP1Q9UHY1 535 aa18.06■□□□□ 0.48
C9orf3-217ENST00000479161 ISY1Q9ULR0 285 aaKnown RBP18.06■□□□□ 0.48
C9orf3-217ENST00000479161 FRMPD2Q68DX3 1309 aaPredicted RBP18.05■□□□□ 0.48
C9orf3-217ENST00000479161 COBLO75128 1261 aa18.05■□□□□ 0.48
C9orf3-217ENST00000479161 CALM1P0DP23 149 aa18.05■□□□□ 0.48
C9orf3-217ENST00000479161 CALM2P0DP24 149 aa18.05■□□□□ 0.48
C9orf3-217ENST00000479161 CALM3P0DP25 149 aa18.05■□□□□ 0.48
C9orf3-217ENST00000479161 SLC16A2P36021 539 aa18.05■□□□□ 0.48
C9orf3-217ENST00000479161 ZNF792Q3KQV3 632 aa18.05■□□□□ 0.48
C9orf3-217ENST00000479161 MTMR8Q96EF0 704 aa18.05■□□□□ 0.48
C9orf3-217ENST00000479161 ACAD9Q9H845 621 aa18.05■□□□□ 0.48
C9orf3-217ENST00000479161 BIN2Q9UBW5 565 aaPredicted RBP18.05■□□□□ 0.48
C9orf3-217ENST00000479161 MAD2L2Q9UI95 211 aa18.05■□□□□ 0.48
C9orf3-217ENST00000479161 MTMR7Q9Y216 660 aa18.05■□□□□ 0.48
C9orf3-217ENST00000479161 PFASO15067 1338 aa18.04■□□□□ 0.48
C9orf3-217ENST00000479161 KLRF2D3W0D1 207 aa18.04■□□□□ 0.48
C9orf3-217ENST00000479161 CCL5P13501 91 aa18.04■□□□□ 0.48
C9orf3-217ENST00000479161 PSMA5P28066 241 aa18.04■□□□□ 0.48
C9orf3-217ENST00000479161 RCAN1P53805 252 aa18.04■□□□□ 0.48
C9orf3-217ENST00000479161 TRAF1Q13077 416 aa18.04■□□□□ 0.48
C9orf3-217ENST00000479161 MFSD14CQ5VZR4 134 aa18.04■□□□□ 0.48
C9orf3-217ENST00000479161 CHST3Q7LGC8 479 aa18.04■□□□□ 0.48
C9orf3-217ENST00000479161 ADGRF4Q8IZF3 695 aa18.04■□□□□ 0.48
C9orf3-217ENST00000479161 RGS22Q8NE09 1264 aa18.04■□□□□ 0.48
C9orf3-217ENST00000479161 NPLOC4Q8TAT6 608 aa18.04■□□□□ 0.48
C9orf3-217ENST00000479161 AGBL1Q96MI9 1066 aa18.04■□□□□ 0.48
C9orf3-217ENST00000479161 LZTS2Q9BRK4 669 aa18.04■□□□□ 0.48
C9orf3-217ENST00000479161 RIOX1Q9H6W3 641 aa18.04■□□□□ 0.48
C9orf3-217ENST00000479161 SNX14Q9Y5W7 946 aa18.04■□□□□ 0.48
C9orf3-217ENST00000479161 LOC102724159A0A0B4J2E5 919 aa18.03■□□□□ 0.48
C9orf3-217ENST00000479161 SLC34A2O95436 690 aa18.03■□□□□ 0.48
C9orf3-217ENST00000479161 KIF5BP33176 963 aa18.03■□□□□ 0.48
C9orf3-217ENST00000479161 GJA8P48165 433 aa18.03■□□□□ 0.48
C9orf3-217ENST00000479161 GNAQP50148 359 aa18.03■□□□□ 0.48
C9orf3-217ENST00000479161 PWP2Q15269 919 aaKnown RBP18.03■□□□□ 0.48
C9orf3-217ENST00000479161 ADCK5Q3MIX3 580 aa18.03■□□□□ 0.48
C9orf3-217ENST00000479161 MAMDC4Q6UXC1 1216 aa18.03■□□□□ 0.48
C9orf3-217ENST00000479161 ZNF654Q8IZM8 581 aa18.03■□□□□ 0.48
C9orf3-217ENST00000479161 IL17RAQ96F46 866 aa18.03■□□□□ 0.48
C9orf3-217ENST00000479161 DDX11Q96FC9 970 aa18.03■□□□□ 0.48
C9orf3-217ENST00000479161 MAML3Q96JK9 1138 aa18.03■□□□□ 0.48
C9orf3-217ENST00000479161 TRERF1Q96PN7 1200 aa18.03■□□□□ 0.48
C9orf3-217ENST00000479161 TM6SF1Q9BZW5 370 aa18.03■□□□□ 0.48
C9orf3-217ENST00000479161 HMX1Q9NP08 348 aaPredicted RBP18.03■□□□□ 0.48
C9orf3-217ENST00000479161 RNF146Q9NTX7 359 aa18.03■□□□□ 0.48
C9orf3-217ENST00000479161 CCPG1Q9ULG6 757 aa18.03■□□□□ 0.48
C9orf3-217ENST00000479161 BAZ2BQ9UIF8 2168 aaKnown RBP18.03■□□□□ 0.48
C9orf3-217ENST00000479161 GOLGA8HP0CJ92 632 aa18.02■□□□□ 0.48
C9orf3-217ENST00000479161 PPP2R5BQ15173 497 aa18.02■□□□□ 0.48
C9orf3-217ENST00000479161 MTFR1Q15390 333 aa18.02■□□□□ 0.48
C9orf3-217ENST00000479161 CCL14Q16627 93 aa18.02■□□□□ 0.48
C9orf3-217ENST00000479161 ANKRD35Q8N283 1001 aa18.02■□□□□ 0.48
C9orf3-217ENST00000479161 AGXT2Q9BYV1 514 aa18.02■□□□□ 0.48
C9orf3-217ENST00000479161 RNF208Q9H0X6 261 aa18.02■□□□□ 0.48
C9orf3-217ENST00000479161 JMJD4Q9H9V9 463 aa18.02■□□□□ 0.48
C9orf3-217ENST00000479161 SENP2Q9HC62 589 aa18.02■□□□□ 0.48
C9orf3-217ENST00000479161 SYNGAP1Q96PV0 1343 aa18.01■□□□□ 0.47
C9orf3-217ENST00000479161 CCDC69A6NI79 296 aa18.01■□□□□ 0.47
C9orf3-217ENST00000479161 MSCO60682 206 aa18.01■□□□□ 0.47
C9orf3-217ENST00000479161 ALAS1P13196 640 aa18.01■□□□□ 0.47
C9orf3-217ENST00000479161 PRKAR2AP13861 404 aaKnown RBP18.01■□□□□ 0.47
C9orf3-217ENST00000479161 ANAPC15P60006 121 aa18.01■□□□□ 0.47
C9orf3-217ENST00000479161 CACNB2Q08289 660 aaPredicted RBP18.01■□□□□ 0.47
C9orf3-217ENST00000479161 STAG2Q8N3U4 1231 aa18.01■□□□□ 0.47
C9orf3-217ENST00000479161 SAMD3Q8N6K7 520 aa18.01■□□□□ 0.47
C9orf3-217ENST00000479161 FAM133AQ8N9E0 248 aa18.01■□□□□ 0.47
C9orf3-217ENST00000479161 CTCFLQ8NI51 663 aaPredicted RBP18.01■□□□□ 0.47
C9orf3-217ENST00000479161 SPZ1Q9BXG8 430 aa18.01■□□□□ 0.47
C9orf3-217ENST00000479161 UBA5Q9GZZ9 404 aa18.01■□□□□ 0.47
C9orf3-217ENST00000479161 CRISPLD2Q9H0B8 497 aa18.01■□□□□ 0.47
C9orf3-217ENST00000479161 UNC93B1Q9H1C4 597 aa18.01■□□□□ 0.47
C9orf3-217ENST00000479161 A1CFQ9NQ94 594 aaKnown RBP18.01■□□□□ 0.47
C9orf3-217ENST00000479161 FLRT1Q9NZU1 646 aa18.01■□□□□ 0.47
C9orf3-217ENST00000479161 SGPL1O95470 568 aa18■□□□□ 0.47
C9orf3-217ENST00000479161 MLLT1Q03111 559 aaPredicted RBP18■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms