RNA–Protein interactions for RNA: ENST00000477177.1

NDUFB5-208, Transcript of NADH:ubiquinone oxidoreductase subunit B5, human

TSL 3

Gene NDUFB5, Length 562 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NDUFB5-208	ENST00000477177	TTF1	Q15361	905 aa	Predicted RBP	12.8	□□□□□ -0.36
NDUFB5-208	ENST00000477177	PSRC1	Q6PGN9	363 aa	Predicted RBP	12.8	□□□□□ -0.36
NDUFB5-208	ENST00000477177	CCDC174	Q6PII3	467 aa		12.8	□□□□□ -0.36
NDUFB5-208	ENST00000477177	TMEM199	Q8N511	208 aa		12.8	□□□□□ -0.36
NDUFB5-208	ENST00000477177	FAM122A	Q96E09	287 aa		12.8	□□□□□ -0.36
NDUFB5-208	ENST00000477177	CCDC17	Q96LX7	622 aa		12.8	□□□□□ -0.36
NDUFB5-208	ENST00000477177	FGD4	Q96M96	766 aa		12.8	□□□□□ -0.36
NDUFB5-208	ENST00000477177	GLT1D1	Q96MS3	346 aa		12.8	□□□□□ -0.36
NDUFB5-208	ENST00000477177	NECAB3	Q96P71	396 aa	Predicted RBP	12.8	□□□□□ -0.36
NDUFB5-208	ENST00000477177	NKX2-4	Q9H2Z4	354 aa		12.8	□□□□□ -0.36
NDUFB5-208	ENST00000477177	YBX2	Q9Y2T7	364 aa	Known RBP	12.8	□□□□□ -0.36
NDUFB5-208	ENST00000477177	RIPK3	Q9Y572	518 aa		12.8	□□□□□ -0.36
NDUFB5-208	ENST00000477177		A0A0U1RQG5	324 aa	Predicted RBP	12.79	□□□□□ -0.36
NDUFB5-208	ENST00000477177	GABBR2	O75899	941 aa		12.79	□□□□□ -0.36
NDUFB5-208	ENST00000477177	ATP5J	P18859	108 aa		12.79	□□□□□ -0.36
NDUFB5-208	ENST00000477177	IGFBP4	P22692	258 aa		12.79	□□□□□ -0.36
NDUFB5-208	ENST00000477177	CYP2C18	P33260	490 aa		12.79	□□□□□ -0.36
NDUFB5-208	ENST00000477177	GJA9	P57773	515 aa		12.79	□□□□□ -0.36
NDUFB5-208	ENST00000477177	NKX3-2	P78367	333 aa		12.79	□□□□□ -0.36
NDUFB5-208	ENST00000477177	ACVR2B	Q13705	512 aa		12.79	□□□□□ -0.36
NDUFB5-208	ENST00000477177	RAB30	Q15771	203 aa		12.79	□□□□□ -0.36
NDUFB5-208	ENST00000477177	SLFNL1	Q499Z3	407 aa		12.79	□□□□□ -0.36
NDUFB5-208	ENST00000477177	FAM83B	Q5T0W9	1011 aa		12.79	□□□□□ -0.36
NDUFB5-208	ENST00000477177	C12orf60	Q5U649	245 aa		12.79	□□□□□ -0.36
NDUFB5-208	ENST00000477177	ZNF467	Q7Z7K2	595 aa	Predicted RBP	12.79	□□□□□ -0.36
NDUFB5-208	ENST00000477177	PCSK9	Q8NBP7	692 aa	Known RBP	12.79	□□□□□ -0.36
NDUFB5-208	ENST00000477177	DNAJC2	Q99543	621 aa	Known RBP	12.79	□□□□□ -0.36
NDUFB5-208	ENST00000477177	GNL3	Q9BVP2	549 aa	Known RBP eCLIP	12.79	□□□□□ -0.36
NDUFB5-208	ENST00000477177	PPP1R12C	Q9BZL4	782 aa		12.79	□□□□□ -0.36
NDUFB5-208	ENST00000477177	BOLA2	Q9H3K6	86 aa		12.79	□□□□□ -0.36
NDUFB5-208	ENST00000477177	ARMT1	Q9H993	441 aa		12.79	□□□□□ -0.36
NDUFB5-208	ENST00000477177	KANSL2	Q9H9L4	492 aa		12.79	□□□□□ -0.36
NDUFB5-208	ENST00000477177	IL23A	Q9NPF7	189 aa		12.79	□□□□□ -0.36
NDUFB5-208	ENST00000477177	MSRA	Q9UJ68	235 aa		12.79	□□□□□ -0.36
NDUFB5-208	ENST00000477177	ZHX1	Q9UKY1	873 aa	Predicted RBP	12.79	□□□□□ -0.36
NDUFB5-208	ENST00000477177	PRRC2B	Q5JSZ5	2229 aa	Known RBP	12.78	□□□□□ -0.36
NDUFB5-208	ENST00000477177	GOLIM4	O00461	696 aa		12.78	□□□□□ -0.36
NDUFB5-208	ENST00000477177	C6orf222	P0C671	652 aa	Predicted RBP	12.78	□□□□□ -0.36
NDUFB5-208	ENST00000477177	VASP	P50552	380 aa	Predicted RBP	12.78	□□□□□ -0.36
NDUFB5-208	ENST00000477177	C16orf86	Q6ZW13	317 aa		12.78	□□□□□ -0.36
NDUFB5-208	ENST00000477177	DHX30	Q7L2E3	1194 aa	Known RBP eCLIP	12.78	□□□□□ -0.36
NDUFB5-208	ENST00000477177	SLC43A3	Q8NBI5	491 aa		12.78	□□□□□ -0.36
NDUFB5-208	ENST00000477177	VWCE	Q96DN2	955 aa		12.78	□□□□□ -0.36
NDUFB5-208	ENST00000477177	TEX13B	Q9BXU2	312 aa		12.78	□□□□□ -0.36
NDUFB5-208	ENST00000477177	KATNBL1	Q9H079	304 aa		12.78	□□□□□ -0.36
NDUFB5-208	ENST00000477177	ATP8A2	Q9NTI2	1148 aa		12.78	□□□□□ -0.36
NDUFB5-208	ENST00000477177	CDKN2AIP	Q9NXV6	580 aa	Predicted RBP	12.78	□□□□□ -0.36
NDUFB5-208	ENST00000477177	TFF2	Q03403	129 aa		12.77	□□□□□ -0.37
NDUFB5-208	ENST00000477177	AAMP	Q13685	434 aa		12.77	□□□□□ -0.37
NDUFB5-208	ENST00000477177	CCDC144B	Q3MJ40	725 aa		12.77	□□□□□ -0.37
NDUFB5-208	ENST00000477177	GNAS	Q5JWF2	1037 aa		12.77	□□□□□ -0.37
NDUFB5-208	ENST00000477177	SNRNP48	Q6IEG0	339 aa	Known RBP	12.77	□□□□□ -0.37
NDUFB5-208	ENST00000477177	NUP88	Q99567	741 aa	Predicted RBP	12.77	□□□□□ -0.37
NDUFB5-208	ENST00000477177	HAUS7	Q99871	368 aa		12.77	□□□□□ -0.37
NDUFB5-208	ENST00000477177	ABHD16B	Q9H3Z7	469 aa		12.77	□□□□□ -0.37
NDUFB5-208	ENST00000477177	SLC28A3	Q9HAS3	691 aa		12.77	□□□□□ -0.37
NDUFB5-208	ENST00000477177	GOPC	Q9HD26	462 aa		12.77	□□□□□ -0.37
NDUFB5-208	ENST00000477177	PAG1	Q9NWQ8	432 aa		12.77	□□□□□ -0.37
NDUFB5-208	ENST00000477177	UMODL1	Q5DID0	1318 aa		12.77	□□□□□ -0.37
NDUFB5-208	ENST00000477177	PIEZO1	Q92508	2521 aa		12.77	□□□□□ -0.37
NDUFB5-208	ENST00000477177	USP17L12	C9JPN9	530 aa		12.76	□□□□□ -0.37
NDUFB5-208	ENST00000477177	USP17L21	D6R901	530 aa		12.76	□□□□□ -0.37
NDUFB5-208	ENST00000477177	ATP2A1	O14983	1001 aa		12.76	□□□□□ -0.37
NDUFB5-208	ENST00000477177	MBD4	O95243	580 aa		12.76	□□□□□ -0.37
NDUFB5-208	ENST00000477177	FGB	P02675	491 aa		12.76	□□□□□ -0.37
NDUFB5-208	ENST00000477177	CHGB	P05060	677 aa		12.76	□□□□□ -0.37
NDUFB5-208	ENST00000477177	VTI1A	Q96AJ9	217 aa		12.76	□□□□□ -0.37
NDUFB5-208	ENST00000477177	DDX11	Q96FC9	970 aa		12.76	□□□□□ -0.37
NDUFB5-208	ENST00000477177	SLF1	Q9BQI6	1058 aa		12.76	□□□□□ -0.37
NDUFB5-208	ENST00000477177	C1QTNF1	Q9BXJ1	281 aa		12.76	□□□□□ -0.37
NDUFB5-208	ENST00000477177	ECHDC1	Q9NTX5	307 aa		12.76	□□□□□ -0.37
NDUFB5-208	ENST00000477177	ASTN1	O14525	1302 aa		12.76	□□□□□ -0.37
NDUFB5-208	ENST00000477177	GRIN2D	O15399	1336 aa		12.76	□□□□□ -0.37
NDUFB5-208	ENST00000477177	TLR3	O15455	904 aa	Known RBP	12.75	□□□□□ -0.37
NDUFB5-208	ENST00000477177	MYOG	P15173	224 aa		12.75	□□□□□ -0.37
NDUFB5-208	ENST00000477177	ADD2	P35612	726 aa		12.75	□□□□□ -0.37
NDUFB5-208	ENST00000477177	KCNQ1	P51787	676 aa		12.75	□□□□□ -0.37
NDUFB5-208	ENST00000477177	RABGGTB	P53611	331 aa		12.75	□□□□□ -0.37
NDUFB5-208	ENST00000477177	BEX3	Q00994	111 aa		12.75	□□□□□ -0.37
NDUFB5-208	ENST00000477177	HDAC1	Q13547	482 aa	Predicted RBP	12.75	□□□□□ -0.37
NDUFB5-208	ENST00000477177	ARMCX2	Q7L311	632 aa		12.75	□□□□□ -0.37
NDUFB5-208	ENST00000477177	OTOP2	Q7RTS6	562 aa		12.75	□□□□□ -0.37
NDUFB5-208	ENST00000477177	IL27	Q8NEV9	243 aa		12.75	□□□□□ -0.37
NDUFB5-208	ENST00000477177	GPATCH3	Q96I76	525 aa		12.75	□□□□□ -0.37
NDUFB5-208	ENST00000477177	SPC25	Q9HBM1	224 aa		12.75	□□□□□ -0.37
NDUFB5-208	ENST00000477177	C11orf97	A0A1B0GVM6	126 aa	Predicted RBP	12.74	□□□□□ -0.37
NDUFB5-208	ENST00000477177	NDUFB10	O96000	172 aa		12.74	□□□□□ -0.37
NDUFB5-208	ENST00000477177	POU3F3	P20264	500 aa	Predicted RBP	12.74	□□□□□ -0.37
NDUFB5-208	ENST00000477177	CTR9	Q6PD62	1173 aa		12.74	□□□□□ -0.37
NDUFB5-208	ENST00000477177	CCDC144CP	Q8IYA2	1237 aa		12.74	□□□□□ -0.37
NDUFB5-208	ENST00000477177	PRPF38A	Q8NAV1	312 aa	Known RBP	12.74	□□□□□ -0.37
NDUFB5-208	ENST00000477177	NOC4L	Q9BVI4	516 aa	Known RBP	12.74	□□□□□ -0.37
NDUFB5-208	ENST00000477177	WNT8A	Q9H1J5	351 aa		12.74	□□□□□ -0.37
NDUFB5-208	ENST00000477177	MTIF3	Q9H2K0	278 aa	Known RBP	12.74	□□□□□ -0.37
NDUFB5-208	ENST00000477177	HIPK3	Q9H422	1215 aa		12.74	□□□□□ -0.37
NDUFB5-208	ENST00000477177	ZBTB47	Q9UFB7	747 aa	Predicted RBP	12.74	□□□□□ -0.37
NDUFB5-208	ENST00000477177	ARIH1	Q9Y4X5	557 aa	Predicted RBP	12.74	□□□□□ -0.37
NDUFB5-208	ENST00000477177	SUPT16H	Q9Y5B9	1047 aa	Known RBP	12.74	□□□□□ -0.37
NDUFB5-208	ENST00000477177	LRRC37A2	A6NM11	1700 aa		12.74	□□□□□ -0.37
NDUFB5-208	ENST00000477177	MYH4	Q9Y623	1939 aa		12.73	□□□□□ -0.37

Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms