RNA–Protein interactions for RNA: ENST00000478063.2

LMNA-214, Transcript of lamin A/C, humanhuman

TSL 5

Gene LMNA, Length 285 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNA-214ENST00000478063 BRMS1Q9HCU9 246 aa15.34■□□□□ 0.05
LMNA-214ENST00000478063 PPP1R9AQ9ULJ8 1098 aa15.34■□□□□ 0.05
LMNA-214ENST00000478063 CALML3P27482 149 aa15.33■□□□□ 0.04
LMNA-214ENST00000478063 KRT2P35908 639 aa15.33■□□□□ 0.04
LMNA-214ENST00000478063 KIF23Q02241 960 aaPredicted RBP15.33■□□□□ 0.04
LMNA-214ENST00000478063 MKRN3Q13064 507 aaKnown RBP15.33■□□□□ 0.04
LMNA-214ENST00000478063 FOXD4L6Q3SYB3 417 aaPredicted RBP15.33■□□□□ 0.04
LMNA-214ENST00000478063 TREML2Q5T2D2 321 aa15.33■□□□□ 0.04
LMNA-214ENST00000478063 TYW1BQ6NUM6 668 aa15.33■□□□□ 0.04
LMNA-214ENST00000478063 CCDC174Q6PII3 467 aa15.33■□□□□ 0.04
LMNA-214ENST00000478063 FOXD4L3Q6VB84 417 aaPredicted RBP15.33■□□□□ 0.04
LMNA-214ENST00000478063 FBXO11Q86XK2 927 aa15.33■□□□□ 0.04
LMNA-214ENST00000478063 DIS3L2Q8IYB7 885 aaKnown RBP15.33■□□□□ 0.04
LMNA-214ENST00000478063 FAM177A1Q8N128 213 aaPredicted RBP15.33■□□□□ 0.04
LMNA-214ENST00000478063 ZNF784Q8NCA9 323 aaPredicted RBP15.33■□□□□ 0.04
LMNA-214ENST00000478063 AMNQ9BXJ7 453 aa15.33■□□□□ 0.04
LMNA-214ENST00000478063 RANBP17Q9H2T7 1088 aaKnown RBP15.33■□□□□ 0.04
LMNA-214ENST00000478063 ZSCAN16Q9H4T2 348 aaPredicted RBP15.33■□□□□ 0.04
LMNA-214ENST00000478063 CTDP1Q9Y5B0 961 aaPredicted RBP15.33■□□□□ 0.04
LMNA-214ENST00000478063 ATP6V1DQ9Y5K8 247 aa15.33■□□□□ 0.04
LMNA-214ENST00000478063 KIF28PB7ZC32 967 aa15.32■□□□□ 0.04
LMNA-214ENST00000478063 USH1GQ495M9 461 aa15.32■□□□□ 0.04
LMNA-214ENST00000478063 PPP1R18Q6NYC8 613 aa15.32■□□□□ 0.04
LMNA-214ENST00000478063 CATSPERGQ6ZRH7 1159 aa15.32■□□□□ 0.04
LMNA-214ENST00000478063 FASTKD5Q7L8L6 764 aaKnown RBP15.32■□□□□ 0.04
LMNA-214ENST00000478063 AGTPBP1Q9UPW5 1226 aa15.32■□□□□ 0.04
LMNA-214ENST00000478063 PCDHA1Q9Y5I3 950 aa15.32■□□□□ 0.04
LMNA-214ENST00000478063 SMCO2A6NFE2 343 aa15.31■□□□□ 0.04
LMNA-214ENST00000478063 BTBD18B2RXH4 712 aa15.31■□□□□ 0.04
LMNA-214ENST00000478063 ZBED4O75132 1171 aa15.31■□□□□ 0.04
LMNA-214ENST00000478063 ZBTB48P10074 688 aaPredicted RBP15.31■□□□□ 0.04
LMNA-214ENST00000478063 DSG3P32926 999 aa15.31■□□□□ 0.04
LMNA-214ENST00000478063 TRAF1Q13077 416 aa15.31■□□□□ 0.04
LMNA-214ENST00000478063 COG2Q14746 738 aa15.31■□□□□ 0.04
LMNA-214ENST00000478063 SPRYD7Q5W111 196 aa15.31■□□□□ 0.04
LMNA-214ENST00000478063 SAPCD2Q86UD0 394 aa15.31■□□□□ 0.04
LMNA-214ENST00000478063 OXER1Q8TDS5 423 aa15.31■□□□□ 0.04
LMNA-214ENST00000478063 ATG4CQ96DT6 458 aa15.31■□□□□ 0.04
LMNA-214ENST00000478063 GBP4Q96PP9 640 aa15.31■□□□□ 0.04
LMNA-214ENST00000478063 FOXP1Q9H334 677 aaPredicted RBP15.31■□□□□ 0.04
LMNA-214ENST00000478063 C6orf50Q9HD87 102 aa15.31■□□□□ 0.04
LMNA-214ENST00000478063 CCL15-CCL14A0A0B4J2E2 113 aa15.3■□□□□ 0.04
LMNA-214ENST00000478063 ESYT2A0FGR8 921 aa15.3■□□□□ 0.04
LMNA-214ENST00000478063 FDX1P10109 184 aa15.3■□□□□ 0.04
LMNA-214ENST00000478063 CETPP11597 493 aa15.3■□□□□ 0.04
LMNA-214ENST00000478063 TAL1P17542 331 aaPredicted RBP15.3■□□□□ 0.04
LMNA-214ENST00000478063 ZNF157P51786 506 aaPredicted RBP15.3■□□□□ 0.04
LMNA-214ENST00000478063 ADCY7P51828 1080 aa15.3■□□□□ 0.04
LMNA-214ENST00000478063 GTF2A2P52657 109 aa15.3■□□□□ 0.04
LMNA-214ENST00000478063 IRX3P78415 501 aaPredicted RBP15.3■□□□□ 0.04
LMNA-214ENST00000478063 FSTL1Q12841 308 aa15.3■□□□□ 0.04
LMNA-214ENST00000478063 NR5A1Q13285 461 aa15.3■□□□□ 0.04
LMNA-214ENST00000478063 PABPC4Q13310 644 aaKnown RBP eCLIP15.3■□□□□ 0.04
LMNA-214ENST00000478063 MOGSQ13724 837 aa15.3■□□□□ 0.04
LMNA-214ENST00000478063 NPY5RQ15761 445 aa15.3■□□□□ 0.04
LMNA-214ENST00000478063 CCL15Q16663 113 aa15.3■□□□□ 0.04
LMNA-214ENST00000478063 GALNT17Q6IS24 598 aa15.3■□□□□ 0.04
LMNA-214ENST00000478063 RGMBQ6NW40 437 aa15.3■□□□□ 0.04
LMNA-214ENST00000478063 FAM173BQ6P4H8 233 aa15.3■□□□□ 0.04
LMNA-214ENST00000478063 BRAPQ7Z569 592 aa15.3■□□□□ 0.04
LMNA-214ENST00000478063 MYPNQ86TC9 1320 aa15.3■□□□□ 0.04
LMNA-214ENST00000478063 BLIDQ8IZY5 108 aa15.3■□□□□ 0.04
LMNA-214ENST00000478063 ZMYND12Q9H0C1 365 aa15.3■□□□□ 0.04
LMNA-214ENST00000478063 SLC38A10Q9HBR0 1119 aa15.3■□□□□ 0.04
LMNA-214ENST00000478063 ABT1Q9ULW3 272 aaKnown RBP15.3■□□□□ 0.04
LMNA-214ENST00000478063 PCDHA4Q9UN74 947 aa15.3■□□□□ 0.04
LMNA-214ENST00000478063 TLL2Q9Y6L7 1015 aa15.3■□□□□ 0.04
LMNA-214ENST00000478063 ZNFX1Q9P2E3 1918 aaKnown RBP15.29■□□□□ 0.04
LMNA-214ENST00000478063 TMEM88BA6NKF7 163 aa15.29■□□□□ 0.04
LMNA-214ENST00000478063 SPDYE16A6NNV3 312 aaPredicted RBP15.29■□□□□ 0.04
LMNA-214ENST00000478063 VWA5AO00534 786 aa15.29■□□□□ 0.04
LMNA-214ENST00000478063 BAG4O95429 457 aaKnown RBP15.29■□□□□ 0.04
LMNA-214ENST00000478063 ICAM1P05362 532 aa15.29■□□□□ 0.04
LMNA-214ENST00000478063 NCLP19338 710 aaKnown RBP15.29■□□□□ 0.04
LMNA-214ENST00000478063 U2AF2P26368 475 aaKnown RBP eCLIP15.29■□□□□ 0.04
LMNA-214ENST00000478063 GNA11P29992 359 aa15.29■□□□□ 0.04
LMNA-214ENST00000478063 HOXA7P31268 230 aaPredicted RBP15.29■□□□□ 0.04
LMNA-214ENST00000478063 RASAL3Q86YV0 1011 aa15.29■□□□□ 0.04
LMNA-214ENST00000478063 NOSTRINQ8IVI9 506 aa15.29■□□□□ 0.04
LMNA-214ENST00000478063 CPXCR1Q8N123 301 aa15.29■□□□□ 0.04
LMNA-214ENST00000478063 DAGLBQ8NCG7 672 aa15.29■□□□□ 0.04
LMNA-214ENST00000478063 BICD2Q8TD16 824 aa15.29■□□□□ 0.04
LMNA-214ENST00000478063 CHAMP1Q96JM3 812 aa15.29■□□□□ 0.04
LMNA-214ENST00000478063 RAVER2Q9HCJ3 691 aaKnown RBP15.29■□□□□ 0.04
LMNA-214ENST00000478063 CCPG1Q9ULG6 757 aa15.29■□□□□ 0.04
LMNA-214ENST00000478063 ZNF536O15090 1300 aa15.28■□□□□ 0.04
LMNA-214ENST00000478063 ABCB11O95342 1321 aa15.28■□□□□ 0.04
LMNA-214ENST00000478063 GPAT2Q6NUI2 795 aa15.28■□□□□ 0.04
LMNA-214ENST00000478063 CUL5Q93034 780 aa15.28■□□□□ 0.04
LMNA-214ENST00000478063 MS4A4AQ96JQ5 239 aa15.28■□□□□ 0.04
LMNA-214ENST00000478063 AGBL1Q96MI9 1066 aa15.28■□□□□ 0.04
LMNA-214ENST00000478063 ASCC2Q9H1I8 757 aaPredicted RBP15.28■□□□□ 0.04
LMNA-214ENST00000478063 HOXC10Q9NYD6 342 aa15.28■□□□□ 0.04
LMNA-214ENST00000478063 ADAMTS3O15072 1205 aa15.27■□□□□ 0.04
LMNA-214ENST00000478063 OSBPP22059 807 aa15.27■□□□□ 0.04
LMNA-214ENST00000478063 MRPL12P52815 198 aaKnown RBP15.27■□□□□ 0.04
LMNA-214ENST00000478063 DNM1Q05193 864 aaKnown RBP15.27■□□□□ 0.04
LMNA-214ENST00000478063 MYSM1Q5VVJ2 828 aa15.27■□□□□ 0.04
LMNA-214ENST00000478063 REXO1Q8N1G1 1221 aaKnown RBP15.27■□□□□ 0.04
LMNA-214ENST00000478063 RASGRP4Q8TDF6 673 aa15.27■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 100.7 ms