RNA–Protein interactions for RNA: ENST00000477069.5

NUP188-205, Transcript of nucleoporin 188, humanhuman

TSL 1 (best)

Gene NUP188, Length 2,941 nt, Biotype retained intron, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP188-205ENST00000477069 SMYD4Q8IYR2 804 aaPredicted RBP13.02□□□□□ -0.33
NUP188-205ENST00000477069 ZNF622Q969S3 477 aaKnown RBP eCLIP13.02□□□□□ -0.33
NUP188-205ENST00000477069 PSDA5PKW4 1024 aaPredicted RBP13.02□□□□□ -0.33
NUP188-205ENST00000477069 PP2D1A8MPX8 630 aa13.02□□□□□ -0.33
NUP188-205ENST00000477069 EDIL3O43854 480 aa13.02□□□□□ -0.33
NUP188-205ENST00000477069 HDLBPQ00341 1268 aaKnown RBP13.02□□□□□ -0.33
NUP188-205ENST00000477069 ZNF543Q08ER8 600 aa13.02□□□□□ -0.33
NUP188-205ENST00000477069 ORC2Q13416 577 aaPredicted RBP13.02□□□□□ -0.33
NUP188-205ENST00000477069 HSP90AA4PQ58FG1 418 aa13.02□□□□□ -0.33
NUP188-205ENST00000477069 C7orf43Q8WVR3 580 aa13.02□□□□□ -0.33
NUP188-205ENST00000477069 PCDHAC2Q9Y5I4 1007 aa13.02□□□□□ -0.33
NUP188-205ENST00000477069 CTIFO43310 598 aaKnown RBP13.01□□□□□ -0.33
NUP188-205ENST00000477069 TXLNAP40222 546 aa13.01□□□□□ -0.33
NUP188-205ENST00000477069 PTPN21Q16825 1174 aa13.01□□□□□ -0.33
NUP188-205ENST00000477069 NEK8Q86SG6 692 aa13.01□□□□□ -0.33
NUP188-205ENST00000477069 TMX4Q9H1E5 349 aaPredicted RBP13.01□□□□□ -0.33
NUP188-205ENST00000477069 ECE2O60344 883 aa13.01□□□□□ -0.33
NUP188-205ENST00000477069 ZNF658Q5TYW1 1059 aaPredicted RBP13.01□□□□□ -0.33
NUP188-205ENST00000477069 CCDC112Q8NEF3 446 aa13.01□□□□□ -0.33
NUP188-205ENST00000477069 MTMR8Q96EF0 704 aa13.01□□□□□ -0.33
NUP188-205ENST00000477069 IDI2Q9BXS1 227 aa13.01□□□□□ -0.33
NUP188-205ENST00000477069 VAT1LQ9HCJ6 419 aa13.01□□□□□ -0.33
NUP188-205ENST00000477069 KBTBD4Q9NVX7 518 aa13.01□□□□□ -0.33
NUP188-205ENST00000477069 FAM198AQ9UFP1 575 aa13.01□□□□□ -0.33
NUP188-205ENST00000477069 H0YIN7 160 aa13□□□□□ -0.33
NUP188-205ENST00000477069 PPP1R11O60927 126 aaPredicted RBP13□□□□□ -0.33
NUP188-205ENST00000477069 NPM3O75607 178 aaKnown RBP13□□□□□ -0.33
NUP188-205ENST00000477069 RPN1P04843 607 aaKnown RBP13□□□□□ -0.33
NUP188-205ENST00000477069 OR52Z1P0C646 297 aa13□□□□□ -0.33
NUP188-205ENST00000477069 SLURP2P0DP57 97 aa13□□□□□ -0.33
NUP188-205ENST00000477069 PBX1P40424 430 aa13□□□□□ -0.33
NUP188-205ENST00000477069 STAT6P42226 847 aa13□□□□□ -0.33
NUP188-205ENST00000477069 EIF6P56537 245 aaKnown RBP13□□□□□ -0.33
NUP188-205ENST00000477069 CEP135Q66GS9 1140 aa13□□□□□ -0.33
NUP188-205ENST00000477069 PPP1R13BQ96KQ4 1090 aa13□□□□□ -0.33
NUP188-205ENST00000477069 AK8Q96MA6 479 aa13□□□□□ -0.33
NUP188-205ENST00000477069 JMJD4Q9H9V9 463 aa13□□□□□ -0.33
NUP188-205ENST00000477069 PAXBP1Q9Y5B6 917 aa13□□□□□ -0.33
NUP188-205ENST00000477069 MYH7BA7E2Y1 1941 aa13□□□□□ -0.33
NUP188-205ENST00000477069 HLA-DOAP06340 250 aa13□□□□□ -0.33
NUP188-205ENST00000477069 SOGA3Q5TF21 947 aa13□□□□□ -0.33
NUP188-205ENST00000477069 SPECC1LQ69YQ0 1117 aa13□□□□□ -0.33
NUP188-205ENST00000477069 PPP1R18Q6NYC8 613 aa13□□□□□ -0.33
NUP188-205ENST00000477069 REXO1Q8N1G1 1221 aaKnown RBP13□□□□□ -0.33
NUP188-205ENST00000477069 TMEM260Q9NX78 707 aa13□□□□□ -0.33
NUP188-205ENST00000477069 G3V3G9 751 aa12.99□□□□□ -0.33
NUP188-205ENST00000477069 KLRC4O43908 158 aa12.99□□□□□ -0.33
NUP188-205ENST00000477069 CCNT1O60563 726 aaKnown RBP12.99□□□□□ -0.33
NUP188-205ENST00000477069 MYL1P05976 194 aa12.99□□□□□ -0.33
NUP188-205ENST00000477069 DCAF8Q5TAQ9 597 aa12.99□□□□□ -0.33
NUP188-205ENST00000477069 SH3BP5LQ7L8J4 393 aa12.99□□□□□ -0.33
NUP188-205ENST00000477069 TBCKQ8TEA7 893 aa12.99□□□□□ -0.33
NUP188-205ENST00000477069 RMND1Q9NWS8 449 aa12.99□□□□□ -0.33
NUP188-205ENST00000477069 TRMT1Q9NXH9 659 aaKnown RBP12.99□□□□□ -0.33
NUP188-205ENST00000477069 RWDD2AQ9UIY3 292 aa12.99□□□□□ -0.33
NUP188-205ENST00000477069 CTNND2Q9UQB3 1225 aa12.99□□□□□ -0.33
NUP188-205ENST00000477069 COL2A1P02458 1487 aaPredicted RBP12.99□□□□□ -0.33
NUP188-205ENST00000477069 CDK11BP21127 795 aaKnown RBP12.99□□□□□ -0.33
NUP188-205ENST00000477069 CLK2P49760 499 aaKnown RBP12.99□□□□□ -0.33
NUP188-205ENST00000477069 STX17P56962 302 aa12.99□□□□□ -0.33
NUP188-205ENST00000477069 KCNB1Q14721 858 aa12.99□□□□□ -0.33
NUP188-205ENST00000477069 PTPN14Q15678 1187 aa12.99□□□□□ -0.33
NUP188-205ENST00000477069 LETM2Q2VYF4 491 aa12.99□□□□□ -0.33
NUP188-205ENST00000477069 KLHL10Q6JEL2 608 aa12.99□□□□□ -0.33
NUP188-205ENST00000477069 KIAA0825Q8IV33 1275 aa12.99□□□□□ -0.33
NUP188-205ENST00000477069 ADGRF4Q8IZF3 695 aa12.99□□□□□ -0.33
NUP188-205ENST00000477069 TC2NQ8N9U0 490 aa12.99□□□□□ -0.33
NUP188-205ENST00000477069 MTMR9Q96QG7 549 aa12.99□□□□□ -0.33
NUP188-205ENST00000477069 BIN2Q9UBW5 565 aaPredicted RBP12.99□□□□□ -0.33
NUP188-205ENST00000477069 ADD3Q9UEY8 706 aaKnown RBP12.99□□□□□ -0.33
NUP188-205ENST00000477069 DDTLA6NHG4 134 aaPredicted RBP12.99□□□□□ -0.33
NUP188-205ENST00000477069 CHRNA5P30532 468 aa12.99□□□□□ -0.33
NUP188-205ENST00000477069 GOLGA8FQ08AF8 430 aa12.99□□□□□ -0.33
NUP188-205ENST00000477069 GOLGA8DPQ0D2H9 430 aa12.99□□□□□ -0.33
NUP188-205ENST00000477069 RRAGBQ5VZM2 374 aa12.99□□□□□ -0.33
NUP188-205ENST00000477069 ZNF710Q8N1W2 664 aa12.99□□□□□ -0.33
NUP188-205ENST00000477069 COA7Q96BR5 231 aa12.99□□□□□ -0.33
NUP188-205ENST00000477069 CCDC17Q96LX7 622 aa12.99□□□□□ -0.33
NUP188-205ENST00000477069 DHX36Q9H2U1 1008 aaKnown RBP12.99□□□□□ -0.33
NUP188-205ENST00000477069 GPCPD1Q9NPB8 672 aa12.99□□□□□ -0.33
NUP188-205ENST00000477069 SERPINA10Q9UK55 444 aa12.99□□□□□ -0.33
NUP188-205ENST00000477069 PNMA6FA0A0J9YX94 578 aa12.98□□□□□ -0.33
NUP188-205ENST00000477069 RXRBP28702 533 aa12.98□□□□□ -0.33
NUP188-205ENST00000477069 ADCY7P51828 1080 aa12.98□□□□□ -0.33
NUP188-205ENST00000477069 SEMA3FQ13275 785 aa12.98□□□□□ -0.33
NUP188-205ENST00000477069 TTBK2Q6IQ55 1244 aa12.98□□□□□ -0.33
NUP188-205ENST00000477069 TATDN1Q6P1N9 297 aa12.98□□□□□ -0.33
NUP188-205ENST00000477069 IGSF22Q8N9C0 903 aa12.98□□□□□ -0.33
NUP188-205ENST00000477069 TSC1Q92574 1164 aa12.98□□□□□ -0.33
NUP188-205ENST00000477069 MKL1Q969V6 931 aa12.98□□□□□ -0.33
NUP188-205ENST00000477069 MMTAG2Q9BU76 263 aaKnown RBP12.98□□□□□ -0.33
NUP188-205ENST00000477069 CUEDC2Q9H467 287 aa12.98□□□□□ -0.33
NUP188-205ENST00000477069 MAGEF1Q9HAY2 307 aa12.98□□□□□ -0.33
NUP188-205ENST00000477069 ATRNL1Q5VV63 1379 aa12.98□□□□□ -0.33
NUP188-205ENST00000477069 RRP9O43818 475 aaKnown RBP12.98□□□□□ -0.33
NUP188-205ENST00000477069 UBA7P41226 1012 aa12.98□□□□□ -0.33
NUP188-205ENST00000477069 CACNB3P54284 484 aa12.98□□□□□ -0.33
NUP188-205ENST00000477069 GPATCH4Q5T3I0 446 aaKnown RBP12.98□□□□□ -0.33
NUP188-205ENST00000477069 JAKMIP3Q5VZ66 844 aa12.98□□□□□ -0.33
NUP188-205ENST00000477069 FCHSD1Q86WN1 690 aa12.98□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms