RNA–Protein interactions for RNA: ENST00000478503.6

SH3D19-207, Transcript of SH3 domain containing 19, humanhuman

TSL 2

Gene SH3D19, Length 4,038 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3D19-207ENST00000478503 DNAI1Q9UI46 699 aa6.84□□□□□ -1.32
SH3D19-207ENST00000478503 RTCBQ9Y3I0 505 aaKnown RBP6.84□□□□□ -1.32
SH3D19-207ENST00000478503 CCDC196A0A1B0GTZ2 297 aa6.83□□□□□ -1.32
SH3D19-207ENST00000478503 PPP6R2O75170 966 aa6.83□□□□□ -1.32
SH3D19-207ENST00000478503 NCBP1Q09161 790 aaKnown RBP6.83□□□□□ -1.32
SH3D19-207ENST00000478503 TROAPQ12815 778 aa6.83□□□□□ -1.32
SH3D19-207ENST00000478503 CERKQ8TCT0 537 aa6.83□□□□□ -1.32
SH3D19-207ENST00000478503 WASF1Q92558 559 aa6.83□□□□□ -1.32
SH3D19-207ENST00000478503 IRF2BPLQ9H1B7 796 aa6.83□□□□□ -1.32
SH3D19-207ENST00000478503 ZNF219Q9P2Y4 722 aaPredicted RBP6.83□□□□□ -1.32
SH3D19-207ENST00000478503 PNPLA7Q6ZV29 1317 aa6.83□□□□□ -1.32
SH3D19-207ENST00000478503 SMTNL1A8MU46 457 aa6.83□□□□□ -1.32
SH3D19-207ENST00000478503 TEX33O43247 280 aa6.83□□□□□ -1.32
SH3D19-207ENST00000478503 PTPREP23469 700 aa6.83□□□□□ -1.32
SH3D19-207ENST00000478503 CCT6AP40227 531 aaKnown RBP6.83□□□□□ -1.32
SH3D19-207ENST00000478503 PLCD1P51178 756 aa6.83□□□□□ -1.32
SH3D19-207ENST00000478503 RBM6P78332 1123 aaKnown RBP6.83□□□□□ -1.32
SH3D19-207ENST00000478503 KCTD2Q14681 263 aa6.83□□□□□ -1.32
SH3D19-207ENST00000478503 KARSQ15046 597 aaKnown RBP6.83□□□□□ -1.32
SH3D19-207ENST00000478503 ELF2Q15723 593 aa6.83□□□□□ -1.32
SH3D19-207ENST00000478503 MAP9Q49MG5 647 aa6.83□□□□□ -1.32
SH3D19-207ENST00000478503 RILPL1Q5EBL4 403 aa6.83□□□□□ -1.32
SH3D19-207ENST00000478503 TTC39BQ5VTQ0 682 aaPredicted RBP6.83□□□□□ -1.32
SH3D19-207ENST00000478503 SMAP1Q8IYB5 467 aaPredicted RBP6.83□□□□□ -1.32
SH3D19-207ENST00000478503 SMARCC1Q92922 1105 aaPredicted RBP6.83□□□□□ -1.32
SH3D19-207ENST00000478503 MED15Q96RN5 788 aa6.83□□□□□ -1.32
SH3D19-207ENST00000478503 ITGB4P16144 1822 aa6.83□□□□□ -1.32
SH3D19-207ENST00000478503 A0A0U1RQJ8 604 aa6.83□□□□□ -1.32
SH3D19-207ENST00000478503 KRT2P35908 639 aa6.83□□□□□ -1.32
SH3D19-207ENST00000478503 MTF1Q14872 753 aa6.83□□□□□ -1.32
SH3D19-207ENST00000478503 SEPT2Q15019 361 aa6.83□□□□□ -1.32
SH3D19-207ENST00000478503 DNAJC21Q5F1R6 531 aaKnown RBP6.83□□□□□ -1.32
SH3D19-207ENST00000478503 HEATR3Q7Z4Q2 680 aa6.83□□□□□ -1.32
SH3D19-207ENST00000478503 IRX2Q9BZI1 471 aaPredicted RBP6.83□□□□□ -1.32
SH3D19-207ENST00000478503 CRNKL1Q9BZJ0 848 aaKnown RBP6.83□□□□□ -1.32
SH3D19-207ENST00000478503 INTS13Q9NVM9 706 aa6.83□□□□□ -1.32
SH3D19-207ENST00000478503 NUP98P52948 1817 aa6.83□□□□□ -1.32
SH3D19-207ENST00000478503 WDR19Q8NEZ3 1342 aa6.82□□□□□ -1.32
SH3D19-207ENST00000478503 CCP110O43303 1012 aa6.82□□□□□ -1.32
SH3D19-207ENST00000478503 ECEL1O95672 775 aa6.82□□□□□ -1.32
SH3D19-207ENST00000478503 CD44P16070 742 aaKnown RBP6.82□□□□□ -1.32
SH3D19-207ENST00000478503 PICALMQ13492 652 aa6.82□□□□□ -1.32
SH3D19-207ENST00000478503 MICALL1Q8N3F8 863 aa6.82□□□□□ -1.32
SH3D19-207ENST00000478503 OGFOD1Q8N543 542 aa6.82□□□□□ -1.32
SH3D19-207ENST00000478503 PPP1R13BQ96KQ4 1090 aa6.82□□□□□ -1.32
SH3D19-207ENST00000478503 MXD3Q9BW11 206 aa6.82□□□□□ -1.32
SH3D19-207ENST00000478503 RABGAP1Q9Y3P9 1069 aa6.82□□□□□ -1.32
SH3D19-207ENST00000478503 LRP6O75581 1613 aa6.82□□□□□ -1.32
SH3D19-207ENST00000478503 PLEKHG2Q9H7P9 1386 aa6.82□□□□□ -1.32
SH3D19-207ENST00000478503 EIF3JO75822 258 aaKnown RBP6.82□□□□□ -1.32
SH3D19-207ENST00000478503 IPO7O95373 1038 aaKnown RBP6.82□□□□□ -1.32
SH3D19-207ENST00000478503 XBP1P17861 261 aa6.82□□□□□ -1.32
SH3D19-207ENST00000478503 ATP2B2Q01814 1243 aa6.82□□□□□ -1.32
SH3D19-207ENST00000478503 SF3B3Q15393 1217 aaKnown RBP6.82□□□□□ -1.32
SH3D19-207ENST00000478503 ALKBH2Q6NS38 261 aa6.82□□□□□ -1.32
SH3D19-207ENST00000478503 TAX1BP1Q86VP1 789 aa6.82□□□□□ -1.32
SH3D19-207ENST00000478503 TUBE1Q9UJT0 475 aa6.82□□□□□ -1.32
SH3D19-207ENST00000478503 USP21Q9UK80 565 aa6.82□□□□□ -1.32
SH3D19-207ENST00000478503 GJA3Q9Y6H8 435 aa6.82□□□□□ -1.32
SH3D19-207ENST00000478503 C6orf229H3BNL8 230 aa6.82□□□□□ -1.32
SH3D19-207ENST00000478503 SLC26A4O43511 780 aa6.82□□□□□ -1.32
SH3D19-207ENST00000478503 KIF5CO60282 957 aa6.82□□□□□ -1.32
SH3D19-207ENST00000478503 CDC25BP30305 580 aa6.82□□□□□ -1.32
SH3D19-207ENST00000478503 ZNF131P52739 623 aa6.82□□□□□ -1.32
SH3D19-207ENST00000478503 E2F4Q16254 413 aa6.82□□□□□ -1.32
SH3D19-207ENST00000478503 ERCC6LQ2NKX8 1250 aa6.82□□□□□ -1.32
SH3D19-207ENST00000478503 TTC38Q5R3I4 469 aa6.82□□□□□ -1.32
SH3D19-207ENST00000478503 SMYD5Q6GMV2 418 aa6.82□□□□□ -1.32
SH3D19-207ENST00000478503 TYW1BQ6NUM6 668 aa6.82□□□□□ -1.32
SH3D19-207ENST00000478503 FBXO33Q7Z6M2 555 aa6.82□□□□□ -1.32
SH3D19-207ENST00000478503 PBXIP1Q96AQ6 731 aa6.82□□□□□ -1.32
SH3D19-207ENST00000478503 FOXP1Q9H334 677 aaPredicted RBP6.82□□□□□ -1.32
SH3D19-207ENST00000478503 KAT14Q9H8E8 782 aa6.82□□□□□ -1.32
SH3D19-207ENST00000478503 ABCC6O95255 1503 aa6.81□□□□□ -1.32
SH3D19-207ENST00000478503 URI1O94763 535 aaPredicted RBP6.81□□□□□ -1.32
SH3D19-207ENST00000478503 LDHBP07195 334 aaKnown RBP6.81□□□□□ -1.32
SH3D19-207ENST00000478503 PPM1FP49593 454 aaPredicted RBP6.81□□□□□ -1.32
SH3D19-207ENST00000478503 KANK3Q6NY19 840 aa6.81□□□□□ -1.32
SH3D19-207ENST00000478503 VMP1Q96GC9 406 aa6.81□□□□□ -1.32
SH3D19-207ENST00000478503 EIF4ENIF1Q9NRA8 985 aaKnown RBP6.81□□□□□ -1.32
SH3D19-207ENST00000478503 NARFQ9UHQ1 456 aa6.81□□□□□ -1.32
SH3D19-207ENST00000478503 FAM205AQ6ZU69 1335 aa6.81□□□□□ -1.32
SH3D19-207ENST00000478503 ATRNO75882 1429 aa6.81□□□□□ -1.32
SH3D19-207ENST00000478503 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP6.81□□□□□ -1.32
SH3D19-207ENST00000478503 PPP1R12AO14974 1030 aaPredicted RBP6.81□□□□□ -1.32
SH3D19-207ENST00000478503 UFL1O94874 794 aa6.81□□□□□ -1.32
SH3D19-207ENST00000478503 TFRCP02786 760 aaKnown RBP6.81□□□□□ -1.32
SH3D19-207ENST00000478503 PAX7P23759 505 aa6.81□□□□□ -1.32
SH3D19-207ENST00000478503 ABCD1P33897 745 aa6.81□□□□□ -1.32
SH3D19-207ENST00000478503 SCNN1AP37088 669 aa6.81□□□□□ -1.32
SH3D19-207ENST00000478503 MDM2Q00987 491 aaPredicted RBP6.81□□□□□ -1.32
SH3D19-207ENST00000478503 FUT2Q10981 343 aa6.81□□□□□ -1.32
SH3D19-207ENST00000478503 DPYDQ12882 1025 aa6.81□□□□□ -1.32
SH3D19-207ENST00000478503 TMTC3Q6ZXV5 915 aa6.81□□□□□ -1.32
SH3D19-207ENST00000478503 PNMA1Q8ND90 353 aa6.81□□□□□ -1.32
SH3D19-207ENST00000478503 KIF18AQ8NI77 898 aa6.81□□□□□ -1.32
SH3D19-207ENST00000478503 LZTFL1Q9NQ48 299 aa6.81□□□□□ -1.32
SH3D19-207ENST00000478503 IL17RBQ9NRM6 502 aa6.81□□□□□ -1.32
SH3D19-207ENST00000478503 ACTN4O43707 911 aaKnown RBP6.81□□□□□ -1.32
SH3D19-207ENST00000478503 KCNA2P16389 499 aa6.81□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms