RNA–Protein interactions for RNA: ENST00000477702.1

LINC00173-202, long intergenic non-protein coding RNA 173, humanhuman

TSL 3

Gene LINC00173, Length 314 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00173-202ENST00000477702 DOCK3Q8IZD9 2030 aa7.79□□□□□ -1.16
LINC00173-202ENST00000477702 ZBTB39O15060 712 aa7.79□□□□□ -1.16
LINC00173-202ENST00000477702 PLIN1O60240 522 aa7.79□□□□□ -1.16
LINC00173-202ENST00000477702 IGKV5-2P06315 115 aa7.79□□□□□ -1.16
LINC00173-202ENST00000477702 HOXB7P09629 217 aa7.79□□□□□ -1.16
LINC00173-202ENST00000477702 TMPOP42166 694 aaKnown RBP7.79□□□□□ -1.16
LINC00173-202ENST00000477702 CWF19L2Q2TBE0 894 aaKnown RBP7.79□□□□□ -1.16
LINC00173-202ENST00000477702 C15orf52Q6ZUT6 534 aaKnown RBP7.79□□□□□ -1.16
LINC00173-202ENST00000477702 KCTD17Q8N5Z5 321 aa7.79□□□□□ -1.16
LINC00173-202ENST00000477702 ANKRD13CQ8N6S4 541 aa7.79□□□□□ -1.16
LINC00173-202ENST00000477702 SMCR8Q8TEV9 937 aaPredicted RBP7.79□□□□□ -1.16
LINC00173-202ENST00000477702 SUSD3Q96L08 255 aa7.79□□□□□ -1.16
LINC00173-202ENST00000477702 GNEQ9Y223 722 aaKnown RBP7.79□□□□□ -1.16
LINC00173-202ENST00000477702 MAP3K2Q9Y2U5 619 aa7.79□□□□□ -1.16
LINC00173-202ENST00000477702 ELL2O00472 640 aaPredicted RBP7.78□□□□□ -1.16
LINC00173-202ENST00000477702 COL6A1P12109 1028 aa7.78□□□□□ -1.16
LINC00173-202ENST00000477702 LMOD3Q0VAK6 560 aa7.78□□□□□ -1.16
LINC00173-202ENST00000477702 ETFBKMTQ8IXQ9 262 aa7.78□□□□□ -1.16
LINC00173-202ENST00000477702 CCER1Q8TC90 406 aaPredicted RBP7.78□□□□□ -1.16
LINC00173-202ENST00000477702 HELQQ8TDG4 1101 aa7.78□□□□□ -1.16
LINC00173-202ENST00000477702 HOOK2Q96ED9 719 aa7.78□□□□□ -1.16
LINC00173-202ENST00000477702 PNNQ9H307 717 aaKnown RBP7.78□□□□□ -1.16
LINC00173-202ENST00000477702 CRISPLD1Q9H336 500 aa7.78□□□□□ -1.16
LINC00173-202ENST00000477702 UTP3Q9NQZ2 479 aaKnown RBP eCLIP7.78□□□□□ -1.16
LINC00173-202ENST00000477702 TMOD2Q9NZR1 351 aa7.78□□□□□ -1.16
LINC00173-202ENST00000477702 SYNGAP1Q96PV0 1343 aa7.78□□□□□ -1.16
LINC00173-202ENST00000477702 CXCL11O14625 94 aa7.77□□□□□ -1.17
LINC00173-202ENST00000477702 MPSTP25325 297 aa7.77□□□□□ -1.17
LINC00173-202ENST00000477702 GYG1P46976 350 aa7.77□□□□□ -1.17
LINC00173-202ENST00000477702 TCP10Q12799 353 aa7.77□□□□□ -1.17
LINC00173-202ENST00000477702 CHAF1AQ13111 956 aaPredicted RBP7.77□□□□□ -1.17
LINC00173-202ENST00000477702 UBAP2LQ14157 1087 aaKnown RBP7.77□□□□□ -1.17
LINC00173-202ENST00000477702 GRIN2CQ14957 1233 aa7.77□□□□□ -1.17
LINC00173-202ENST00000477702 C11orf91Q3C1V1 193 aa7.77□□□□□ -1.17
LINC00173-202ENST00000477702 PGBD3Q8N328 593 aa7.77□□□□□ -1.17
LINC00173-202ENST00000477702 VWA5B2Q8N398 1253 aa7.77□□□□□ -1.17
LINC00173-202ENST00000477702 TRIB2Q92519 343 aa7.77□□□□□ -1.17
LINC00173-202ENST00000477702 IFT43Q96FT9 208 aa7.77□□□□□ -1.17
LINC00173-202ENST00000477702 NECAB3Q96P71 396 aaPredicted RBP7.77□□□□□ -1.17
LINC00173-202ENST00000477702 UHRF1Q96T88 793 aaPredicted RBP7.77□□□□□ -1.17
LINC00173-202ENST00000477702 PCGF6Q9BYE7 350 aa7.77□□□□□ -1.17
LINC00173-202ENST00000477702 ZHX2Q9Y6X8 837 aa7.77□□□□□ -1.17
LINC00173-202ENST00000477702 MYH3P11055 1940 aa7.76□□□□□ -1.17
LINC00173-202ENST00000477702 A0A0G2JLL6 359 aaPredicted RBP7.76□□□□□ -1.17
LINC00173-202ENST00000477702 ANKRD18BA2A2Z9 1011 aa7.76□□□□□ -1.17
LINC00173-202ENST00000477702 CDC14CA4D256 554 aa7.76□□□□□ -1.17
LINC00173-202ENST00000477702 PI4KAP2A4QPH2 592 aa7.76□□□□□ -1.17
LINC00173-202ENST00000477702 NEURL1BA8MQ27 555 aa7.76□□□□□ -1.17
LINC00173-202ENST00000477702 H3BRB1 525 aa7.76□□□□□ -1.17
LINC00173-202ENST00000477702 H7C1W4 665 aa7.76□□□□□ -1.17
LINC00173-202ENST00000477702 DDX58O95786 925 aaKnown RBP7.76□□□□□ -1.17
LINC00173-202ENST00000477702 SMAD3P84022 425 aaKnown RBP7.76□□□□□ -1.17
LINC00173-202ENST00000477702 ECM1Q16610 540 aa7.76□□□□□ -1.17
LINC00173-202ENST00000477702 APOBEC3HQ6NTF7 200 aaKnown RBP7.76□□□□□ -1.17
LINC00173-202ENST00000477702 FASTKD5Q7L8L6 764 aaKnown RBP7.76□□□□□ -1.17
LINC00173-202ENST00000477702 PRRT2Q7Z6L0 340 aaPredicted RBP7.76□□□□□ -1.17
LINC00173-202ENST00000477702 FAM83AQ86UY5 434 aa7.76□□□□□ -1.17
LINC00173-202ENST00000477702 ALYREFQ86V81 257 aaKnown RBP7.76□□□□□ -1.17
LINC00173-202ENST00000477702 TRIM22Q8IYM9 498 aa7.76□□□□□ -1.17
LINC00173-202ENST00000477702 PI4KAP1Q8N8J0 262 aa7.76□□□□□ -1.17
LINC00173-202ENST00000477702 TDRD7Q8NHU6 1098 aaKnown RBP7.76□□□□□ -1.17
LINC00173-202ENST00000477702 TEKT1Q969V4 418 aa7.76□□□□□ -1.17
LINC00173-202ENST00000477702 GTPBP3Q969Y2 492 aaKnown RBP7.76□□□□□ -1.17
LINC00173-202ENST00000477702 ZNF837Q96EG3 531 aaPredicted RBP7.76□□□□□ -1.17
LINC00173-202ENST00000477702 SNX27Q96L92 541 aa7.76□□□□□ -1.17
LINC00173-202ENST00000477702 ASB2Q96Q27 587 aa7.76□□□□□ -1.17
LINC00173-202ENST00000477702 SENP6Q9GZR1 1112 aaPredicted RBP7.76□□□□□ -1.17
LINC00173-202ENST00000477702 GZF1Q9H116 711 aaPredicted RBP7.76□□□□□ -1.17
LINC00173-202ENST00000477702 NUCKS1Q9H1E3 243 aaKnown RBP7.76□□□□□ -1.17
LINC00173-202ENST00000477702 TUT1Q9H6E5 874 aaKnown RBP7.76□□□□□ -1.17
LINC00173-202ENST00000477702 PRKAG2Q9UGJ0 569 aa7.76□□□□□ -1.17
LINC00173-202ENST00000477702 ZNF112Q9UJU3 913 aa7.76□□□□□ -1.17
LINC00173-202ENST00000477702 GJD2Q9UKL4 321 aa7.76□□□□□ -1.17
LINC00173-202ENST00000477702 HCN2Q9UL51 889 aa7.76□□□□□ -1.17
LINC00173-202ENST00000477702 SOWAHDA6NJG2 315 aa7.75□□□□□ -1.17
LINC00173-202ENST00000477702 ICMTO60725 284 aa7.75□□□□□ -1.17
LINC00173-202ENST00000477702 CSF1RP07333 972 aa7.75□□□□□ -1.17
LINC00173-202ENST00000477702 CYP2B6P20813 491 aa7.75□□□□□ -1.17
LINC00173-202ENST00000477702 CCND3P30281 292 aaPredicted RBP7.75□□□□□ -1.17
LINC00173-202ENST00000477702 HIBADHP31937 336 aaKnown RBP7.75□□□□□ -1.17
LINC00173-202ENST00000477702 NEXNQ0ZGT2 675 aa7.75□□□□□ -1.17
LINC00173-202ENST00000477702 NOL9Q5SY16 702 aaKnown RBP7.75□□□□□ -1.17
LINC00173-202ENST00000477702 TREML2Q5T2D2 321 aa7.75□□□□□ -1.17
LINC00173-202ENST00000477702 MAP3K21Q5TCX8 1036 aa7.75□□□□□ -1.17
LINC00173-202ENST00000477702 CCDC84Q86UT8 332 aaPredicted RBP7.75□□□□□ -1.17
LINC00173-202ENST00000477702 ATCAYQ86WG3 371 aa7.75□□□□□ -1.17
LINC00173-202ENST00000477702 CCDC146Q8IYE0 955 aa7.75□□□□□ -1.17
LINC00173-202ENST00000477702 ATXN2LQ8WWM7 1075 aaKnown RBP7.75□□□□□ -1.17
LINC00173-202ENST00000477702 C1QTNF1Q9BXJ1 281 aa7.75□□□□□ -1.17
LINC00173-202ENST00000477702 ZCCHC2Q9C0B9 1178 aaKnown RBP7.75□□□□□ -1.17
LINC00173-202ENST00000477702 PRDM5Q9NQX1 630 aaPredicted RBP7.75□□□□□ -1.17
LINC00173-202ENST00000477702 PICK1Q9NRD5 415 aa7.75□□□□□ -1.17
LINC00173-202ENST00000477702 MBIPQ9NS73 344 aa7.75□□□□□ -1.17
LINC00173-202ENST00000477702 STIM2Q9P246 746 aa7.75□□□□□ -1.17
LINC00173-202ENST00000477702 FRMD4AQ9P2Q2 1039 aaPredicted RBP7.75□□□□□ -1.17
LINC00173-202ENST00000477702 NXF1Q9UBU9 619 aaKnown RBP7.75□□□□□ -1.17
LINC00173-202ENST00000477702 DMGDHQ9UI17 866 aaKnown RBP7.75□□□□□ -1.17
LINC00173-202ENST00000477702 MTMR7Q9Y216 660 aa7.75□□□□□ -1.17
LINC00173-202ENST00000477702 USP20Q9Y2K6 914 aa7.75□□□□□ -1.17
LINC00173-202ENST00000477702 CHD9Q3L8U1 2897 aa7.74□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms