RNA–Protein interactions for RNA: ENST00000475558.5

SHQ1-207, Transcript of SHQ1, H/ACA ribonucleoprotein assembly factor, humanhuman

TSL 5

Gene SHQ1, Length 666 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHQ1-207ENST00000475558 BMP8BP34820 402 aa8.14□□□□□ -1.11
SHQ1-207ENST00000475558 DDIT3P35638 169 aa8.14□□□□□ -1.11
SHQ1-207ENST00000475558 ANTXR2P58335 489 aa8.14□□□□□ -1.11
SHQ1-207ENST00000475558 SSRP1Q08945 709 aaKnown RBP8.14□□□□□ -1.11
SHQ1-207ENST00000475558 APOBRQ0VD83 1088 aa8.14□□□□□ -1.11
SHQ1-207ENST00000475558 SEC23AQ15436 765 aa8.14□□□□□ -1.11
SHQ1-207ENST00000475558 CSPP1Q1MSJ5 1256 aa8.14□□□□□ -1.11
SHQ1-207ENST00000475558 ATL3Q6DD88 541 aa8.14□□□□□ -1.11
SHQ1-207ENST00000475558 APOA5Q6Q788 366 aa8.14□□□□□ -1.11
SHQ1-207ENST00000475558 CLEC17AQ6ZS10 378 aa8.14□□□□□ -1.11
SHQ1-207ENST00000475558 TMEM179Q6ZVK1 233 aa8.14□□□□□ -1.11
SHQ1-207ENST00000475558 NECAB2Q7Z6G3 386 aa8.14□□□□□ -1.11
SHQ1-207ENST00000475558 SMARCC2Q8TAQ2 1214 aa8.14□□□□□ -1.11
SHQ1-207ENST00000475558 DEFB118Q96PH6 123 aa8.14□□□□□ -1.11
SHQ1-207ENST00000475558 CRISPLD2Q9H0B8 497 aa8.14□□□□□ -1.11
SHQ1-207ENST00000475558 ZSCAN16Q9H4T2 348 aaPredicted RBP8.14□□□□□ -1.11
SHQ1-207ENST00000475558 PICK1Q9NRD5 415 aa8.14□□□□□ -1.11
SHQ1-207ENST00000475558 NYAP2Q9P242 653 aa8.14□□□□□ -1.11
SHQ1-207ENST00000475558 SAP30BPQ9UHR5 308 aaKnown RBP8.14□□□□□ -1.11
SHQ1-207ENST00000475558 TAF6LQ9Y6J9 622 aa8.14□□□□□ -1.11
SHQ1-207ENST00000475558 ZHX2Q9Y6X8 837 aa8.14□□□□□ -1.11
SHQ1-207ENST00000475558 A0A0C4DFX4 3053 aa8.14□□□□□ -1.11
SHQ1-207ENST00000475558 NEDD4P46934 1319 aa8.13□□□□□ -1.11
SHQ1-207ENST00000475558 A0A0G2JLL6 359 aaPredicted RBP8.13□□□□□ -1.11
SHQ1-207ENST00000475558 GOLGA8AA7E2F4 631 aa8.13□□□□□ -1.11
SHQ1-207ENST00000475558 GOLGA8BA8MQT2 603 aa8.13□□□□□ -1.11
SHQ1-207ENST00000475558 H3BQV1 296 aa8.13□□□□□ -1.11
SHQ1-207ENST00000475558 SOX1O00570 391 aaPredicted RBP8.13□□□□□ -1.11
SHQ1-207ENST00000475558 ELNP15502 786 aa8.13□□□□□ -1.11
SHQ1-207ENST00000475558 GJB2P29033 226 aa8.13□□□□□ -1.11
SHQ1-207ENST00000475558 SCRN1Q12765 414 aa8.13□□□□□ -1.11
SHQ1-207ENST00000475558 NFIAQ12857 509 aa8.13□□□□□ -1.11
SHQ1-207ENST00000475558 TRIM29Q14134 588 aa8.13□□□□□ -1.11
SHQ1-207ENST00000475558 RAB3GAP1Q15042 981 aa8.13□□□□□ -1.11
SHQ1-207ENST00000475558 RTN1Q16799 776 aa8.13□□□□□ -1.11
SHQ1-207ENST00000475558 ABCB5Q2M3G0 1257 aa8.13□□□□□ -1.11
SHQ1-207ENST00000475558 GADL1Q6ZQY3 521 aa8.13□□□□□ -1.11
SHQ1-207ENST00000475558 CHST3Q7LGC8 479 aa8.13□□□□□ -1.11
SHQ1-207ENST00000475558 PRRT2Q7Z6L0 340 aaPredicted RBP8.13□□□□□ -1.11
SHQ1-207ENST00000475558 CCDC83Q8IWF9 413 aa8.13□□□□□ -1.11
SHQ1-207ENST00000475558 SCYL3Q8IZE3 742 aa8.13□□□□□ -1.11
SHQ1-207ENST00000475558 ZNF654Q8IZM8 581 aa8.13□□□□□ -1.11
SHQ1-207ENST00000475558 ENAHQ8N8S7 591 aaPredicted RBP8.13□□□□□ -1.11
SHQ1-207ENST00000475558 ANKLE1Q8NAG6 615 aa8.13□□□□□ -1.11
SHQ1-207ENST00000475558 SMCR8Q8TEV9 937 aaPredicted RBP8.13□□□□□ -1.11
SHQ1-207ENST00000475558 COA7Q96BR5 231 aa8.13□□□□□ -1.11
SHQ1-207ENST00000475558 LRCH3Q96II8 777 aa8.13□□□□□ -1.11
SHQ1-207ENST00000475558 PAWRQ96IZ0 340 aaKnown RBP8.13□□□□□ -1.11
SHQ1-207ENST00000475558 XPO5Q9HAV4 1204 aaKnown RBP eCLIP8.13□□□□□ -1.11
SHQ1-207ENST00000475558 DDX4Q9NQI0 724 aaKnown RBP8.13□□□□□ -1.11
SHQ1-207ENST00000475558 PAK6Q9NQU5 681 aaPredicted RBP8.13□□□□□ -1.11
SHQ1-207ENST00000475558 MTMR4Q9NYA4 1195 aa8.13□□□□□ -1.11
SHQ1-207ENST00000475558 PNMA2Q9UL42 364 aa8.13□□□□□ -1.11
SHQ1-207ENST00000475558 STX8Q9UNK0 236 aa8.13□□□□□ -1.11
SHQ1-207ENST00000475558 AFG3L2Q9Y4W6 797 aa8.13□□□□□ -1.11
SHQ1-207ENST00000475558 DOCK3Q8IZD9 2030 aa8.13□□□□□ -1.11
SHQ1-207ENST00000475558 CYP2D7A0A087X1C5 515 aa8.12□□□□□ -1.11
SHQ1-207ENST00000475558 PHF20L1A8MW92 1017 aa8.12□□□□□ -1.11
SHQ1-207ENST00000475558 PRPF3O43395 683 aaKnown RBP8.12□□□□□ -1.11
SHQ1-207ENST00000475558 STX6O43752 255 aa8.12□□□□□ -1.11
SHQ1-207ENST00000475558 CTNND1O60716 968 aaKnown RBP8.12□□□□□ -1.11
SHQ1-207ENST00000475558 PRDM1O75626 825 aa8.12□□□□□ -1.11
SHQ1-207ENST00000475558 DEXIO95424 95 aa8.12□□□□□ -1.11
SHQ1-207ENST00000475558 ASNSP08243 561 aa8.12□□□□□ -1.11
SHQ1-207ENST00000475558 CYP2D6P10635 497 aa8.12□□□□□ -1.11
SHQ1-207ENST00000475558 PTPRAP18433 802 aa8.12□□□□□ -1.11
SHQ1-207ENST00000475558 TROAPQ12815 778 aa8.12□□□□□ -1.11
SHQ1-207ENST00000475558 SAFBQ15424 915 aaKnown RBP eCLIP8.12□□□□□ -1.11
SHQ1-207ENST00000475558 FAM47AQ5JRC9 791 aa8.12□□□□□ -1.11
SHQ1-207ENST00000475558 GPATCH4Q5T3I0 446 aaKnown RBP8.12□□□□□ -1.11
SHQ1-207ENST00000475558 GALNT17Q6IS24 598 aa8.12□□□□□ -1.11
SHQ1-207ENST00000475558 NOL8Q76FK4 1167 aaKnown RBP8.12□□□□□ -1.11
SHQ1-207ENST00000475558 PNMA1Q8ND90 353 aa8.12□□□□□ -1.11
SHQ1-207ENST00000475558 DYNLL2Q96FJ2 89 aa8.12□□□□□ -1.11
SHQ1-207ENST00000475558 TCEANC2Q96MN5 208 aa8.12□□□□□ -1.11
SHQ1-207ENST00000475558 GDF15Q99988 308 aa8.12□□□□□ -1.11
SHQ1-207ENST00000475558 RNF26Q9BY78 433 aaPredicted RBP8.12□□□□□ -1.11
SHQ1-207ENST00000475558 LRRC2Q9BYS8 371 aa8.12□□□□□ -1.11
SHQ1-207ENST00000475558 INCENPQ9NQS7 918 aa8.12□□□□□ -1.11
SHQ1-207ENST00000475558 IL17RBQ9NRM6 502 aa8.12□□□□□ -1.11
SHQ1-207ENST00000475558 BRPF3Q9ULD4 1205 aa8.12□□□□□ -1.11
SHQ1-207ENST00000475558 COL6A3P12111 3177 aa8.12□□□□□ -1.11
SHQ1-207ENST00000475558 NID2Q14112 1375 aa8.11□□□□□ -1.11
SHQ1-207ENST00000475558 MYH13Q9UKX3 1938 aa8.11□□□□□ -1.11
SHQ1-207ENST00000475558 STK36Q9NRP7 1315 aa8.11□□□□□ -1.11
SHQ1-207ENST00000475558 IGKV6D-41A0A0C4DH26 115 aa8.11□□□□□ -1.11
SHQ1-207ENST00000475558 DDTLA6NHG4 134 aaPredicted RBP8.11□□□□□ -1.11
SHQ1-207ENST00000475558 hCG_1984214I3L0E3 225 aa8.11□□□□□ -1.11
SHQ1-207ENST00000475558 MPHOSPH10O00566 681 aaKnown RBP8.11□□□□□ -1.11
SHQ1-207ENST00000475558 BRD1O95696 1058 aa8.11□□□□□ -1.11
SHQ1-207ENST00000475558 PARP1P09874 1014 aaKnown RBP8.11□□□□□ -1.11
SHQ1-207ENST00000475558 SYT1P21579 422 aa8.11□□□□□ -1.11
SHQ1-207ENST00000475558 SHMT1P34896 483 aa8.11□□□□□ -1.11
SHQ1-207ENST00000475558 CCT2P78371 535 aaKnown RBP8.11□□□□□ -1.11
SHQ1-207ENST00000475558 STK3Q13188 491 aa8.11□□□□□ -1.11
SHQ1-207ENST00000475558 SKOR2Q2VWA4 1001 aaPredicted RBP8.11□□□□□ -1.11
SHQ1-207ENST00000475558 LRIT3Q3SXY7 679 aa8.11□□□□□ -1.11
SHQ1-207ENST00000475558 ASPRV1Q53RT3 343 aa8.11□□□□□ -1.11
SHQ1-207ENST00000475558 DEFB123Q8N688 67 aa8.11□□□□□ -1.11
SHQ1-207ENST00000475558 ZNF713Q8N859 430 aaPredicted RBP8.11□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms