RNA–Protein interactions for RNA: ENST00000478582.5

CCM2-211, Transcript of CCM2 scaffold protein, humanhuman

TSL 3

Gene CCM2, Length 937 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-211ENST00000478582 SOCS4Q8WXH5 440 aa31.24■■■□□ 2.59
CCM2-211ENST00000478582 STAT3P40763 770 aa31.23■■■□□ 2.59
CCM2-211ENST00000478582 Q6ZUG5 572 aa31.23■■■□□ 2.59
CCM2-211ENST00000478582 RIOX2Q8IUF8 465 aa31.23■■■□□ 2.59
CCM2-211ENST00000478582 CTDP1Q9Y5B0 961 aaPredicted RBP31.23■■■□□ 2.59
CCM2-211ENST00000478582 SLC12A7Q9Y666 1083 aa31.23■■■□□ 2.59
CCM2-211ENST00000478582 SLC25A27O95847 323 aa31.22■■■□□ 2.59
CCM2-211ENST00000478582 CALM1P0DP23 149 aa31.22■■■□□ 2.59
CCM2-211ENST00000478582 CALM2P0DP24 149 aa31.22■■■□□ 2.59
CCM2-211ENST00000478582 CALM3P0DP25 149 aa31.22■■■□□ 2.59
CCM2-211ENST00000478582 PLS1Q14651 629 aa31.22■■■□□ 2.59
CCM2-211ENST00000478582 STAG2Q8N3U4 1231 aa31.22■■■□□ 2.59
CCM2-211ENST00000478582 TEX13BQ9BXU2 312 aa31.22■■■□□ 2.59
CCM2-211ENST00000478582 UNC93B1Q9H1C4 597 aa31.22■■■□□ 2.59
CCM2-211ENST00000478582 RANBP17Q9H2T7 1088 aaKnown RBP31.22■■■□□ 2.59
CCM2-211ENST00000478582 XRCC5P13010 732 aaKnown RBP31.21■■■□□ 2.59
CCM2-211ENST00000478582 CYP2B6P20813 491 aa31.21■■■□□ 2.59
CCM2-211ENST00000478582 MORN1Q5T089 497 aa31.21■■■□□ 2.59
CCM2-211ENST00000478582 USP6NLQ92738 828 aa31.21■■■□□ 2.59
CCM2-211ENST00000478582 UBA5Q9GZZ9 404 aa31.21■■■□□ 2.59
CCM2-211ENST00000478582 CWC22Q9HCG8 908 aaKnown RBP31.21■■■□□ 2.59
CCM2-211ENST00000478582 COL11A1P12107 1806 aaPredicted RBP31.2■■■□□ 2.59
CCM2-211ENST00000478582 KLRF2D3W0D1 207 aa31.2■■■□□ 2.59
CCM2-211ENST00000478582 HMGCRP04035 888 aa31.2■■■□□ 2.59
CCM2-211ENST00000478582 COPB2P35606 906 aa31.2■■■□□ 2.59
CCM2-211ENST00000478582 GJA8P48165 433 aa31.2■■■□□ 2.59
CCM2-211ENST00000478582 FGD1P98174 961 aa31.2■■■□□ 2.59
CCM2-211ENST00000478582 APOA5Q6Q788 366 aa31.2■■■□□ 2.59
CCM2-211ENST00000478582 SYNE3Q6ZMZ3 975 aa31.2■■■□□ 2.59
CCM2-211ENST00000478582 NUP133Q8WUM0 1156 aa31.2■■■□□ 2.59
CCM2-211ENST00000478582 MROH8Q9H579 483 aa31.2■■■□□ 2.59
CCM2-211ENST00000478582 BRPF3Q9ULD4 1205 aa31.2■■■□□ 2.59
CCM2-211ENST00000478582 ZNF536O15090 1300 aa31.2■■■□□ 2.58
CCM2-211ENST00000478582 RCAN1P53805 252 aa31.19■■■□□ 2.58
CCM2-211ENST00000478582 CTCFLQ8NI51 663 aaPredicted RBP31.19■■■□□ 2.58
CCM2-211ENST00000478582 MYL10Q9BUA6 226 aa31.19■■■□□ 2.58
CCM2-211ENST00000478582 UPF3BQ9BZI7 483 aaKnown RBP31.19■■■□□ 2.58
CCM2-211ENST00000478582 RAVER2Q9HCJ3 691 aaKnown RBP31.19■■■□□ 2.58
CCM2-211ENST00000478582 PDE4DIPQ5VU43 2346 aa31.19■■■□□ 2.58
CCM2-211ENST00000478582 BRCA2P51587 3418 aa31.18■■■□□ 2.58
CCM2-211ENST00000478582 ERCC3P19447 782 aa31.18■■■□□ 2.58
CCM2-211ENST00000478582 KIF5BP33176 963 aa31.18■■■□□ 2.58
CCM2-211ENST00000478582 RGS2P41220 211 aa31.18■■■□□ 2.58
CCM2-211ENST00000478582 SNRNP48Q6IEG0 339 aaKnown RBP31.18■■■□□ 2.58
CCM2-211ENST00000478582 ADGRF4Q8IZF3 695 aa31.18■■■□□ 2.58
CCM2-211ENST00000478582 CPXCR1Q8N123 301 aa31.18■■■□□ 2.58
CCM2-211ENST00000478582 BRF1Q92994 677 aa31.18■■■□□ 2.58
CCM2-211ENST00000478582 SHISA4Q96DD7 197 aa31.18■■■□□ 2.58
CCM2-211ENST00000478582 C22orf23Q9BZE7 217 aa31.18■■■□□ 2.58
CCM2-211ENST00000478582 CPVLQ9H3G5 476 aa31.18■■■□□ 2.58
CCM2-211ENST00000478582 PTPREP23469 700 aa31.17■■■□□ 2.58
CCM2-211ENST00000478582 RBM25P49756 843 aaKnown RBP31.17■■■□□ 2.58
CCM2-211ENST00000478582 EVCP57679 992 aa31.17■■■□□ 2.58
CCM2-211ENST00000478582 WDR78Q5VTH9 848 aa31.17■■■□□ 2.58
CCM2-211ENST00000478582 TRMT44Q8IYL2 757 aaKnown RBP31.17■■■□□ 2.58
CCM2-211ENST00000478582 FANCBQ8NB91 859 aa31.17■■■□□ 2.58
CCM2-211ENST00000478582 TRIB2Q92519 343 aa31.17■■■□□ 2.58
CCM2-211ENST00000478582 BACH2Q9BYV9 841 aa31.17■■■□□ 2.58
CCM2-211ENST00000478582 ALDH8A1Q9H2A2 487 aaPredicted RBP31.17■■■□□ 2.58
CCM2-211ENST00000478582 SLC15A5A6NIM6 579 aa31.16■■■□□ 2.58
CCM2-211ENST00000478582 STRNO43815 780 aa31.16■■■□□ 2.58
CCM2-211ENST00000478582 SMARCA1P28370 1054 aa31.16■■■□□ 2.58
CCM2-211ENST00000478582 MAP2K5Q13163 448 aa31.16■■■□□ 2.58
CCM2-211ENST00000478582 NCAPG2Q86XI2 1143 aa31.16■■■□□ 2.58
CCM2-211ENST00000478582 U2AF1L4Q8WU68 220 aaKnown RBP31.16■■■□□ 2.58
CCM2-211ENST00000478582 LZTS2Q9BRK4 669 aa31.16■■■□□ 2.58
CCM2-211ENST00000478582 RIOX1Q9H6W3 641 aa31.16■■■□□ 2.58
CCM2-211ENST00000478582 UPF2Q9HAU5 1272 aaKnown RBP31.16■■■□□ 2.58
CCM2-211ENST00000478582 PDRG1Q9NUG6 133 aa31.16■■■□□ 2.58
CCM2-211ENST00000478582 PNMA2Q9UL42 364 aa31.16■■■□□ 2.58
CCM2-211ENST00000478582 IVNS1ABPQ9Y6Y0 642 aa31.16■■■□□ 2.58
CCM2-211ENST00000478582 KLF18A0A0U1RQI7 1052 aa31.15■■■□□ 2.58
CCM2-211ENST00000478582 SGPL1O95470 568 aa31.15■■■□□ 2.58
CCM2-211ENST00000478582 ICAM1P05362 532 aa31.15■■■□□ 2.58
CCM2-211ENST00000478582 GNAQP50148 359 aa31.15■■■□□ 2.58
CCM2-211ENST00000478582 SNAP25P60880 206 aa31.15■■■□□ 2.58
CCM2-211ENST00000478582 TOB2Q14106 344 aaPredicted RBP31.15■■■□□ 2.58
CCM2-211ENST00000478582 MTMR8Q96EF0 704 aa31.15■■■□□ 2.58
CCM2-211ENST00000478582 JMJD4Q9H9V9 463 aa31.15■■■□□ 2.58
CCM2-211ENST00000478582 PAK6Q9NQU5 681 aaPredicted RBP31.15■■■□□ 2.58
CCM2-211ENST00000478582 RIPK3Q9Y572 518 aa31.15■■■□□ 2.58
CCM2-211ENST00000478582 ZBTB43O43298 467 aa31.14■■■□□ 2.58
CCM2-211ENST00000478582 CAPN2P17655 700 aa31.14■■■□□ 2.58
CCM2-211ENST00000478582 APOBRQ0VD83 1088 aa31.14■■■□□ 2.58
CCM2-211ENST00000478582 TKFCQ3LXA3 575 aa31.14■■■□□ 2.58
CCM2-211ENST00000478582 CCDC174Q6PII3 467 aa31.14■■■□□ 2.58
CCM2-211ENST00000478582 DHX30Q7L2E3 1194 aaKnown RBP eCLIP31.14■■■□□ 2.58
CCM2-211ENST00000478582 AGBL1Q96MI9 1066 aa31.14■■■□□ 2.58
CCM2-211ENST00000478582 APBA2Q99767 749 aa31.14■■■□□ 2.58
CCM2-211ENST00000478582 RXRAP19793 462 aa31.13■■■□□ 2.57
CCM2-211ENST00000478582 TRIM32Q13049 653 aa31.13■■■□□ 2.57
CCM2-211ENST00000478582 SLC35G1Q2M3R5 365 aa31.13■■■□□ 2.57
CCM2-211ENST00000478582 MICU3Q86XE3 530 aa31.13■■■□□ 2.57
CCM2-211ENST00000478582 ABRAQ8N0Z2 381 aa31.13■■■□□ 2.57
CCM2-211ENST00000478582 CHST13Q8NET6 341 aa31.13■■■□□ 2.57
CCM2-211ENST00000478582 DEFB118Q96PH6 123 aa31.13■■■□□ 2.57
CCM2-211ENST00000478582 RPTORQ8N122 1335 aa31.13■■■□□ 2.57
CCM2-211ENST00000478582 GRB14Q14449 540 aa31.12■■■□□ 2.57
CCM2-211ENST00000478582 PPP2R5BQ15173 497 aa31.12■■■□□ 2.57
CCM2-211ENST00000478582 SPZ1Q9BXG8 430 aa31.12■■■□□ 2.57
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms