RNA–Protein interactions for RNA: ENST00000474144.5

TMEM54-204, Transcript of transmembrane protein 54, humanhuman

TSL 3

Gene TMEM54, Length 748 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM54-204ENST00000474144 DCAF4Q8WV16 495 aa23.46■■□□□ 1.35
TMEM54-204ENST00000474144 FGD4Q96M96 766 aa23.46■■□□□ 1.35
TMEM54-204ENST00000474144 ZKSCAN3Q9BRR0 538 aa23.46■■□□□ 1.35
TMEM54-204ENST00000474144 RANBP2P49792 3224 aaKnown RBP23.46■■□□□ 1.35
TMEM54-204ENST00000474144 DNAH12Q6ZR08 3092 aa23.46■■□□□ 1.35
TMEM54-204ENST00000474144 SNAI1O95863 264 aaPredicted RBP23.45■■□□□ 1.34
TMEM54-204ENST00000474144 PCP11498 1178 aaKnown RBP23.45■■□□□ 1.34
TMEM54-204ENST00000474144 DSCC1Q9BVC3 393 aa23.45■■□□□ 1.34
TMEM54-204ENST00000474144 RNF41Q9H4P4 317 aaPredicted RBP23.45■■□□□ 1.34
TMEM54-204ENST00000474144 FBXO40Q9UH90 709 aa23.45■■□□□ 1.34
TMEM54-204ENST00000474144 NRBP1Q9UHY1 535 aa23.45■■□□□ 1.34
TMEM54-204ENST00000474144 ATN1P54259 1190 aaPredicted RBP23.44■■□□□ 1.34
TMEM54-204ENST00000474144 ARRDC4Q8NCT1 418 aa23.44■■□□□ 1.34
TMEM54-204ENST00000474144 LENG1Q96BZ8 264 aaPredicted RBP23.44■■□□□ 1.34
TMEM54-204ENST00000474144 ACAD9Q9H845 621 aa23.44■■□□□ 1.34
TMEM54-204ENST00000474144 GPCPD1Q9NPB8 672 aa23.44■■□□□ 1.34
TMEM54-204ENST00000474144 RNF146Q9NTX7 359 aa23.44■■□□□ 1.34
TMEM54-204ENST00000474144 ALAS1P13196 640 aa23.43■■□□□ 1.34
TMEM54-204ENST00000474144 LRRC41Q15345 812 aa23.43■■□□□ 1.34
TMEM54-204ENST00000474144 MAMDC4Q6UXC1 1216 aa23.43■■□□□ 1.34
TMEM54-204ENST00000474144 ESR2Q92731 530 aa23.43■■□□□ 1.34
TMEM54-204ENST00000474144 TRERF1Q96PN7 1200 aa23.43■■□□□ 1.34
TMEM54-204ENST00000474144 PDHBP11177 359 aa23.42■■□□□ 1.34
TMEM54-204ENST00000474144 CNTN2Q02246 1040 aa23.42■■□□□ 1.34
TMEM54-204ENST00000474144 MUM1L1Q5H9M0 696 aa23.42■■□□□ 1.34
TMEM54-204ENST00000474144 MSL3Q8N5Y2 521 aaKnown RBP23.42■■□□□ 1.34
TMEM54-204ENST00000474144 TTC14Q96N46 770 aa23.42■■□□□ 1.34
TMEM54-204ENST00000474144 A1CFQ9NQ94 594 aaKnown RBP23.42■■□□□ 1.34
TMEM54-204ENST00000474144 CNPY2Q9Y2B0 182 aa23.42■■□□□ 1.34
TMEM54-204ENST00000474144 SYNGAP1Q96PV0 1343 aa23.41■■□□□ 1.34
TMEM54-204ENST00000474144 B4E1Z4 1266 aa23.41■■□□□ 1.34
TMEM54-204ENST00000474144 KBTBD13C9JR72 458 aa23.41■■□□□ 1.34
TMEM54-204ENST00000474144 KDM4AO75164 1064 aa23.41■■□□□ 1.34
TMEM54-204ENST00000474144 PGK1P00558 417 aa23.41■■□□□ 1.34
TMEM54-204ENST00000474144 RARBP10826 455 aa23.41■■□□□ 1.34
TMEM54-204ENST00000474144 BTNL9Q6UXG8 535 aa23.41■■□□□ 1.34
TMEM54-204ENST00000474144 ZNF467Q7Z7K2 595 aaPredicted RBP23.41■■□□□ 1.34
TMEM54-204ENST00000474144 RANBP17Q9H2T7 1088 aaKnown RBP23.41■■□□□ 1.34
TMEM54-204ENST00000474144 XPNPEP3Q9NQH7 507 aa23.41■■□□□ 1.34
TMEM54-204ENST00000474144 MCM3APO60318 1980 aa23.41■■□□□ 1.34
TMEM54-204ENST00000474144 AKR1A1P14550 325 aa23.4■■□□□ 1.34
TMEM54-204ENST00000474144 IMMTQ16891 758 aaKnown RBP23.4■■□□□ 1.34
TMEM54-204ENST00000474144 TKFCQ3LXA3 575 aa23.4■■□□□ 1.34
TMEM54-204ENST00000474144 SYDE2Q5VT97 1194 aa23.4■■□□□ 1.34
TMEM54-204ENST00000474144 GDF15Q99988 308 aa23.4■■□□□ 1.34
TMEM54-204ENST00000474144 CDKN2AIPQ9NXV6 580 aaPredicted RBP23.4■■□□□ 1.34
TMEM54-204ENST00000474144 ZHX1Q9UKY1 873 aaPredicted RBP23.4■■□□□ 1.34
TMEM54-204ENST00000474144 CCPG1Q9ULG6 757 aa23.4■■□□□ 1.34
TMEM54-204ENST00000474144 CHMLP26374 656 aa23.39■■□□□ 1.33
TMEM54-204ENST00000474144 ADCYAP1R1P41586 468 aa23.39■■□□□ 1.33
TMEM54-204ENST00000474144 ARMCX2Q7L311 632 aa23.39■■□□□ 1.33
TMEM54-204ENST00000474144 FAM133AQ8N9E0 248 aa23.39■■□□□ 1.33
TMEM54-204ENST00000474144 FERMT2Q96AC1 680 aa23.39■■□□□ 1.33
TMEM54-204ENST00000474144 ZSWIM5Q9P217 1185 aa23.39■■□□□ 1.33
TMEM54-204ENST00000474144 CTNNA3Q9UI47 895 aa23.39■■□□□ 1.33
TMEM54-204ENST00000474144 SOWAHBA6NEL2 793 aa23.38■■□□□ 1.33
TMEM54-204ENST00000474144 POTEB2H3BUK9 544 aa23.38■■□□□ 1.33
TMEM54-204ENST00000474144 ICAM1P05362 532 aa23.38■■□□□ 1.33
TMEM54-204ENST00000474144 SNHG28P0DPA3 235 aa23.38■■□□□ 1.33
TMEM54-204ENST00000474144 MAGEA10P43363 369 aaPredicted RBP23.38■■□□□ 1.33
TMEM54-204ENST00000474144 RTP1P59025 263 aa23.38■■□□□ 1.33
TMEM54-204ENST00000474144 ZNF543Q08ER8 600 aa23.38■■□□□ 1.33
TMEM54-204ENST00000474144 ACVR2BQ13705 512 aa23.38■■□□□ 1.33
TMEM54-204ENST00000474144 SLC39A5Q6ZMH5 540 aa23.38■■□□□ 1.33
TMEM54-204ENST00000474144 DGKHQ86XP1 1220 aa23.38■■□□□ 1.33
TMEM54-204ENST00000474144 CCDC144CPQ8IYA2 1237 aa23.38■■□□□ 1.33
TMEM54-204ENST00000474144 DDX49Q9Y6V7 483 aaKnown RBP23.38■■□□□ 1.33
TMEM54-204ENST00000474144 ADCY6O43306 1168 aa23.37■■□□□ 1.33
TMEM54-204ENST00000474144 GOLGA8HP0CJ92 632 aa23.37■■□□□ 1.33
TMEM54-204ENST00000474144 PTH1RQ03431 593 aa23.37■■□□□ 1.33
TMEM54-204ENST00000474144 PURBQ96QR8 312 aaKnown RBP23.37■■□□□ 1.33
TMEM54-204ENST00000474144 FAM184BQ9ULE4 1060 aa23.37■■□□□ 1.33
TMEM54-204ENST00000474144 TRIOBPQ9H2D6 2365 aa23.37■■□□□ 1.33
TMEM54-204ENST00000474144 LCTP09848 1927 aa23.37■■□□□ 1.33
TMEM54-204ENST00000474144 ASTN1O14525 1302 aa23.36■■□□□ 1.33
TMEM54-204ENST00000474144 RAD50Q92878 1312 aa23.36■■□□□ 1.33
TMEM54-204ENST00000474144 SZT2Q5T011 3432 aa23.36■■□□□ 1.33
TMEM54-204ENST00000474144 ADAMTS4O75173 837 aa23.36■■□□□ 1.33
TMEM54-204ENST00000474144 IQCA1Q86XH1 822 aa23.36■■□□□ 1.33
TMEM54-204ENST00000474144 ZSCAN10Q96SZ4 725 aaPredicted RBP23.36■■□□□ 1.33
TMEM54-204ENST00000474144 KATNBL1Q9H079 304 aa23.36■■□□□ 1.33
TMEM54-204ENST00000474144 CPVLQ9H3G5 476 aa23.36■■□□□ 1.33
TMEM54-204ENST00000474144 CYP39A1Q9NYL5 469 aa23.36■■□□□ 1.33
TMEM54-204ENST00000474144 ATP11BQ9Y2G3 1177 aa23.36■■□□□ 1.33
TMEM54-204ENST00000474144 SYNRGQ9UMZ2 1314 aa23.35■■□□□ 1.33
TMEM54-204ENST00000474144 BMP8BP34820 402 aa23.35■■□□□ 1.33
TMEM54-204ENST00000474144 IRX5P78411 483 aaPredicted RBP23.35■■□□□ 1.33
TMEM54-204ENST00000474144 CCDC144BQ3MJ40 725 aa23.35■■□□□ 1.33
TMEM54-204ENST00000474144 TRIM60Q495X7 471 aa23.35■■□□□ 1.33
TMEM54-204ENST00000474144 NSMFQ6X4W1 530 aa23.35■■□□□ 1.33
TMEM54-204ENST00000474144 RNF180Q86T96 592 aa23.35■■□□□ 1.33
TMEM54-204ENST00000474144 ENAHQ8N8S7 591 aaPredicted RBP23.35■■□□□ 1.33
TMEM54-204ENST00000474144 PNMA1Q8ND90 353 aa23.35■■□□□ 1.33
TMEM54-204ENST00000474144 UBA5Q9GZZ9 404 aa23.35■■□□□ 1.33
TMEM54-204ENST00000474144 ABHD16BQ9H3Z7 469 aa23.35■■□□□ 1.33
TMEM54-204ENST00000474144 PHF24Q9UPV7 400 aa23.35■■□□□ 1.33
TMEM54-204ENST00000474144 TNKSO95271 1327 aa23.34■■□□□ 1.33
TMEM54-204ENST00000474144 MYADML2A6NDP7 307 aa23.34■■□□□ 1.33
TMEM54-204ENST00000474144 NFIBO00712 420 aa23.34■■□□□ 1.33
TMEM54-204ENST00000474144 MDM2Q00987 491 aaPredicted RBP23.34■■□□□ 1.33
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms