RNA–Protein interactions for RNA: ENST00000474190.1

CASC3-204, Transcript of CASC3, exon junction complex subunit, humanhuman

TSL 3

Gene CASC3, Length 908 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC3-204ENST00000474190 QRICH1Q2TAL8 776 aa12.06□□□□□ -0.48
CASC3-204ENST00000474190 NSUN7Q8NE18 718 aaKnown RBP12.06□□□□□ -0.48
CASC3-204ENST00000474190 SMARCC2Q8TAQ2 1214 aa12.06□□□□□ -0.48
CASC3-204ENST00000474190 CHURC1Q8WUH1 139 aa12.06□□□□□ -0.48
CASC3-204ENST00000474190 AGBL1Q96MI9 1066 aa12.06□□□□□ -0.48
CASC3-204ENST00000474190 PIGSQ96S52 555 aa12.06□□□□□ -0.48
CASC3-204ENST00000474190 PARK7Q99497 189 aaKnown RBP12.06□□□□□ -0.48
CASC3-204ENST00000474190 PORCNQ9H237 461 aa12.06□□□□□ -0.48
CASC3-204ENST00000474190 TSHZ2Q9NRE2 1034 aa12.06□□□□□ -0.48
CASC3-204ENST00000474190 SAGE1Q9NXZ1 904 aa12.06□□□□□ -0.48
CASC3-204ENST00000474190 RABGAP1Q9Y3P9 1069 aa12.06□□□□□ -0.48
CASC3-204ENST00000474190 MYH4Q9Y623 1939 aa12.05□□□□□ -0.48
CASC3-204ENST00000474190 JAK2O60674 1132 aa12.05□□□□□ -0.48
CASC3-204ENST00000474190 ALDH1A1P00352 501 aa12.05□□□□□ -0.48
CASC3-204ENST00000474190 KIF5BP33176 963 aa12.05□□□□□ -0.48
CASC3-204ENST00000474190 SOX10P56693 466 aa12.05□□□□□ -0.48
CASC3-204ENST00000474190 ERVK-9P63128 1117 aa12.05□□□□□ -0.48
CASC3-204ENST00000474190 ERVK-24P63145 666 aa12.05□□□□□ -0.48
CASC3-204ENST00000474190 FGD1P98174 961 aa12.05□□□□□ -0.48
CASC3-204ENST00000474190 PABPC4Q13310 644 aaKnown RBP eCLIP12.05□□□□□ -0.48
CASC3-204ENST00000474190 PPP2R5BQ15173 497 aa12.05□□□□□ -0.48
CASC3-204ENST00000474190 CDC37Q16543 378 aaPredicted RBP12.05□□□□□ -0.48
CASC3-204ENST00000474190 FAM110CQ1W6H9 321 aa12.05□□□□□ -0.48
CASC3-204ENST00000474190 CCDC82Q8N4S0 544 aa12.05□□□□□ -0.48
CASC3-204ENST00000474190 ANKRD13CQ8N6S4 541 aa12.05□□□□□ -0.48
CASC3-204ENST00000474190 IL27Q8NEV9 243 aa12.05□□□□□ -0.48
CASC3-204ENST00000474190 CTCFLQ8NI51 663 aaPredicted RBP12.05□□□□□ -0.48
CASC3-204ENST00000474190 CLEC4DQ8WXI8 215 aa12.05□□□□□ -0.48
CASC3-204ENST00000474190 PHKBQ93100 1093 aa12.05□□□□□ -0.48
CASC3-204ENST00000474190 MOV10L1Q9BXT6 1211 aaKnown RBP12.05□□□□□ -0.48
CASC3-204ENST00000474190 RAVER2Q9HCJ3 691 aaKnown RBP12.05□□□□□ -0.48
CASC3-204ENST00000474190 RBM28Q9NW13 759 aaKnown RBP12.05□□□□□ -0.48
CASC3-204ENST00000474190 PARP14Q460N5 1801 aa12.04□□□□□ -0.48
CASC3-204ENST00000474190 ZBTB5O15062 677 aa12.04□□□□□ -0.48
CASC3-204ENST00000474190 GCLCP48506 637 aaPredicted RBP12.04□□□□□ -0.48
CASC3-204ENST00000474190 NPY5RQ15761 445 aa12.04□□□□□ -0.48
CASC3-204ENST00000474190 NOM1Q5C9Z4 860 aaKnown RBP12.04□□□□□ -0.48
CASC3-204ENST00000474190 DHX30Q7L2E3 1194 aaKnown RBP eCLIP12.04□□□□□ -0.48
CASC3-204ENST00000474190 CCDC83Q8IWF9 413 aa12.04□□□□□ -0.48
CASC3-204ENST00000474190 MB21D1Q8N884 522 aa12.04□□□□□ -0.48
CASC3-204ENST00000474190 AIFM3Q96NN9 605 aa12.04□□□□□ -0.48
CASC3-204ENST00000474190 LZTS2Q9BRK4 669 aa12.04□□□□□ -0.48
CASC3-204ENST00000474190 ARHGAP39Q9C0H5 1083 aa12.04□□□□□ -0.48
CASC3-204ENST00000474190 SPATC1LQ9H0A9 340 aa12.04□□□□□ -0.48
CASC3-204ENST00000474190 SLKQ9H2G2 1235 aaPredicted RBP12.04□□□□□ -0.48
CASC3-204ENST00000474190 ZFYVE28Q9HCC9 887 aa12.04□□□□□ -0.48
CASC3-204ENST00000474190 VAT1LQ9HCJ6 419 aa12.04□□□□□ -0.48
CASC3-204ENST00000474190 PNMA3Q9UL41 463 aa12.04□□□□□ -0.48
CASC3-204ENST00000474190 V9GY48 417 aaPredicted RBP12.04□□□□□ -0.48
CASC3-204ENST00000474190 PNMA6FA0A0J9YX94 578 aa12.03□□□□□ -0.48
CASC3-204ENST00000474190 PRPF3O43395 683 aaKnown RBP12.03□□□□□ -0.48
CASC3-204ENST00000474190 ST18O60284 1047 aa12.03□□□□□ -0.48
CASC3-204ENST00000474190 FMNL1O95466 1100 aaPredicted RBP12.03□□□□□ -0.48
CASC3-204ENST00000474190 IGHA2P01877 340 aa12.03□□□□□ -0.48
CASC3-204ENST00000474190 ICAM1P05362 532 aa12.03□□□□□ -0.48
CASC3-204ENST00000474190 GNAQP50148 359 aa12.03□□□□□ -0.48
CASC3-204ENST00000474190 OAZ1P54368 228 aa12.03□□□□□ -0.48
CASC3-204ENST00000474190 MUM1L1Q5H9M0 696 aa12.03□□□□□ -0.48
CASC3-204ENST00000474190 PRPF38BQ5VTL8 546 aaKnown RBP12.03□□□□□ -0.48
CASC3-204ENST00000474190 WWC2Q6AWC2 1192 aa12.03□□□□□ -0.48
CASC3-204ENST00000474190 CCDC174Q6PII3 467 aa12.03□□□□□ -0.48
CASC3-204ENST00000474190 SYNE3Q6ZMZ3 975 aa12.03□□□□□ -0.48
CASC3-204ENST00000474190 RIOX2Q8IUF8 465 aa12.03□□□□□ -0.48
CASC3-204ENST00000474190 TBC1D5Q92609 795 aa12.03□□□□□ -0.48
CASC3-204ENST00000474190 ZSCAN31Q96LW9 406 aaPredicted RBP12.03□□□□□ -0.48
CASC3-204ENST00000474190 EFCC1Q9HA90 598 aa12.03□□□□□ -0.48
CASC3-204ENST00000474190 SH2B1Q9NRF2 756 aaPredicted RBP12.03□□□□□ -0.48
CASC3-204ENST00000474190 GPR25O00155 361 aa12.02□□□□□ -0.49
CASC3-204ENST00000474190 FDX1P10109 184 aa12.02□□□□□ -0.49
CASC3-204ENST00000474190 STAT3P40763 770 aa12.02□□□□□ -0.49
CASC3-204ENST00000474190 MCM2P49736 904 aa12.02□□□□□ -0.49
CASC3-204ENST00000474190 GHRHRQ02643 423 aa12.02□□□□□ -0.49
CASC3-204ENST00000474190 OTUD7BQ6GQQ9 843 aa12.02□□□□□ -0.49
CASC3-204ENST00000474190 SAMD1Q6SPF0 538 aaPredicted RBP12.02□□□□□ -0.49
CASC3-204ENST00000474190 GPRC5AQ8NFJ5 357 aa12.02□□□□□ -0.49
CASC3-204ENST00000474190 SMCR8Q8TEV9 937 aaPredicted RBP12.02□□□□□ -0.49
CASC3-204ENST00000474190 GTF3C2Q8WUA4 911 aaPredicted RBP12.02□□□□□ -0.49
CASC3-204ENST00000474190 PIBF1Q8WXW3 757 aa12.02□□□□□ -0.49
CASC3-204ENST00000474190 USP6NLQ92738 828 aa12.02□□□□□ -0.49
CASC3-204ENST00000474190 FGD4Q96M96 766 aa12.02□□□□□ -0.49
CASC3-204ENST00000474190 PAGR1Q9BTK6 254 aa12.02□□□□□ -0.49
CASC3-204ENST00000474190 TEX13BQ9BXU2 312 aa12.02□□□□□ -0.49
CASC3-204ENST00000474190 RNF26Q9BY78 433 aaPredicted RBP12.02□□□□□ -0.49
CASC3-204ENST00000474190 GJB4Q9NTQ9 266 aa12.02□□□□□ -0.49
CASC3-204ENST00000474190 GJD2Q9UKL4 321 aa12.02□□□□□ -0.49
CASC3-204ENST00000474190 NAP1L2Q9ULW6 460 aaPredicted RBP12.02□□□□□ -0.49
CASC3-204ENST00000474190 ASTN1O14525 1302 aa12.02□□□□□ -0.49
CASC3-204ENST00000474190 CCDC196A0A1B0GTZ2 297 aa12.01□□□□□ -0.49
CASC3-204ENST00000474190 PTPDC1A2A3K4 754 aa12.01□□□□□ -0.49
CASC3-204ENST00000474190 K7ELQ4 463 aaPredicted RBP12.01□□□□□ -0.49
CASC3-204ENST00000474190 STXBP3O00186 592 aa12.01□□□□□ -0.49
CASC3-204ENST00000474190 NFIBO00712 420 aa12.01□□□□□ -0.49
CASC3-204ENST00000474190 ZBED4O75132 1171 aa12.01□□□□□ -0.49
CASC3-204ENST00000474190 ERCC3P19447 782 aa12.01□□□□□ -0.49
CASC3-204ENST00000474190 LACTBP83111 547 aaPredicted RBP12.01□□□□□ -0.49
CASC3-204ENST00000474190 PFKFB3Q16875 520 aaPredicted RBP12.01□□□□□ -0.49
CASC3-204ENST00000474190 SNRNP48Q6IEG0 339 aaKnown RBP12.01□□□□□ -0.49
CASC3-204ENST00000474190 HOMER1Q86YM7 354 aa12.01□□□□□ -0.49
CASC3-204ENST00000474190 CPXCR1Q8N123 301 aa12.01□□□□□ -0.49
CASC3-204ENST00000474190 SHCBP1Q8NEM2 672 aa12.01□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms