RNA–Protein interactions for RNA: ENST00000477360.2

CLCNKA-205, Transcript of chloride voltage-gated channel Ka, humanhuman

TSL 5

Gene CLCNKA, Length 400 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCNKA-205ENST00000477360 CRISPLD2Q9H0B8 497 aa14.45□□□□□ -0.1
CLCNKA-205ENST00000477360 RNF208Q9H0X6 261 aa14.45□□□□□ -0.1
CLCNKA-205ENST00000477360 ACAD9Q9H845 621 aa14.45□□□□□ -0.1
CLCNKA-205ENST00000477360 PFASO15067 1338 aa14.44□□□□□ -0.1
CLCNKA-205ENST00000477360 ECM2O94769 699 aaPredicted RBP14.44□□□□□ -0.1
CLCNKA-205ENST00000477360 SGPL1O95470 568 aa14.44□□□□□ -0.1
CLCNKA-205ENST00000477360 SOX10P56693 466 aa14.44□□□□□ -0.1
CLCNKA-205ENST00000477360 MLLT1Q03111 559 aaPredicted RBP14.44□□□□□ -0.1
CLCNKA-205ENST00000477360 TROAPQ12815 778 aa14.44□□□□□ -0.1
CLCNKA-205ENST00000477360 WTAPQ15007 396 aa14.44□□□□□ -0.1
CLCNKA-205ENST00000477360 MTFR1Q15390 333 aa14.44□□□□□ -0.1
CLCNKA-205ENST00000477360 ZNF792Q3KQV3 632 aa14.44□□□□□ -0.1
CLCNKA-205ENST00000477360 MAMDC4Q6UXC1 1216 aa14.44□□□□□ -0.1
CLCNKA-205ENST00000477360 RGS22Q8NE09 1264 aa14.44□□□□□ -0.1
CLCNKA-205ENST00000477360 MAML3Q96JK9 1138 aa14.44□□□□□ -0.1
CLCNKA-205ENST00000477360 XRN2Q9H0D6 950 aaKnown RBP eCLIP14.44□□□□□ -0.1
CLCNKA-205ENST00000477360 RAVER2Q9HCJ3 691 aaKnown RBP14.44□□□□□ -0.1
CLCNKA-205ENST00000477360 ISY1Q9ULR0 285 aaKnown RBP14.44□□□□□ -0.1
CLCNKA-205ENST00000477360 SYNGAP1Q96PV0 1343 aa14.43□□□□□ -0.1
CLCNKA-205ENST00000477360 PALM3A6NDB9 673 aaPredicted RBP14.43□□□□□ -0.1
CLCNKA-205ENST00000477360 COBLO75128 1261 aa14.43□□□□□ -0.1
CLCNKA-205ENST00000477360 DDAH1O94760 285 aa14.43□□□□□ -0.1
CLCNKA-205ENST00000477360 CALM1P0DP23 149 aa14.43□□□□□ -0.1
CLCNKA-205ENST00000477360 CALM2P0DP24 149 aa14.43□□□□□ -0.1
CLCNKA-205ENST00000477360 CALM3P0DP25 149 aa14.43□□□□□ -0.1
CLCNKA-205ENST00000477360 PRKAR2AP13861 404 aaKnown RBP14.43□□□□□ -0.1
CLCNKA-205ENST00000477360 HSPA4P34932 840 aa14.43□□□□□ -0.1
CLCNKA-205ENST00000477360 RCAN1P53805 252 aa14.43□□□□□ -0.1
CLCNKA-205ENST00000477360 TMEM67Q5HYA8 995 aa14.43□□□□□ -0.1
CLCNKA-205ENST00000477360 SAMD1Q6SPF0 538 aaPredicted RBP14.43□□□□□ -0.1
CLCNKA-205ENST00000477360 CATIPQ7Z7H3 387 aa14.43□□□□□ -0.1
CLCNKA-205ENST00000477360 SGMS1Q86VZ5 419 aa14.43□□□□□ -0.1
CLCNKA-205ENST00000477360 CPXCR1Q8N123 301 aa14.43□□□□□ -0.1
CLCNKA-205ENST00000477360 FBXL16Q8N461 479 aa14.43□□□□□ -0.1
CLCNKA-205ENST00000477360 U2AF1L4Q8WU68 220 aaKnown RBP14.43□□□□□ -0.1
CLCNKA-205ENST00000477360 LZTS2Q9BRK4 669 aa14.43□□□□□ -0.1
CLCNKA-205ENST00000477360 UNC93B1Q9H1C4 597 aa14.43□□□□□ -0.1
CLCNKA-205ENST00000477360 RIPK3Q9Y572 518 aa14.43□□□□□ -0.1
CLCNKA-205ENST00000477360 TAF6LQ9Y6J9 622 aa14.43□□□□□ -0.1
CLCNKA-205ENST00000477360 POTEFA5A3E0 1075 aa14.42□□□□□ -0.1
CLCNKA-205ENST00000477360 PRC1O43663 620 aa14.42□□□□□ -0.1
CLCNKA-205ENST00000477360 KIF5BP33176 963 aa14.42□□□□□ -0.1
CLCNKA-205ENST00000477360 ANTXR2P58335 489 aa14.42□□□□□ -0.1
CLCNKA-205ENST00000477360 CACNB2Q08289 660 aaPredicted RBP14.42□□□□□ -0.1
CLCNKA-205ENST00000477360 GRM4Q14833 912 aa14.42□□□□□ -0.1
CLCNKA-205ENST00000477360 TTBK2Q6IQ55 1244 aa14.42□□□□□ -0.1
CLCNKA-205ENST00000477360 ANKRD35Q8N283 1001 aa14.42□□□□□ -0.1
CLCNKA-205ENST00000477360 SAMD3Q8N6K7 520 aa14.42□□□□□ -0.1
CLCNKA-205ENST00000477360 NPLOC4Q8TAT6 608 aa14.42□□□□□ -0.1
CLCNKA-205ENST00000477360 MTMR8Q96EF0 704 aa14.42□□□□□ -0.1
CLCNKA-205ENST00000477360 DDX11Q96FC9 970 aa14.42□□□□□ -0.1
CLCNKA-205ENST00000477360 TRERF1Q96PN7 1200 aa14.42□□□□□ -0.1
CLCNKA-205ENST00000477360 NEK1Q96PY6 1258 aa14.42□□□□□ -0.1
CLCNKA-205ENST00000477360 TINF2Q9BSI4 451 aa14.42□□□□□ -0.1
CLCNKA-205ENST00000477360 LY9Q9HBG7 655 aa14.42□□□□□ -0.1
CLCNKA-205ENST00000477360 GPCPD1Q9NPB8 672 aa14.42□□□□□ -0.1
CLCNKA-205ENST00000477360 RNF146Q9NTX7 359 aa14.42□□□□□ -0.1
CLCNKA-205ENST00000477360 CCPG1Q9ULG6 757 aa14.42□□□□□ -0.1
CLCNKA-205ENST00000477360 COL11A1P12107 1806 aaPredicted RBP14.41□□□□□ -0.1
CLCNKA-205ENST00000477360 GNAQP50148 359 aa14.41□□□□□ -0.1
CLCNKA-205ENST00000477360 PPP2R5BQ15173 497 aa14.41□□□□□ -0.1
CLCNKA-205ENST00000477360 CCL14Q16627 93 aa14.41□□□□□ -0.1
CLCNKA-205ENST00000477360 DHX32Q7L7V1 743 aaKnown RBP14.41□□□□□ -0.1
CLCNKA-205ENST00000477360 UBE2Q1Q7Z7E8 422 aa14.41□□□□□ -0.1
CLCNKA-205ENST00000477360 TEX2Q8IWB9 1127 aa14.41□□□□□ -0.1
CLCNKA-205ENST00000477360 FAM133AQ8N9E0 248 aa14.41□□□□□ -0.1
CLCNKA-205ENST00000477360 AGBL1Q96MI9 1066 aa14.41□□□□□ -0.1
CLCNKA-205ENST00000477360 MAP3K20Q9NYL2 800 aaKnown RBP14.41□□□□□ -0.1
CLCNKA-205ENST00000477360 OGDHLQ9ULD0 1010 aa14.41□□□□□ -0.1
CLCNKA-205ENST00000477360 FRMPD2Q68DX3 1309 aaPredicted RBP14.41□□□□□ -0.1
CLCNKA-205ENST00000477360 KLRF2D3W0D1 207 aa14.4□□□□□ -0.1
CLCNKA-205ENST00000477360 SH2B2O14492 632 aaPredicted RBP14.4□□□□□ -0.1
CLCNKA-205ENST00000477360 CYBAP13498 195 aa14.4□□□□□ -0.1
CLCNKA-205ENST00000477360 SLC16A2P36021 539 aa14.4□□□□□ -0.1
CLCNKA-205ENST00000477360 EXOSC10Q01780 885 aaKnown RBP14.4□□□□□ -0.1
CLCNKA-205ENST00000477360 ADGRF4Q8IZF3 695 aa14.4□□□□□ -0.1
CLCNKA-205ENST00000477360 RIOX1Q9H6W3 641 aa14.4□□□□□ -0.1
CLCNKA-205ENST00000477360 FLRT1Q9NZU1 646 aa14.4□□□□□ -0.1
CLCNKA-205ENST00000477360 MAD2L2Q9UI95 211 aa14.4□□□□□ -0.1
CLCNKA-205ENST00000477360 ABCB11O95342 1321 aa14.4□□□□□ -0.1
CLCNKA-205ENST00000477360 POTEB2H3BUK9 544 aa14.39□□□□□ -0.11
CLCNKA-205ENST00000477360 SEPT4O43236 478 aa14.39□□□□□ -0.11
CLCNKA-205ENST00000477360 ALAS1P13196 640 aa14.39□□□□□ -0.11
CLCNKA-205ENST00000477360 EN2P19622 333 aaPredicted RBP14.39□□□□□ -0.11
CLCNKA-205ENST00000477360 PSMA5P28066 241 aa14.39□□□□□ -0.11
CLCNKA-205ENST00000477360 GHRHRQ02643 423 aa14.39□□□□□ -0.11
CLCNKA-205ENST00000477360 RASGRP2Q7LDG7 609 aa14.39□□□□□ -0.11
CLCNKA-205ENST00000477360 CTCFLQ8NI51 663 aaPredicted RBP14.39□□□□□ -0.11
CLCNKA-205ENST00000477360 SHISA4Q96DD7 197 aa14.39□□□□□ -0.11
CLCNKA-205ENST00000477360 DEFB118Q96PH6 123 aa14.39□□□□□ -0.11
CLCNKA-205ENST00000477360 SPZ1Q9BXG8 430 aa14.39□□□□□ -0.11
CLCNKA-205ENST00000477360 JMJD4Q9H9V9 463 aa14.39□□□□□ -0.11
CLCNKA-205ENST00000477360 A1CFQ9NQ94 594 aaKnown RBP14.39□□□□□ -0.11
CLCNKA-205ENST00000477360 CYP39A1Q9NYL5 469 aa14.39□□□□□ -0.11
CLCNKA-205ENST00000477360 ADD3Q9UEY8 706 aaKnown RBP14.39□□□□□ -0.11
CLCNKA-205ENST00000477360 MTMR7Q9Y216 660 aa14.39□□□□□ -0.11
CLCNKA-205ENST00000477360 CENPFP49454 3210 aa14.38□□□□□ -0.11
CLCNKA-205ENST00000477360 CCDC69A6NI79 296 aa14.38□□□□□ -0.11
CLCNKA-205ENST00000477360 ASB14A6NK59 587 aa14.38□□□□□ -0.11
CLCNKA-205ENST00000477360 B4DLN1 442 aa14.38□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 54.7 ms