RNA–Protein interactions for RNA: ENST00000476792.1

LIMK1-204, Transcript of LIM domain kinase 1, humanhuman

TSL 2

Gene LIMK1, Length 785 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK1-204ENST00000476792 LRRC26Q2I0M4 334 aa25.17■■□□□ 1.62
LIMK1-204ENST00000476792 ARRDC4Q8NCT1 418 aa25.17■■□□□ 1.62
LIMK1-204ENST00000476792 RNF146Q9NTX7 359 aa25.17■■□□□ 1.62
LIMK1-204ENST00000476792 CNPY2Q9Y2B0 182 aa25.17■■□□□ 1.62
LIMK1-204ENST00000476792 TRIOBPQ9H2D6 2365 aa25.17■■□□□ 1.62
LIMK1-204ENST00000476792 DNAJC25-GNG10A0A024R161 153 aa25.16■■□□□ 1.62
LIMK1-204ENST00000476792 DNM1LO00429 736 aa25.16■■□□□ 1.62
LIMK1-204ENST00000476792 ATN1P54259 1190 aaPredicted RBP25.16■■□□□ 1.62
LIMK1-204ENST00000476792 IMMTQ16891 758 aaKnown RBP25.16■■□□□ 1.62
LIMK1-204ENST00000476792 ACAD9Q9H845 621 aa25.16■■□□□ 1.62
LIMK1-204ENST00000476792 NRBP1Q9UHY1 535 aa25.16■■□□□ 1.62
LIMK1-204ENST00000476792 CTNNA3Q9UI47 895 aa25.16■■□□□ 1.62
LIMK1-204ENST00000476792 B4E1Z4 1266 aa25.15■■□□□ 1.62
LIMK1-204ENST00000476792 KDM4AO75164 1064 aa25.15■■□□□ 1.62
LIMK1-204ENST00000476792 TTC14Q96N46 770 aa25.15■■□□□ 1.62
LIMK1-204ENST00000476792 TRERF1Q96PN7 1200 aa25.15■■□□□ 1.62
LIMK1-204ENST00000476792 PCDH10Q9P2E7 1040 aa25.15■■□□□ 1.62
LIMK1-204ENST00000476792 ZHX1Q9UKY1 873 aaPredicted RBP25.15■■□□□ 1.62
LIMK1-204ENST00000476792 KBTBD13C9JR72 458 aa25.14■■□□□ 1.62
LIMK1-204ENST00000476792 SNAI1O95863 264 aaPredicted RBP25.14■■□□□ 1.62
LIMK1-204ENST00000476792 ZNF865P0CJ78 1059 aaPredicted RBP25.14■■□□□ 1.62
LIMK1-204ENST00000476792 RARBP10826 455 aa25.14■■□□□ 1.62
LIMK1-204ENST00000476792 SYDE2Q5VT97 1194 aa25.14■■□□□ 1.62
LIMK1-204ENST00000476792 LENG1Q96BZ8 264 aaPredicted RBP25.14■■□□□ 1.62
LIMK1-204ENST00000476792 CCPG1Q9ULG6 757 aa25.14■■□□□ 1.62
LIMK1-204ENST00000476792 PDHBP11177 359 aa25.13■■□□□ 1.61
LIMK1-204ENST00000476792 CNTN2Q02246 1040 aa25.13■■□□□ 1.61
LIMK1-204ENST00000476792 XPNPEP3Q9NQH7 507 aa25.13■■□□□ 1.61
LIMK1-204ENST00000476792 POTEB2H3BUK9 544 aa25.12■■□□□ 1.61
LIMK1-204ENST00000476792 PGK1P00558 417 aa25.12■■□□□ 1.61
LIMK1-204ENST00000476792 CHMLP26374 656 aa25.12■■□□□ 1.61
LIMK1-204ENST00000476792 LRRC41Q15345 812 aa25.12■■□□□ 1.61
LIMK1-204ENST00000476792 TKFCQ3LXA3 575 aa25.12■■□□□ 1.61
LIMK1-204ENST00000476792 MUM1L1Q5H9M0 696 aa25.12■■□□□ 1.61
LIMK1-204ENST00000476792 DHX30Q7L2E3 1194 aaKnown RBP eCLIP25.12■■□□□ 1.61
LIMK1-204ENST00000476792 IQCA1Q86XH1 822 aa25.12■■□□□ 1.61
LIMK1-204ENST00000476792 MSL3Q8N5Y2 521 aaKnown RBP25.12■■□□□ 1.61
LIMK1-204ENST00000476792 FERMT2Q96AC1 680 aa25.12■■□□□ 1.61
LIMK1-204ENST00000476792 FGD4Q96M96 766 aa25.12■■□□□ 1.61
LIMK1-204ENST00000476792 A1CFQ9NQ94 594 aaKnown RBP25.12■■□□□ 1.61
LIMK1-204ENST00000476792 SYNGAP1Q96PV0 1343 aa25.12■■□□□ 1.61
LIMK1-204ENST00000476792 AKR1A1P14550 325 aa25.11■■□□□ 1.61
LIMK1-204ENST00000476792 MAMDC4Q6UXC1 1216 aa25.11■■□□□ 1.61
LIMK1-204ENST00000476792 BTNL9Q6UXG8 535 aa25.11■■□□□ 1.61
LIMK1-204ENST00000476792 RUFY2Q8WXA3 655 aa25.11■■□□□ 1.61
LIMK1-204ENST00000476792 RANBP17Q9H2T7 1088 aaKnown RBP25.11■■□□□ 1.61
LIMK1-204ENST00000476792 CDKN2AIPQ9NXV6 580 aaPredicted RBP25.11■■□□□ 1.61
LIMK1-204ENST00000476792 LAMA4Q16363 1823 aa25.11■■□□□ 1.61
LIMK1-204ENST00000476792 GOLGA8HP0CJ92 632 aa25.1■■□□□ 1.61
LIMK1-204ENST00000476792 ADCYAP1R1P41586 468 aa25.1■■□□□ 1.61
LIMK1-204ENST00000476792 FXR1P51114 621 aaKnown RBP eCLIP25.1■■□□□ 1.61
LIMK1-204ENST00000476792 ZNF543Q08ER8 600 aa25.1■■□□□ 1.61
LIMK1-204ENST00000476792 NSMFQ6X4W1 530 aa25.1■■□□□ 1.61
LIMK1-204ENST00000476792 ARMCX2Q7L311 632 aa25.1■■□□□ 1.61
LIMK1-204ENST00000476792 ZNF467Q7Z7K2 595 aaPredicted RBP25.1■■□□□ 1.61
LIMK1-204ENST00000476792 DGKHQ86XP1 1220 aa25.1■■□□□ 1.61
LIMK1-204ENST00000476792 ZSCAN10Q96SZ4 725 aaPredicted RBP25.1■■□□□ 1.61
LIMK1-204ENST00000476792 ZSWIM5Q9P217 1185 aa25.1■■□□□ 1.61
LIMK1-204ENST00000476792 FAM184BQ9ULE4 1060 aa25.1■■□□□ 1.61
LIMK1-204ENST00000476792 RAD50Q92878 1312 aa25.1■■□□□ 1.61
LIMK1-204ENST00000476792 MCM3APO60318 1980 aa25.09■■□□□ 1.61
LIMK1-204ENST00000476792 ICAM1P05362 532 aa25.09■■□□□ 1.61
LIMK1-204ENST00000476792 CCDC144CPQ8IYA2 1237 aa25.09■■□□□ 1.61
LIMK1-204ENST00000476792 FAM133AQ8N9E0 248 aa25.09■■□□□ 1.61
LIMK1-204ENST00000476792 KRT23Q9C075 422 aa25.09■■□□□ 1.61
LIMK1-204ENST00000476792 PRO3102Q9H379 93 aa25.09■■□□□ 1.61
LIMK1-204ENST00000476792 RTP1P59025 263 aa25.08■■□□□ 1.61
LIMK1-204ENST00000476792 PTH1RQ03431 593 aa25.08■■□□□ 1.61
LIMK1-204ENST00000476792 ACVR2BQ13705 512 aa25.08■■□□□ 1.61
LIMK1-204ENST00000476792 CCDC178Q5BJE1 867 aa25.08■■□□□ 1.61
LIMK1-204ENST00000476792 CPVLQ9H3G5 476 aa25.08■■□□□ 1.61
LIMK1-204ENST00000476792 KAT14Q9H8E8 782 aa25.08■■□□□ 1.61
LIMK1-204ENST00000476792 ATP11BQ9Y2G3 1177 aa25.08■■□□□ 1.61
LIMK1-204ENST00000476792 SOWAHBA6NEL2 793 aa25.07■■□□□ 1.6
LIMK1-204ENST00000476792 SNHG28P0DPA3 235 aa25.07■■□□□ 1.6
LIMK1-204ENST00000476792 MAGEA10P43363 369 aaPredicted RBP25.07■■□□□ 1.6
LIMK1-204ENST00000476792 SLC39A5Q6ZMH5 540 aa25.07■■□□□ 1.6
LIMK1-204ENST00000476792 RNF180Q86T96 592 aa25.07■■□□□ 1.6
LIMK1-204ENST00000476792 PNMA1Q8ND90 353 aa25.07■■□□□ 1.6
LIMK1-204ENST00000476792 UBAC1Q9BSL1 405 aa25.07■■□□□ 1.6
LIMK1-204ENST00000476792 UBA5Q9GZZ9 404 aa25.07■■□□□ 1.6
LIMK1-204ENST00000476792 CNNM2Q9H8M5 875 aa25.07■■□□□ 1.6
LIMK1-204ENST00000476792 DDX49Q9Y6V7 483 aaKnown RBP25.07■■□□□ 1.6
LIMK1-204ENST00000476792 ENAHQ8N8S7 591 aaPredicted RBP25.06■■□□□ 1.6
LIMK1-204ENST00000476792 PURBQ96QR8 312 aaKnown RBP25.06■■□□□ 1.6
LIMK1-204ENST00000476792 ABHD16BQ9H3Z7 469 aa25.06■■□□□ 1.6
LIMK1-204ENST00000476792 CYP39A1Q9NYL5 469 aa25.06■■□□□ 1.6
LIMK1-204ENST00000476792 TNKSO95271 1327 aa25.06■■□□□ 1.6
LIMK1-204ENST00000476792 NT5C2P49902 561 aa25.05■■□□□ 1.6
LIMK1-204ENST00000476792 CCDC144BQ3MJ40 725 aa25.05■■□□□ 1.6
LIMK1-204ENST00000476792 GDF15Q99988 308 aa25.05■■□□□ 1.6
LIMK1-204ENST00000476792 NFIBO00712 420 aa25.04■■□□□ 1.6
LIMK1-204ENST00000476792 MDM2Q00987 491 aaPredicted RBP25.04■■□□□ 1.6
LIMK1-204ENST00000476792 BAATQ14032 418 aaPredicted RBP25.04■■□□□ 1.6
LIMK1-204ENST00000476792 GPATCH4Q5T3I0 446 aaKnown RBP25.04■■□□□ 1.6
LIMK1-204ENST00000476792 ANKS1AQ92625 1134 aa25.04■■□□□ 1.6
LIMK1-204ENST00000476792 PHF24Q9UPV7 400 aa25.04■■□□□ 1.6
LIMK1-204ENST00000476792 PTPDC1A2A3K4 754 aa25.03■■□□□ 1.6
LIMK1-204ENST00000476792 ASB14A6NK59 587 aa25.03■■□□□ 1.6
LIMK1-204ENST00000476792 SGSM2O43147 1006 aa25.03■■□□□ 1.6
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms