RNA–Protein interactions for RNA: ENST00000478423.6

NPHP4-208, Transcript of nephrocystin 4, humanhuman

TSL 2

Gene NPHP4, Length 4,467 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-208ENST00000478423 ARHGAP27Q6ZUM4 889 aa15.75■□□□□ 0.11
NPHP4-208ENST00000478423 SMYD4Q8IYR2 804 aaPredicted RBP15.75■□□□□ 0.11
NPHP4-208ENST00000478423 STAG1Q8WVM7 1258 aa15.75■□□□□ 0.11
NPHP4-208ENST00000478423 GLG1Q92896 1179 aa15.75■□□□□ 0.11
NPHP4-208ENST00000478423 CD209Q9NNX6 404 aa15.75■□□□□ 0.11
NPHP4-208ENST00000478423 SMIM5Q71RC9 77 aa15.75■□□□□ 0.11
NPHP4-208ENST00000478423 LRRC8AQ8IWT6 810 aa15.75■□□□□ 0.11
NPHP4-208ENST00000478423 FAM178BQ8IXR5 827 aa15.75■□□□□ 0.11
NPHP4-208ENST00000478423 MYRIPQ8NFW9 859 aa15.75■□□□□ 0.11
NPHP4-208ENST00000478423 CCDC51Q96ER9 411 aa15.75■□□□□ 0.11
NPHP4-208ENST00000478423 CCDC77Q9BR77 488 aa15.75■□□□□ 0.11
NPHP4-208ENST00000478423 IFIH1Q9BYX4 1025 aaKnown RBP15.75■□□□□ 0.11
NPHP4-208ENST00000478423 PANK4Q9NVE7 773 aa15.75■□□□□ 0.11
NPHP4-208ENST00000478423 TRPC3Q13507 836 aa15.75■□□□□ 0.11
NPHP4-208ENST00000478423 ELF2Q15723 593 aa15.75■□□□□ 0.11
NPHP4-208ENST00000478423 ARHGAP44Q17R89 818 aa15.75■□□□□ 0.11
NPHP4-208ENST00000478423 ARHGEF16Q5VV41 709 aa15.75■□□□□ 0.11
NPHP4-208ENST00000478423 CCDC25Q86WR0 208 aa15.75■□□□□ 0.11
NPHP4-208ENST00000478423 NRBP1Q9UHY1 535 aa15.75■□□□□ 0.11
NPHP4-208ENST00000478423 CPDO75976 1380 aa15.75■□□□□ 0.11
NPHP4-208ENST00000478423 TERF1P54274 439 aa15.74■□□□□ 0.11
NPHP4-208ENST00000478423 UTP14CQ5TAP6 766 aaKnown RBP15.74■□□□□ 0.11
NPHP4-208ENST00000478423 MICALCLQ6ZW33 695 aa15.74■□□□□ 0.11
NPHP4-208ENST00000478423 DNAJC5Q9H3Z4 198 aa15.74■□□□□ 0.11
NPHP4-208ENST00000478423 LAD1O00515 517 aa15.74■□□□□ 0.11
NPHP4-208ENST00000478423 COBLO75128 1261 aa15.74■□□□□ 0.11
NPHP4-208ENST00000478423 CYB5R4Q7L1T6 521 aa15.74■□□□□ 0.11
NPHP4-208ENST00000478423 SH3RF3Q8TEJ3 882 aaPredicted RBP15.74■□□□□ 0.11
NPHP4-208ENST00000478423 OVOS2A0A0G2JMS6 1433 aa15.74■□□□□ 0.11
NPHP4-208ENST00000478423 ATP2A1O14983 1001 aa15.74■□□□□ 0.11
NPHP4-208ENST00000478423 KIF2CQ99661 725 aa15.74■□□□□ 0.11
NPHP4-208ENST00000478423 COL4A3BPQ9Y5P4 624 aa15.74■□□□□ 0.11
NPHP4-208ENST00000478423 NEDD4P46934 1319 aa15.74■□□□□ 0.11
NPHP4-208ENST00000478423 A0A1W2PRG0 241 aa15.74■□□□□ 0.11
NPHP4-208ENST00000478423 GNA14O95837 355 aa15.74■□□□□ 0.11
NPHP4-208ENST00000478423 BMP3P12645 472 aa15.74■□□□□ 0.11
NPHP4-208ENST00000478423 ERCC5P28715 1186 aaPredicted RBP15.74■□□□□ 0.11
NPHP4-208ENST00000478423 CACNB3P54284 484 aa15.74■□□□□ 0.11
NPHP4-208ENST00000478423 EAPPQ56P03 285 aaPredicted RBP15.74■□□□□ 0.11
NPHP4-208ENST00000478423 ATRIPQ8WXE1 791 aa15.74■□□□□ 0.11
NPHP4-208ENST00000478423 DDX12PQ92771 950 aa15.74■□□□□ 0.11
NPHP4-208ENST00000478423 CTTNBP2NLQ9P2B4 639 aa15.74■□□□□ 0.11
NPHP4-208ENST00000478423 UBXN2AP68543 259 aa15.73■□□□□ 0.11
NPHP4-208ENST00000478423 CALCOCO2Q13137 446 aa15.73■□□□□ 0.11
NPHP4-208ENST00000478423 PABPC4Q13310 644 aaKnown RBP eCLIP15.73■□□□□ 0.11
NPHP4-208ENST00000478423 TUBB2AQ13885 445 aa15.73■□□□□ 0.11
NPHP4-208ENST00000478423 DNAJC21Q5F1R6 531 aaKnown RBP15.73■□□□□ 0.11
NPHP4-208ENST00000478423 C8orf74Q6P047 294 aa15.73■□□□□ 0.11
NPHP4-208ENST00000478423 LARP4BQ92615 738 aaKnown RBP15.73■□□□□ 0.11
NPHP4-208ENST00000478423 TUBB2BQ9BVA1 445 aa15.73■□□□□ 0.11
NPHP4-208ENST00000478423 NUCKS1Q9H1E3 243 aaKnown RBP15.73■□□□□ 0.11
NPHP4-208ENST00000478423 DCP1AQ9NPI6 582 aaPredicted RBP15.73■□□□□ 0.11
NPHP4-208ENST00000478423 BCRP11274 1271 aa15.73■□□□□ 0.11
NPHP4-208ENST00000478423 ADRA2BP18089 450 aa15.73■□□□□ 0.11
NPHP4-208ENST00000478423 PPP1R7Q15435 360 aa15.73■□□□□ 0.11
NPHP4-208ENST00000478423 BRDTQ58F21 947 aaPredicted RBP15.73■□□□□ 0.11
NPHP4-208ENST00000478423 XKR9Q5GH70 373 aa15.73■□□□□ 0.11
NPHP4-208ENST00000478423 CFAP58Q5T655 872 aa15.73■□□□□ 0.11
NPHP4-208ENST00000478423 OTUD6AQ7L8S5 288 aa15.73■□□□□ 0.11
NPHP4-208ENST00000478423 ANKRD35Q8N283 1001 aa15.73■□□□□ 0.11
NPHP4-208ENST00000478423 MASTLQ96GX5 879 aa15.73■□□□□ 0.11
NPHP4-208ENST00000478423 ETF1P62495 437 aaKnown RBP15.73■□□□□ 0.11
NPHP4-208ENST00000478423 SEL1L2Q5TEA6 688 aa15.73■□□□□ 0.11
NPHP4-208ENST00000478423 MCF2L2Q86YR7 1114 aa15.73■□□□□ 0.11
NPHP4-208ENST00000478423 MB21D2Q8IYB1 491 aaPredicted RBP15.73■□□□□ 0.11
NPHP4-208ENST00000478423 SLC44A5Q8NCS7 719 aa15.73■□□□□ 0.11
NPHP4-208ENST00000478423 EPSTI1Q96J88 318 aa15.73■□□□□ 0.11
NPHP4-208ENST00000478423 AK8Q96MA6 479 aa15.73■□□□□ 0.11
NPHP4-208ENST00000478423 IWS1Q96ST2 819 aa15.73■□□□□ 0.11
NPHP4-208ENST00000478423 CHGBP05060 677 aa15.72■□□□□ 0.11
NPHP4-208ENST00000478423 CCDC93Q567U6 631 aa15.72■□□□□ 0.11
NPHP4-208ENST00000478423 SULF1Q8IWU6 871 aa15.72■□□□□ 0.11
NPHP4-208ENST00000478423 GJA10Q969M2 543 aa15.72■□□□□ 0.11
NPHP4-208ENST00000478423 MTRF1LQ9UGC7 380 aaKnown RBP15.72■□□□□ 0.11
NPHP4-208ENST00000478423 SRPRBQ9Y5M8 271 aaKnown RBP15.72■□□□□ 0.11
NPHP4-208ENST00000478423 GSG1L2A8MUP6 293 aa15.72■□□□□ 0.11
NPHP4-208ENST00000478423 ZNF500O60304 480 aaPredicted RBP15.72■□□□□ 0.11
NPHP4-208ENST00000478423 FAM84BQ96KN1 310 aaPredicted RBP15.72■□□□□ 0.11
NPHP4-208ENST00000478423 SMIM23A6NLE4 172 aa15.72■□□□□ 0.11
NPHP4-208ENST00000478423 CAPN2P17655 700 aa15.72■□□□□ 0.11
NPHP4-208ENST00000478423 STAT1P42224 750 aa15.72■□□□□ 0.11
NPHP4-208ENST00000478423 ADAM9Q13443 819 aa15.72■□□□□ 0.11
NPHP4-208ENST00000478423 NFIXQ14938 502 aa15.72■□□□□ 0.11
NPHP4-208ENST00000478423 LSM14BQ9BX40 385 aaKnown RBP15.72■□□□□ 0.11
NPHP4-208ENST00000478423 CUEDC2Q9H467 287 aa15.72■□□□□ 0.11
NPHP4-208ENST00000478423 SBDSQ9Y3A5 250 aaKnown RBP eCLIP15.72■□□□□ 0.11
NPHP4-208ENST00000478423 ADGRB1O14514 1584 aa15.72■□□□□ 0.11
NPHP4-208ENST00000478423 RFX7Q2KHR2 1363 aa15.72■□□□□ 0.11
NPHP4-208ENST00000478423 FAM170AA1A519 330 aa15.72■□□□□ 0.11
NPHP4-208ENST00000478423 CEP104O60308 925 aa15.72■□□□□ 0.11
NPHP4-208ENST00000478423 TNNI1P19237 187 aa15.72■□□□□ 0.11
NPHP4-208ENST00000478423 TMTC3Q6ZXV5 915 aa15.72■□□□□ 0.11
NPHP4-208ENST00000478423 CCDC26Q8TAB7 109 aa15.72■□□□□ 0.11
NPHP4-208ENST00000478423 GJD4Q96KN9 370 aaPredicted RBP15.72■□□□□ 0.11
NPHP4-208ENST00000478423 TEKT3Q9BXF9 490 aa15.72■□□□□ 0.11
NPHP4-208ENST00000478423 VPS18Q9P253 973 aa15.72■□□□□ 0.11
NPHP4-208ENST00000478423 NRXN1Q9ULB1 1477 aa15.72■□□□□ 0.11
NPHP4-208ENST00000478423 LRCH2Q5VUJ6 765 aa15.71■□□□□ 0.11
NPHP4-208ENST00000478423 DPY19L2Q6NUT2 758 aa15.71■□□□□ 0.11
NPHP4-208ENST00000478423 KRT26Q7Z3Y9 468 aa15.71■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms