RNA–Protein interactions for RNA: ENST00000475728.5

ABCF3-211, Transcript of ATP binding cassette subfamily F member 3, humanhuman

TSL 3

Gene ABCF3, Length 503 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCF3-211ENST00000475728 ACAD9Q9H845 621 aa16.87■□□□□ 0.29
ABCF3-211ENST00000475728 HMX1Q9NP08 348 aaPredicted RBP16.87■□□□□ 0.29
ABCF3-211ENST00000475728 CCPG1Q9ULG6 757 aa16.87■□□□□ 0.29
ABCF3-211ENST00000475728 DIS3Q9Y2L1 958 aaKnown RBP16.87■□□□□ 0.29
ABCF3-211ENST00000475728 ZNF236Q9UL36 1845 aa16.86■□□□□ 0.29
ABCF3-211ENST00000475728 FXR1P51114 621 aaKnown RBP eCLIP16.86■□□□□ 0.29
ABCF3-211ENST00000475728 ANTXR2P58335 489 aa16.86■□□□□ 0.29
ABCF3-211ENST00000475728 MTFR1Q15390 333 aa16.86■□□□□ 0.29
ABCF3-211ENST00000475728 CCDC174Q6PII3 467 aa16.86■□□□□ 0.29
ABCF3-211ENST00000475728 IGDCC4Q8TDY8 1250 aa16.86■□□□□ 0.29
ABCF3-211ENST00000475728 RNF146Q9NTX7 359 aa16.86■□□□□ 0.29
ABCF3-211ENST00000475728 RIPK3Q9Y572 518 aa16.86■□□□□ 0.29
ABCF3-211ENST00000475728 RPTORQ8N122 1335 aa16.86■□□□□ 0.29
ABCF3-211ENST00000475728 WDR19Q8NEZ3 1342 aa16.86■□□□□ 0.29
ABCF3-211ENST00000475728 GOLGA8HP0CJ92 632 aa16.85■□□□□ 0.29
ABCF3-211ENST00000475728 ALAS1P13196 640 aa16.85■□□□□ 0.29
ABCF3-211ENST00000475728 PRKAR2AP13861 404 aaKnown RBP16.85■□□□□ 0.29
ABCF3-211ENST00000475728 HSPA4P34932 840 aa16.85■□□□□ 0.29
ABCF3-211ENST00000475728 LIFRP42702 1097 aa16.85■□□□□ 0.29
ABCF3-211ENST00000475728 MAP3K21Q5TCX8 1036 aa16.85■□□□□ 0.29
ABCF3-211ENST00000475728 NFXL1Q6ZNB6 911 aa16.85■□□□□ 0.29
ABCF3-211ENST00000475728 CHST3Q7LGC8 479 aa16.85■□□□□ 0.29
ABCF3-211ENST00000475728 ANKRD35Q8N283 1001 aa16.85■□□□□ 0.29
ABCF3-211ENST00000475728 AGBL1Q96MI9 1066 aa16.85■□□□□ 0.29
ABCF3-211ENST00000475728 MAP3K14Q99558 947 aa16.85■□□□□ 0.29
ABCF3-211ENST00000475728 UNC93B1Q9H1C4 597 aa16.85■□□□□ 0.29
ABCF3-211ENST00000475728 ZNF536O15090 1300 aa16.85■□□□□ 0.29
ABCF3-211ENST00000475728 DOCK3Q8IZD9 2030 aa16.85■□□□□ 0.29
ABCF3-211ENST00000475728 CCDC69A6NI79 296 aa16.84■□□□□ 0.29
ABCF3-211ENST00000475728 DHX16O60231 1041 aaKnown RBP16.84■□□□□ 0.29
ABCF3-211ENST00000475728 COBLO75128 1261 aa16.84■□□□□ 0.29
ABCF3-211ENST00000475728 DDAH1O94760 285 aa16.84■□□□□ 0.29
ABCF3-211ENST00000475728 KIF5BP33176 963 aa16.84■□□□□ 0.29
ABCF3-211ENST00000475728 TRAF1Q13077 416 aa16.84■□□□□ 0.29
ABCF3-211ENST00000475728 CCL14Q16627 93 aa16.84■□□□□ 0.29
ABCF3-211ENST00000475728 DHX32Q7L7V1 743 aaKnown RBP16.84■□□□□ 0.29
ABCF3-211ENST00000475728 MSL3Q8N5Y2 521 aaKnown RBP16.84■□□□□ 0.29
ABCF3-211ENST00000475728 NPLOC4Q8TAT6 608 aa16.84■□□□□ 0.29
ABCF3-211ENST00000475728 KCNB2Q92953 911 aa16.84■□□□□ 0.29
ABCF3-211ENST00000475728 TRERF1Q96PN7 1200 aa16.84■□□□□ 0.29
ABCF3-211ENST00000475728 XRN2Q9H0D6 950 aaKnown RBP eCLIP16.84■□□□□ 0.299e-6■■■■■ 32.4
ABCF3-211ENST00000475728 LY9Q9HBG7 655 aa16.84■□□□□ 0.29
ABCF3-211ENST00000475728 PAK6Q9NQU5 681 aaPredicted RBP16.84■□□□□ 0.29
ABCF3-211ENST00000475728 HOMER2Q9NSB8 354 aa16.84■□□□□ 0.29
ABCF3-211ENST00000475728 PFASO15067 1338 aa16.84■□□□□ 0.29
ABCF3-211ENST00000475728 PLXNB2O15031 1838 aa16.84■□□□□ 0.29
ABCF3-211ENST00000475728 POTEFA5A3E0 1075 aa16.83■□□□□ 0.28
ABCF3-211ENST00000475728 KLRF2D3W0D1 207 aa16.83■□□□□ 0.28
ABCF3-211ENST00000475728 SH2B2O14492 632 aaPredicted RBP16.83■□□□□ 0.28
ABCF3-211ENST00000475728 CALM1P0DP23 149 aa16.83■□□□□ 0.28
ABCF3-211ENST00000475728 CALM2P0DP24 149 aa16.83■□□□□ 0.28
ABCF3-211ENST00000475728 CALM3P0DP25 149 aa16.83■□□□□ 0.28
ABCF3-211ENST00000475728 COL11A1P12107 1806 aaPredicted RBP16.83■□□□□ 0.28
ABCF3-211ENST00000475728 GJA8P48165 433 aa16.83■□□□□ 0.28
ABCF3-211ENST00000475728 SNAP25P60880 206 aa16.83■□□□□ 0.28
ABCF3-211ENST00000475728 CACNB2Q08289 660 aaPredicted RBP16.83■□□□□ 0.28
ABCF3-211ENST00000475728 TROAPQ12815 778 aa16.83■□□□□ 0.28
ABCF3-211ENST00000475728 GRM4Q14833 912 aa16.83■□□□□ 0.28
ABCF3-211ENST00000475728 ZNF792Q3KQV3 632 aa16.83■□□□□ 0.28
ABCF3-211ENST00000475728 SYNE3Q6ZMZ3 975 aa16.83■□□□□ 0.28
ABCF3-211ENST00000475728 RASEFQ8IZ41 740 aa16.83■□□□□ 0.28
ABCF3-211ENST00000475728 CTCFLQ8NI51 663 aaPredicted RBP16.83■□□□□ 0.28
ABCF3-211ENST00000475728 MAML3Q96JK9 1138 aa16.83■□□□□ 0.28
ABCF3-211ENST00000475728 UBA5Q9GZZ9 404 aa16.83■□□□□ 0.28
ABCF3-211ENST00000475728 NRBP1Q9UHY1 535 aa16.83■□□□□ 0.28
ABCF3-211ENST00000475728 DNAJC25-GNG10A0A024R161 153 aa16.82■□□□□ 0.28
ABCF3-211ENST00000475728 PALM3A6NDB9 673 aaPredicted RBP16.82■□□□□ 0.28
ABCF3-211ENST00000475728 PGK2P07205 417 aa16.82■□□□□ 0.28
ABCF3-211ENST00000475728 PSMA5P28066 241 aa16.82■□□□□ 0.28
ABCF3-211ENST00000475728 GNAQP50148 359 aa16.82■□□□□ 0.28
ABCF3-211ENST00000475728 ZNF467Q7Z7K2 595 aaPredicted RBP16.82■□□□□ 0.28
ABCF3-211ENST00000475728 ADGRF4Q8IZF3 695 aa16.82■□□□□ 0.28
ABCF3-211ENST00000475728 ZNF654Q8IZM8 581 aa16.82■□□□□ 0.28
ABCF3-211ENST00000475728 U2AF1L4Q8WU68 220 aaKnown RBP16.82■□□□□ 0.28
ABCF3-211ENST00000475728 MAF1Q9H063 256 aa16.82■□□□□ 0.28
ABCF3-211ENST00000475728 FLRT1Q9NZU1 646 aa16.82■□□□□ 0.28
ABCF3-211ENST00000475728 MAD2L2Q9UI95 211 aa16.82■□□□□ 0.28
ABCF3-211ENST00000475728 MKI67P46013 3256 aaKnown RBP16.82■□□□□ 0.28
ABCF3-211ENST00000475728 KIAA0100Q14667 2235 aaKnown RBP16.81■□□□□ 0.28
ABCF3-211ENST00000475728 POTEB2H3BUK9 544 aa16.81■□□□□ 0.28
ABCF3-211ENST00000475728 MSCO60682 206 aa16.81■□□□□ 0.28
ABCF3-211ENST00000475728 SGPL1O95470 568 aa16.81■□□□□ 0.28
ABCF3-211ENST00000475728 EN2P19622 333 aaPredicted RBP16.81■□□□□ 0.28
ABCF3-211ENST00000475728 CYP2C19P33261 490 aa16.81■□□□□ 0.28
ABCF3-211ENST00000475728 TRIM32Q13049 653 aa16.81■□□□□ 0.28
ABCF3-211ENST00000475728 CDC37Q16543 378 aaPredicted RBP16.81■□□□□ 0.28
ABCF3-211ENST00000475728 DEFB118Q96PH6 123 aa16.81■□□□□ 0.28
ABCF3-211ENST00000475728 LZTS2Q9BRK4 669 aa16.81■□□□□ 0.28
ABCF3-211ENST00000475728 SNX14Q9Y5W7 946 aa16.81■□□□□ 0.28
ABCF3-211ENST00000475728 SLC12A7Q9Y666 1083 aa16.81■□□□□ 0.28
ABCF3-211ENST00000475728 RBBP6Q7Z6E9 1792 aaKnown RBP16.8■□□□□ 0.28
ABCF3-211ENST00000475728 IGHA2P01877 340 aa16.8■□□□□ 0.28
ABCF3-211ENST00000475728 TFRCP02786 760 aaKnown RBP16.8■□□□□ 0.28
ABCF3-211ENST00000475728 FGD1P98174 961 aa16.8■□□□□ 0.28
ABCF3-211ENST00000475728 EXOSC10Q01780 885 aaKnown RBP16.8■□□□□ 0.28
ABCF3-211ENST00000475728 BLOC1S2Q6QNY1 142 aa16.8■□□□□ 0.28
ABCF3-211ENST00000475728 SGMS1Q86VZ5 419 aa16.8■□□□□ 0.28
ABCF3-211ENST00000475728 STAG2Q8N3U4 1231 aa16.8■□□□□ 0.28
ABCF3-211ENST00000475728 NUP133Q8WUM0 1156 aa16.8■□□□□ 0.28
ABCF3-211ENST00000475728 JAKMIP1Q96N16 626 aaKnown RBP16.8■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms