RNA–Protein interactions for RNA: ENST00000475955.1

SEMA3C-208, Transcript of semaphorin 3C, humanhuman

TSL 4

Gene SEMA3C, Length 383 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3C-208ENST00000475955 FAM13BQ9NYF5 915 aa11.11□□□□□ -0.63
SEMA3C-208ENST00000475955 U3KPZ7 1027 aaPredicted RBP11.11□□□□□ -0.63
SEMA3C-208ENST00000475955 MYH15Q9Y2K3 1946 aa11.11□□□□□ -0.63
SEMA3C-208ENST00000475955 LAMA4Q16363 1823 aa11.1□□□□□ -0.63
SEMA3C-208ENST00000475955 VPS37CA5D8V6 355 aaPredicted RBP11.1□□□□□ -0.63
SEMA3C-208ENST00000475955 CTAGE5O15320 804 aa11.1□□□□□ -0.63
SEMA3C-208ENST00000475955 SGPL1O95470 568 aa11.1□□□□□ -0.63
SEMA3C-208ENST00000475955 HMGB1P09429 215 aaKnown RBP11.1□□□□□ -0.63
SEMA3C-208ENST00000475955 RPS6KB1P23443 525 aa11.1□□□□□ -0.63
SEMA3C-208ENST00000475955 DSG3P32926 999 aa11.1□□□□□ -0.63
SEMA3C-208ENST00000475955 ATP2B2Q01814 1243 aa11.1□□□□□ -0.63
SEMA3C-208ENST00000475955 PPARAQ07869 468 aa11.1□□□□□ -0.63
SEMA3C-208ENST00000475955 LRRFIP1Q32MZ4 808 aaKnown RBP11.1□□□□□ -0.63
SEMA3C-208ENST00000475955 SMAP1Q8IYB5 467 aaPredicted RBP11.1□□□□□ -0.63
SEMA3C-208ENST00000475955 U2AF1L4Q8WU68 220 aaKnown RBP11.1□□□□□ -0.63
SEMA3C-208ENST00000475955 LPAR1Q92633 364 aa11.1□□□□□ -0.63
SEMA3C-208ENST00000475955 ATG4CQ96DT6 458 aa11.1□□□□□ -0.63
SEMA3C-208ENST00000475955 NUDT12Q9BQG2 462 aa11.1□□□□□ -0.63
SEMA3C-208ENST00000475955 LLPHQ9BRT6 129 aaKnown RBP11.1□□□□□ -0.63
SEMA3C-208ENST00000475955 MOV10L1Q9BXT6 1211 aaKnown RBP11.1□□□□□ -0.63
SEMA3C-208ENST00000475955 MKNK2Q9HBH9 465 aa11.1□□□□□ -0.63
SEMA3C-208ENST00000475955 FLRT1Q9NZU1 646 aa11.1□□□□□ -0.63
SEMA3C-208ENST00000475955 CFAP45Q9UL16 551 aa11.1□□□□□ -0.63
SEMA3C-208ENST00000475955 ADAMTS5Q9UNA0 930 aa11.1□□□□□ -0.63
SEMA3C-208ENST00000475955 MCM3APO60318 1980 aa11.1□□□□□ -0.63
SEMA3C-208ENST00000475955 SLC27A2O14975 620 aa11.09□□□□□ -0.63
SEMA3C-208ENST00000475955 WDR46O15213 610 aaKnown RBP11.09□□□□□ -0.63
SEMA3C-208ENST00000475955 NEMFO60524 1076 aa11.09□□□□□ -0.63
SEMA3C-208ENST00000475955 FLOT1O75955 427 aa11.09□□□□□ -0.63
SEMA3C-208ENST00000475955 HMGCRP04035 888 aa11.09□□□□□ -0.63
SEMA3C-208ENST00000475955 XRCC5P13010 732 aaKnown RBP11.09□□□□□ -0.63
SEMA3C-208ENST00000475955 PTPREP23469 700 aa11.09□□□□□ -0.63
SEMA3C-208ENST00000475955 DNM1Q05193 864 aaKnown RBP11.09□□□□□ -0.63
SEMA3C-208ENST00000475955 CTDSPL2Q05D32 466 aa11.09□□□□□ -0.63
SEMA3C-208ENST00000475955 NMIQ13287 307 aaPredicted RBP11.09□□□□□ -0.63
SEMA3C-208ENST00000475955 SYCP1Q15431 976 aa11.09□□□□□ -0.63
SEMA3C-208ENST00000475955 FAM47AQ5JRC9 791 aa11.09□□□□□ -0.63
SEMA3C-208ENST00000475955 MAP3K21Q5TCX8 1036 aa11.09□□□□□ -0.63
SEMA3C-208ENST00000475955 PRPF38BQ5VTL8 546 aaKnown RBP11.09□□□□□ -0.63
SEMA3C-208ENST00000475955 ZNF589Q86UQ0 364 aaPredicted RBP11.09□□□□□ -0.63
SEMA3C-208ENST00000475955 NKX2-3Q8TAU0 364 aa11.09□□□□□ -0.63
SEMA3C-208ENST00000475955 CEP95Q96GE4 821 aa11.09□□□□□ -0.63
SEMA3C-208ENST00000475955 DEFB118Q96PH6 123 aa11.09□□□□□ -0.63
SEMA3C-208ENST00000475955 NUP88Q99567 741 aaPredicted RBP11.09□□□□□ -0.63
SEMA3C-208ENST00000475955 CRISPLD2Q9H0B8 497 aa11.09□□□□□ -0.63
SEMA3C-208ENST00000475955 XRN2Q9H0D6 950 aaKnown RBP eCLIP11.09□□□□□ -0.63
SEMA3C-208ENST00000475955 NAPBQ9H115 298 aa11.09□□□□□ -0.63
SEMA3C-208ENST00000475955 IL25Q9H293 177 aa11.09□□□□□ -0.63
SEMA3C-208ENST00000475955 HELLSQ9NRZ9 838 aa11.09□□□□□ -0.63
SEMA3C-208ENST00000475955 HOXC10Q9NYD6 342 aa11.09□□□□□ -0.63
SEMA3C-208ENST00000475955 NYAP2Q9P242 653 aa11.09□□□□□ -0.63
SEMA3C-208ENST00000475955 DDX52Q9Y2R4 599 aaKnown RBP eCLIP11.09□□□□□ -0.63
SEMA3C-208ENST00000475955 PLIN4Q96Q06 1357 aa11.08□□□□□ -0.64
SEMA3C-208ENST00000475955 IGHA2P01877 340 aa11.08□□□□□ -0.64
SEMA3C-208ENST00000475955 CDC25BP30305 580 aa11.08□□□□□ -0.64
SEMA3C-208ENST00000475955 MNX1P50219 401 aaPredicted RBP11.08□□□□□ -0.64
SEMA3C-208ENST00000475955 PTH1RQ03431 593 aa11.08□□□□□ -0.64
SEMA3C-208ENST00000475955 CACNB2Q08289 660 aaPredicted RBP11.08□□□□□ -0.64
SEMA3C-208ENST00000475955 MAP2K5Q13163 448 aa11.08□□□□□ -0.64
SEMA3C-208ENST00000475955 GRB14Q14449 540 aa11.08□□□□□ -0.64
SEMA3C-208ENST00000475955 TMEM132BQ14DG7 1078 aa11.08□□□□□ -0.64
SEMA3C-208ENST00000475955 ME3Q16798 604 aa11.08□□□□□ -0.64
SEMA3C-208ENST00000475955 FAM83BQ5T0W9 1011 aa11.08□□□□□ -0.64
SEMA3C-208ENST00000475955 RBM43Q6ZSC3 357 aaKnown RBP11.08□□□□□ -0.64
SEMA3C-208ENST00000475955 REPS2Q8NFH8 660 aa11.08□□□□□ -0.64
SEMA3C-208ENST00000475955 NPLOC4Q8TAT6 608 aa11.08□□□□□ -0.64
SEMA3C-208ENST00000475955 KIAA1524Q8TCG1 905 aa11.08□□□□□ -0.64
SEMA3C-208ENST00000475955 SOCS4Q8WXH5 440 aa11.08□□□□□ -0.64
SEMA3C-208ENST00000475955 CHAMP1Q96JM3 812 aa11.08□□□□□ -0.64
SEMA3C-208ENST00000475955 SPATA32Q96LK8 384 aa11.08□□□□□ -0.64
SEMA3C-208ENST00000475955 CCDC94Q9BW85 323 aaPredicted RBP11.08□□□□□ -0.64
SEMA3C-208ENST00000475955 NACAP1Q9BZK3 213 aa11.08□□□□□ -0.64
SEMA3C-208ENST00000475955 SPATC1LQ9H0A9 340 aa11.08□□□□□ -0.64
SEMA3C-208ENST00000475955 TNMDQ9H2S6 317 aa11.08□□□□□ -0.64
SEMA3C-208ENST00000475955 SH2D4AQ9H788 454 aa11.08□□□□□ -0.64
SEMA3C-208ENST00000475955 MTMR4Q9NYA4 1195 aa11.08□□□□□ -0.64
SEMA3C-208ENST00000475955 CLIP2Q9UDT6 1046 aa11.08□□□□□ -0.64
SEMA3C-208ENST00000475955 SLC15A5A6NIM6 579 aa11.07□□□□□ -0.64
SEMA3C-208ENST00000475955 F5H6K3 240 aa11.07□□□□□ -0.64
SEMA3C-208ENST00000475955 NDUFB10O96000 172 aa11.07□□□□□ -0.64
SEMA3C-208ENST00000475955 PRKAR2AP13861 404 aaKnown RBP11.07□□□□□ -0.64
SEMA3C-208ENST00000475955 ERCC3P19447 782 aa11.07□□□□□ -0.64
SEMA3C-208ENST00000475955 CCND3P30281 292 aaPredicted RBP11.07□□□□□ -0.64
SEMA3C-208ENST00000475955 RGS2P41220 211 aa11.07□□□□□ -0.64
SEMA3C-208ENST00000475955 CCNA1P78396 465 aa11.07□□□□□ -0.64
SEMA3C-208ENST00000475955 TYRO3Q06418 890 aa11.07□□□□□ -0.64
SEMA3C-208ENST00000475955 KLRC3Q07444 240 aa11.07□□□□□ -0.64
SEMA3C-208ENST00000475955 ALX1Q15699 326 aa11.07□□□□□ -0.64
SEMA3C-208ENST00000475955 FOXD4L6Q3SYB3 417 aaPredicted RBP11.07□□□□□ -0.64
SEMA3C-208ENST00000475955 MCMDC2Q4G0Z9 681 aa11.07□□□□□ -0.64
SEMA3C-208ENST00000475955 WDR78Q5VTH9 848 aa11.07□□□□□ -0.64
SEMA3C-208ENST00000475955 SAMD1Q6SPF0 538 aaPredicted RBP11.07□□□□□ -0.64
SEMA3C-208ENST00000475955 FOXD4L3Q6VB84 417 aaPredicted RBP11.07□□□□□ -0.64
SEMA3C-208ENST00000475955 CCAR1Q8IX12 1150 aaKnown RBP11.07□□□□□ -0.64
SEMA3C-208ENST00000475955 ZNF444Q8N0Y2 327 aaPredicted RBP11.07□□□□□ -0.64
SEMA3C-208ENST00000475955 LRRC47Q8N1G4 583 aaKnown RBP11.07□□□□□ -0.64
SEMA3C-208ENST00000475955 NEDD1Q8NHV4 660 aa11.07□□□□□ -0.64
SEMA3C-208ENST00000475955 DIS3LQ8TF46 1054 aaKnown RBP11.07□□□□□ -0.64
SEMA3C-208ENST00000475955 MKL1Q969V6 931 aa11.07□□□□□ -0.64
SEMA3C-208ENST00000475955 APBA2Q99767 749 aa11.07□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms