RNA–Protein interactions for RNA: ENST00000476772.5

VEGFA-211, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best)

Gene VEGFA, Length 1,683 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-211ENST00000476772 GNA11P29992 359 aa33.07■■■□□ 2.89
VEGFA-211ENST00000476772 IREB2P48200 963 aaKnown RBP33.07■■■□□ 2.89
VEGFA-211ENST00000476772 BACE1P56817 501 aa33.07■■■□□ 2.89
VEGFA-211ENST00000476772 FEM1BQ9UK73 627 aa33.07■■■□□ 2.89
VEGFA-211ENST00000476772 PCDHA6Q9UN73 950 aa33.07■■■□□ 2.89
VEGFA-211ENST00000476772 PCDHA8Q9Y5H6 950 aa33.07■■■□□ 2.89
VEGFA-211ENST00000476772 TRIM75PA6NK02 468 aa33.07■■■□□ 2.88
VEGFA-211ENST00000476772 PIK3AP1Q6ZUJ8 805 aa33.07■■■□□ 2.88
VEGFA-211ENST00000476772 FAM160B2Q86V87 743 aa33.07■■■□□ 2.88
VEGFA-211ENST00000476772 PGBD1Q96JS3 809 aa33.07■■■□□ 2.88
VEGFA-211ENST00000476772 FBXO28Q9NVF7 368 aa33.07■■■□□ 2.88
VEGFA-211ENST00000476772 DCAF8L1A6NGE4 600 aa33.06■■■□□ 2.88
VEGFA-211ENST00000476772 KIFC2Q96AC6 838 aa33.06■■■□□ 2.88
VEGFA-211ENST00000476772 CSADQ9Y600 493 aa33.06■■■□□ 2.88
VEGFA-211ENST00000476772 MAP1SQ66K74 1059 aaPredicted RBP33.05■■■□□ 2.88
VEGFA-211ENST00000476772 ZBTB4Q9P1Z0 1013 aaPredicted RBP33.05■■■□□ 2.88
VEGFA-211ENST00000476772 VCAM1P19320 739 aa33.04■■■□□ 2.88
VEGFA-211ENST00000476772 MOB2Q70IA6 237 aa33.04■■■□□ 2.88
VEGFA-211ENST00000476772 ATP2B1P20020 1258 aa33.04■■■□□ 2.88
VEGFA-211ENST00000476772 ADCY7P51828 1080 aa33.04■■■□□ 2.88
VEGFA-211ENST00000476772 TTLL12Q14166 644 aaPredicted RBP33.04■■■□□ 2.88
VEGFA-211ENST00000476772 PTPAQ15257 358 aa33.04■■■□□ 2.88
VEGFA-211ENST00000476772 KCNG4Q8TDN1 519 aa33.04■■■□□ 2.88
VEGFA-211ENST00000476772 AMNQ9BXJ7 453 aa33.04■■■□□ 2.88
VEGFA-211ENST00000476772 NOL7Q9UMY1 257 aaKnown RBP33.04■■■□□ 2.88
VEGFA-211ENST00000476772 AFG3L2Q9Y4W6 797 aa33.04■■■□□ 2.88
VEGFA-211ENST00000476772 PCDHB6Q9Y5E3 794 aa33.04■■■□□ 2.88
VEGFA-211ENST00000476772 PCDHA1Q9Y5I3 950 aa33.04■■■□□ 2.88
VEGFA-211ENST00000476772 SPTLC2O15270 562 aa33.03■■■□□ 2.88
VEGFA-211ENST00000476772 SLC39A14Q15043 492 aa33.03■■■□□ 2.88
VEGFA-211ENST00000476772 FBXO11Q86XK2 927 aa33.03■■■□□ 2.88
VEGFA-211ENST00000476772 GOLGA6L4A6NEF3 574 aa33.02■■■□□ 2.88
VEGFA-211ENST00000476772 SAMD1Q6SPF0 538 aaPredicted RBP33.02■■■□□ 2.88
VEGFA-211ENST00000476772 BICD2Q8TD16 824 aa33.02■■■□□ 2.88
VEGFA-211ENST00000476772 RANBP17Q9H2T7 1088 aaKnown RBP33.02■■■□□ 2.88
VEGFA-211ENST00000476772 CCDC194A0A1B0GVG4 234 aa33.01■■■□□ 2.88
VEGFA-211ENST00000476772 ME1P48163 572 aa33.01■■■□□ 2.88
VEGFA-211ENST00000476772 HMGCS2P54868 508 aa33.01■■■□□ 2.88
VEGFA-211ENST00000476772 TANGO6Q9C0B7 1094 aa33.01■■■□□ 2.88
VEGFA-211ENST00000476772 GZF1Q9H116 711 aaPredicted RBP33.01■■■□□ 2.88
VEGFA-211ENST00000476772 RIC8AQ9NPQ8 531 aa33.01■■■□□ 2.88
VEGFA-211ENST00000476772 C19orf81C9J6K1 198 aa33.01■■■□□ 2.87
VEGFA-211ENST00000476772 WNT7AO00755 349 aa33.01■■■□□ 2.87
VEGFA-211ENST00000476772 MAP3K11Q16584 847 aa33.01■■■□□ 2.87
VEGFA-211ENST00000476772 CAVIN1Q6NZI2 390 aaKnown RBP33.01■■■□□ 2.87
VEGFA-211ENST00000476772 ANKRD13AQ8IZ07 590 aa33.01■■■□□ 2.87
VEGFA-211ENST00000476772 REXO1Q8N1G1 1221 aaKnown RBP33.01■■■□□ 2.87
VEGFA-211ENST00000476772 C12orf42Q96LP6 360 aa33.01■■■□□ 2.87
VEGFA-211ENST00000476772 RPAP3Q9H6T3 665 aaPredicted RBP33.01■■■□□ 2.87
VEGFA-211ENST00000476772 PCDHA7Q9UN72 937 aa33.01■■■□□ 2.87
VEGFA-211ENST00000476772 TRAF5O00463 557 aa33■■■□□ 2.87
VEGFA-211ENST00000476772 USH1GQ495M9 461 aa33■■■□□ 2.87
VEGFA-211ENST00000476772 CNKSR2Q8WXI2 1034 aa33■■■□□ 2.87
VEGFA-211ENST00000476772 SLF1Q9BQI6 1058 aa33■■■□□ 2.87
VEGFA-211ENST00000476772 ELP3Q9H9T3 547 aa33■■■□□ 2.87
VEGFA-211ENST00000476772 BIN2Q9UBW5 565 aaPredicted RBP33■■■□□ 2.87
VEGFA-211ENST00000476772 TAL1P17542 331 aaPredicted RBP32.99■■■□□ 2.87
VEGFA-211ENST00000476772 CUL5Q93034 780 aa32.99■■■□□ 2.87
VEGFA-211ENST00000476772 CLMNQ96JQ2 1002 aa32.99■■■□□ 2.87
VEGFA-211ENST00000476772 TRAPPC10P48553 1259 aa32.98■■■□□ 2.87
VEGFA-211ENST00000476772 TTC38Q5R3I4 469 aa32.98■■■□□ 2.87
VEGFA-211ENST00000476772 CCDC174Q6PII3 467 aa32.98■■■□□ 2.87
VEGFA-211ENST00000476772 KRT25Q7Z3Z0 450 aa32.98■■■□□ 2.87
VEGFA-211ENST00000476772 NMRK2Q9NPI5 230 aa32.98■■■□□ 2.87
VEGFA-211ENST00000476772 EIF4ENIF1Q9NRA8 985 aaKnown RBP32.98■■■□□ 2.87
VEGFA-211ENST00000476772 TMEM260Q9NX78 707 aa32.98■■■□□ 2.87
VEGFA-211ENST00000476772 MARCKSP29966 332 aaPredicted RBP32.97■■■□□ 2.87
VEGFA-211ENST00000476772 FMR1Q06787 632 aaKnown RBP eCLIP32.97■■■□□ 2.87
VEGFA-211ENST00000476772 JAKMIP3Q5VZ66 844 aa32.97■■■□□ 2.87
VEGFA-211ENST00000476772 ARMC9Q7Z3E5 817 aa32.97■■■□□ 2.87
VEGFA-211ENST00000476772 LDHDQ86WU2 507 aa32.97■■■□□ 2.87
VEGFA-211ENST00000476772 PRPF38AQ8NAV1 312 aaKnown RBP32.97■■■□□ 2.87
VEGFA-211ENST00000476772 PSTPIP2Q9H939 334 aa32.97■■■□□ 2.87
VEGFA-211ENST00000476772 PPP6R2O75170 966 aa32.97■■■□□ 2.87
VEGFA-211ENST00000476772 ZNF526Q8TF50 670 aaPredicted RBP32.97■■■□□ 2.87
VEGFA-211ENST00000476772 PTPRFP10586 1907 aa32.96■■■□□ 2.87
VEGFA-211ENST00000476772 PARP14Q460N5 1801 aa32.96■■■□□ 2.87
VEGFA-211ENST00000476772 FLOT1O75955 427 aa32.96■■■□□ 2.87
VEGFA-211ENST00000476772 MRPL12P52815 198 aaKnown RBP32.96■■■□□ 2.87
VEGFA-211ENST00000476772 UBE2SQ16763 222 aa32.96■■■□□ 2.87
VEGFA-211ENST00000476772 INF2Q27J81 1249 aa32.96■■■□□ 2.87
VEGFA-211ENST00000476772 TMOD4Q9NZQ9 345 aa32.96■■■□□ 2.87
VEGFA-211ENST00000476772 CEP131Q9UPN4 1083 aa32.96■■■□□ 2.87
VEGFA-211ENST00000476772 NONOQ15233 471 aaKnown RBP eCLIP32.95■■■□□ 2.879e-8■■■■□ 26.1
VEGFA-211ENST00000476772 RBM46Q8TBY0 533 aaKnown RBP32.95■■■□□ 2.87
VEGFA-211ENST00000476772 ZNF408Q9H9D4 720 aa32.95■■■□□ 2.87
VEGFA-211ENST00000476772 TMEM63CQ9P1W3 806 aa32.95■■■□□ 2.87
VEGFA-211ENST00000476772 LIG1P18858 919 aa32.94■■■□□ 2.86
VEGFA-211ENST00000476772 CLK2P49760 499 aaKnown RBP32.94■■■□□ 2.86
VEGFA-211ENST00000476772 ZNF174Q15697 407 aa32.94■■■□□ 2.86
VEGFA-211ENST00000476772 SH3D19Q5HYK7 790 aa32.94■■■□□ 2.86
VEGFA-211ENST00000476772 JMYQ8N9B5 988 aa32.94■■■□□ 2.86
VEGFA-211ENST00000476772 PPP1R9AQ9ULJ8 1098 aa32.94■■■□□ 2.86
VEGFA-211ENST00000476772 ADALQ6DHV7 355 aa32.94■■■□□ 2.86
VEGFA-211ENST00000476772 ERO1BQ86YB8 467 aa32.94■■■□□ 2.86
VEGFA-211ENST00000476772 GLT8D2Q9H1C3 349 aa32.94■■■□□ 2.86
VEGFA-211ENST00000476772 SMCHD1A6NHR9 2005 aa32.93■■■□□ 2.86
VEGFA-211ENST00000476772 PPATQ06203 517 aa32.93■■■□□ 2.86
VEGFA-211ENST00000476772 OTUD5Q96G74 571 aa32.93■■■□□ 2.86
VEGFA-211ENST00000476772 SPDYE5A6NIY4 337 aa32.92■■■□□ 2.86
Retrieved 100 of 20,778 RNA–protein pairs in 12 ms