RNA–Protein interactions for RNA: ENST00000478531.5

BRCA1-215, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 1,972 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-215ENST00000478531 ZNF654Q8IZM8 581 aa8.05□□□□□ -1.12
BRCA1-215ENST00000478531 STAG2Q8N3U4 1231 aa8.05□□□□□ -1.12
BRCA1-215ENST00000478531 SOCS4Q8WXH5 440 aa8.05□□□□□ -1.12
BRCA1-215ENST00000478531 TMEM87BQ96K49 555 aa8.05□□□□□ -1.12
BRCA1-215ENST00000478531 AGBL1Q96MI9 1066 aa8.05□□□□□ -1.12
BRCA1-215ENST00000478531 NAP1L2Q9ULW6 460 aaPredicted RBP8.05□□□□□ -1.12
BRCA1-215ENST00000478531 PLA2G6O60733 806 aa8.04□□□□□ -1.12
BRCA1-215ENST00000478531 SEC24BO95487 1268 aa8.04□□□□□ -1.12
BRCA1-215ENST00000478531 SLC25A27O95847 323 aa8.04□□□□□ -1.12
BRCA1-215ENST00000478531 ALAS1P13196 640 aa8.04□□□□□ -1.12
BRCA1-215ENST00000478531 ADORA2AP29274 412 aa8.04□□□□□ -1.12
BRCA1-215ENST00000478531 GRK4P32298 578 aa8.04□□□□□ -1.12
BRCA1-215ENST00000478531 RGS2P41220 211 aa8.04□□□□□ -1.12
BRCA1-215ENST00000478531 C8orf34Q49A92 452 aa8.04□□□□□ -1.12
BRCA1-215ENST00000478531 BLOC1S2Q6QNY1 142 aa8.04□□□□□ -1.12
BRCA1-215ENST00000478531 DHX32Q7L7V1 743 aaKnown RBP8.04□□□□□ -1.12
BRCA1-215ENST00000478531 MICU3Q86XE3 530 aa8.04□□□□□ -1.12
BRCA1-215ENST00000478531 RIOX2Q8IUF8 465 aa8.04□□□□□ -1.12
BRCA1-215ENST00000478531 SHCBP1Q8NEM2 672 aa8.04□□□□□ -1.12
BRCA1-215ENST00000478531 KCNB2Q92953 911 aa8.04□□□□□ -1.12
BRCA1-215ENST00000478531 MMP19Q99542 508 aa8.04□□□□□ -1.12
BRCA1-215ENST00000478531 MROH8Q9H579 483 aa8.04□□□□□ -1.12
BRCA1-215ENST00000478531 MAD2L2Q9UI95 211 aa8.04□□□□□ -1.12
BRCA1-215ENST00000478531 CCPG1Q9ULG6 757 aa8.04□□□□□ -1.12
BRCA1-215ENST00000478531 RIPK3Q9Y572 518 aa8.04□□□□□ -1.12
BRCA1-215ENST00000478531 LCTP09848 1927 aa8.04□□□□□ -1.12
BRCA1-215ENST00000478531 SLC15A5A6NIM6 579 aa8.04□□□□□ -1.12
BRCA1-215ENST00000478531 KLRF2D3W0D1 207 aa8.04□□□□□ -1.12
BRCA1-215ENST00000478531 PGK2P07205 417 aa8.04□□□□□ -1.12
BRCA1-215ENST00000478531 HMGB1P09429 215 aaKnown RBP8.04□□□□□ -1.12
BRCA1-215ENST00000478531 FDX1P10109 184 aa8.04□□□□□ -1.12
BRCA1-215ENST00000478531 FCER1AP12319 257 aa8.04□□□□□ -1.12
BRCA1-215ENST00000478531 PTPREP23469 700 aa8.04□□□□□ -1.12
BRCA1-215ENST00000478531 COPB2P35606 906 aa8.04□□□□□ -1.12
BRCA1-215ENST00000478531 OAZ1P54368 228 aa8.04□□□□□ -1.12
BRCA1-215ENST00000478531 PLCB2Q00722 1185 aa8.04□□□□□ -1.12
BRCA1-215ENST00000478531 GRB14Q14449 540 aa8.04□□□□□ -1.12
BRCA1-215ENST00000478531 GRM4Q14833 912 aa8.04□□□□□ -1.12
BRCA1-215ENST00000478531 CDC37Q16543 378 aaPredicted RBP8.04□□□□□ -1.12
BRCA1-215ENST00000478531 USH1GQ495M9 461 aa8.04□□□□□ -1.12
BRCA1-215ENST00000478531 MORN1Q5T089 497 aa8.04□□□□□ -1.12
BRCA1-215ENST00000478531 BTNL9Q6UXG8 535 aa8.04□□□□□ -1.12
BRCA1-215ENST00000478531 NBPF11Q86T75 865 aa8.04□□□□□ -1.12
BRCA1-215ENST00000478531 DPP9Q86TI2 863 aa8.04□□□□□ -1.12
BRCA1-215ENST00000478531 ADGRF4Q8IZF3 695 aa8.04□□□□□ -1.12
BRCA1-215ENST00000478531 SLAIN1Q8ND83 568 aa8.04□□□□□ -1.12
BRCA1-215ENST00000478531 APBA2Q99767 749 aa8.04□□□□□ -1.12
BRCA1-215ENST00000478531 RANBP17Q9H2T7 1088 aaKnown RBP8.04□□□□□ -1.12
BRCA1-215ENST00000478531 VAT1LQ9HCJ6 419 aa8.04□□□□□ -1.12
BRCA1-215ENST00000478531 RNF146Q9NTX7 359 aa8.04□□□□□ -1.12
BRCA1-215ENST00000478531 GJD2Q9UKL4 321 aa8.04□□□□□ -1.12
BRCA1-215ENST00000478531 SLC12A7Q9Y666 1083 aa8.04□□□□□ -1.12
BRCA1-215ENST00000478531 ZNF536O15090 1300 aa8.03□□□□□ -1.12
BRCA1-215ENST00000478531 WDR19Q8NEZ3 1342 aa8.03□□□□□ -1.12
BRCA1-215ENST00000478531 ATP2A1O14983 1001 aa8.03□□□□□ -1.12
BRCA1-215ENST00000478531 EPB41L2O43491 1005 aaKnown RBP8.03□□□□□ -1.12
BRCA1-215ENST00000478531 DDAH1O94760 285 aa8.03□□□□□ -1.12
BRCA1-215ENST00000478531 ICAM1P05362 532 aa8.03□□□□□ -1.12
BRCA1-215ENST00000478531 PSMA5P28066 241 aa8.03□□□□□ -1.12
BRCA1-215ENST00000478531 LIFRP42702 1097 aa8.03□□□□□ -1.12
BRCA1-215ENST00000478531 EXOSC10Q01780 885 aaKnown RBP8.03□□□□□ -1.12
BRCA1-215ENST00000478531 TROAPQ12815 778 aa8.03□□□□□ -1.12
BRCA1-215ENST00000478531 MAP2K5Q13163 448 aa8.03□□□□□ -1.12
BRCA1-215ENST00000478531 IRF5Q13568 498 aa8.03□□□□□ -1.12
BRCA1-215ENST00000478531 KCTD2Q14681 263 aa8.03□□□□□ -1.12
BRCA1-215ENST00000478531 CCL14Q16627 93 aa8.03□□□□□ -1.12
BRCA1-215ENST00000478531 Q6ZUG5 572 aa8.03□□□□□ -1.12
BRCA1-215ENST00000478531 HOMER1Q86YM7 354 aa8.03□□□□□ -1.12
BRCA1-215ENST00000478531 CTCFLQ8NI51 663 aaPredicted RBP8.03□□□□□ -1.12
BRCA1-215ENST00000478531 PIBF1Q8WXW3 757 aa8.03□□□□□ -1.12
BRCA1-215ENST00000478531 TRIB2Q92519 343 aa8.03□□□□□ -1.12
BRCA1-215ENST00000478531 MTA3Q9BTC8 594 aa8.03□□□□□ -1.12
BRCA1-215ENST00000478531 UPF3BQ9BZI7 483 aaKnown RBP8.03□□□□□ -1.12
BRCA1-215ENST00000478531 KLF18A0A0U1RQI7 1052 aa8.02□□□□□ -1.12
BRCA1-215ENST00000478531 STRNO43815 780 aa8.02□□□□□ -1.12
BRCA1-215ENST00000478531 HMGCRP04035 888 aa8.02□□□□□ -1.12
BRCA1-215ENST00000478531 INHAP05111 366 aa8.02□□□□□ -1.12
BRCA1-215ENST00000478531 RPS6KB1P23443 525 aa8.02□□□□□ -1.12
BRCA1-215ENST00000478531 SOX10P56693 466 aa8.02□□□□□ -1.12
BRCA1-215ENST00000478531 TRIM32Q13049 653 aa8.02□□□□□ -1.12
BRCA1-215ENST00000478531 SYNE3Q6ZMZ3 975 aa8.02□□□□□ -1.12
BRCA1-215ENST00000478531 ANKRD35Q8N283 1001 aa8.02□□□□□ -1.12
BRCA1-215ENST00000478531 TMTC2Q8N394 836 aa8.02□□□□□ -1.12
BRCA1-215ENST00000478531 USP6NLQ92738 828 aa8.02□□□□□ -1.12
BRCA1-215ENST00000478531 BRF1Q92994 677 aa8.02□□□□□ -1.12
BRCA1-215ENST00000478531 ZNF333Q96JL9 665 aa8.02□□□□□ -1.12
BRCA1-215ENST00000478531 TRERF1Q96PN7 1200 aa8.02□□□□□ -1.12
BRCA1-215ENST00000478531 ACAD9Q9H845 621 aa8.02□□□□□ -1.12
BRCA1-215ENST00000478531 FRMPD3Q5JV73 1810 aa8.02□□□□□ -1.12
BRCA1-215ENST00000478531 PALM3A6NDB9 673 aaPredicted RBP8.02□□□□□ -1.13
BRCA1-215ENST00000478531 GOLGA8BA8MQT2 603 aa8.02□□□□□ -1.13
BRCA1-215ENST00000478531 COBLO75128 1261 aa8.02□□□□□ -1.13
BRCA1-215ENST00000478531 PLEKHA8P1O95397 391 aa8.02□□□□□ -1.13
BRCA1-215ENST00000478531 KIF5BP33176 963 aa8.02□□□□□ -1.13
BRCA1-215ENST00000478531 UBXN2AP68543 259 aa8.02□□□□□ -1.13
BRCA1-215ENST00000478531 APOBRQ0VD83 1088 aa8.02□□□□□ -1.13
BRCA1-215ENST00000478531 MTFR1Q15390 333 aa8.02□□□□□ -1.13
BRCA1-215ENST00000478531 QRICH1Q2TAL8 776 aa8.02□□□□□ -1.13
BRCA1-215ENST00000478531 MUM1L1Q5H9M0 696 aa8.02□□□□□ -1.13
BRCA1-215ENST00000478531 APOA5Q6Q788 366 aa8.02□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms