RNA–Protein interactions for RNA: ENST00000474048.1

PRPF38A-202, Transcript of pre-mRNA processing factor 38A, humanhuman

TSL 1 (best)

Gene PRPF38A, Length 1,059 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF38A-202ENST00000474048 PKN1Q16512 942 aa11.79□□□□□ -0.52
PRPF38A-202ENST00000474048 QRICH1Q2TAL8 776 aa11.79□□□□□ -0.52
PRPF38A-202ENST00000474048 USH1GQ495M9 461 aa11.79□□□□□ -0.52
PRPF38A-202ENST00000474048 WWC2Q6AWC2 1192 aa11.79□□□□□ -0.52
PRPF38A-202ENST00000474048 ATL3Q6DD88 541 aa11.79□□□□□ -0.52
PRPF38A-202ENST00000474048 OTUD7BQ6GQQ9 843 aa11.79□□□□□ -0.52
PRPF38A-202ENST00000474048 CCDC174Q6PII3 467 aa11.79□□□□□ -0.52
PRPF38A-202ENST00000474048 BTNL9Q6UXG8 535 aa11.79□□□□□ -0.52
PRPF38A-202ENST00000474048 PROCA1Q8NCQ7 364 aaPredicted RBP11.79□□□□□ -0.52
PRPF38A-202ENST00000474048 CLMNQ96JQ2 1002 aa11.79□□□□□ -0.52
PRPF38A-202ENST00000474048 FOXP1Q9H334 677 aaPredicted RBP11.79□□□□□ -0.52
PRPF38A-202ENST00000474048 PNMA3Q9UL41 463 aa11.79□□□□□ -0.52
PRPF38A-202ENST00000474048 PCDHA1Q9Y5I3 950 aa11.79□□□□□ -0.52
PRPF38A-202ENST00000474048 SMCO2A6NFE2 343 aa11.78□□□□□ -0.52
PRPF38A-202ENST00000474048 STXBP3O00186 592 aa11.78□□□□□ -0.52
PRPF38A-202ENST00000474048 GTF2A2P52657 109 aa11.78□□□□□ -0.52
PRPF38A-202ENST00000474048 HUNKP57058 714 aa11.78□□□□□ -0.52
PRPF38A-202ENST00000474048 KIF23Q02241 960 aaPredicted RBP11.78□□□□□ -0.52
PRPF38A-202ENST00000474048 RESTQ13127 1097 aa11.78□□□□□ -0.52
PRPF38A-202ENST00000474048 SH3D19Q5HYK7 790 aa11.78□□□□□ -0.52
PRPF38A-202ENST00000474048 MCTP2Q6DN12 878 aa11.78□□□□□ -0.52
PRPF38A-202ENST00000474048 PAXIP1Q6ZW49 1069 aaPredicted RBP11.78□□□□□ -0.52
PRPF38A-202ENST00000474048 NOSTRINQ8IVI9 506 aa11.78□□□□□ -0.52
PRPF38A-202ENST00000474048 BLIDQ8IZY5 108 aa11.78□□□□□ -0.52
PRPF38A-202ENST00000474048 REXO1Q8N1G1 1221 aaKnown RBP11.78□□□□□ -0.52
PRPF38A-202ENST00000474048 PHF20Q9BVI0 1012 aa11.78□□□□□ -0.52
PRPF38A-202ENST00000474048 EHMT1Q9H9B1 1298 aa11.78□□□□□ -0.52
PRPF38A-202ENST00000474048 EMILIN3Q9NT22 766 aa11.78□□□□□ -0.52
PRPF38A-202ENST00000474048 HOXC10Q9NYD6 342 aa11.78□□□□□ -0.52
PRPF38A-202ENST00000474048 ABT1Q9ULW3 272 aaKnown RBP11.78□□□□□ -0.52
PRPF38A-202ENST00000474048 PCDHA4Q9UN74 947 aa11.78□□□□□ -0.52
PRPF38A-202ENST00000474048 CEP131Q9UPN4 1083 aa11.78□□□□□ -0.52
PRPF38A-202ENST00000474048 ABCB11O95342 1321 aa11.78□□□□□ -0.52
PRPF38A-202ENST00000474048 SRCAPQ6ZRS2 3230 aa11.78□□□□□ -0.52
PRPF38A-202ENST00000474048 LOC285556D6RIA3 1793 aa11.77□□□□□ -0.52
PRPF38A-202ENST00000474048 A0A0G2JLL6 359 aaPredicted RBP11.77□□□□□ -0.53
PRPF38A-202ENST00000474048 ESYT2A0FGR8 921 aa11.77□□□□□ -0.53
PRPF38A-202ENST00000474048 IRF6O14896 467 aa11.77□□□□□ -0.53
PRPF38A-202ENST00000474048 FIBPO43427 364 aa11.77□□□□□ -0.53
PRPF38A-202ENST00000474048 BAG4O95429 457 aaKnown RBP11.77□□□□□ -0.53
PRPF38A-202ENST00000474048 CETPP11597 493 aa11.77□□□□□ -0.53
PRPF38A-202ENST00000474048 COG2Q14746 738 aa11.77□□□□□ -0.53
PRPF38A-202ENST00000474048 SF3A1Q15459 793 aaKnown RBP11.77□□□□□ -0.53
PRPF38A-202ENST00000474048 LDLRAD1Q5T700 205 aa11.77□□□□□ -0.53
PRPF38A-202ENST00000474048 KRT25Q7Z3Z0 450 aa11.77□□□□□ -0.53
PRPF38A-202ENST00000474048 PRRT2Q7Z6L0 340 aaPredicted RBP11.77□□□□□ -0.53
PRPF38A-202ENST00000474048 COA7Q96BR5 231 aa11.77□□□□□ -0.53
PRPF38A-202ENST00000474048 SCAND2PQ9GZW5 306 aaPredicted RBP11.77□□□□□ -0.53
PRPF38A-202ENST00000474048 CCPG1Q9ULG6 757 aa11.77□□□□□ -0.53
PRPF38A-202ENST00000474048 PPP1R9AQ9ULJ8 1098 aa11.77□□□□□ -0.53
PRPF38A-202ENST00000474048 MRPL11Q9Y3B7 192 aaKnown RBP11.77□□□□□ -0.53
PRPF38A-202ENST00000474048 PTPRFP10586 1907 aa11.77□□□□□ -0.53
PRPF38A-202ENST00000474048 MYPNQ86TC9 1320 aa11.77□□□□□ -0.53
PRPF38A-202ENST00000474048 TOMM70O94826 608 aa11.76□□□□□ -0.53
PRPF38A-202ENST00000474048 ZBTB48P10074 688 aaPredicted RBP11.76□□□□□ -0.53
PRPF38A-202ENST00000474048 ZNF157P51786 506 aaPredicted RBP11.76□□□□□ -0.53
PRPF38A-202ENST00000474048 PLS1Q14651 629 aa11.76□□□□□ -0.53
PRPF38A-202ENST00000474048 STK38Q15208 465 aa11.76□□□□□ -0.53
PRPF38A-202ENST00000474048 RILPL1Q5EBL4 403 aa11.76□□□□□ -0.53
PRPF38A-202ENST00000474048 KIAA1755Q5JYT7 1200 aa11.76□□□□□ -0.53
PRPF38A-202ENST00000474048 CPXCR1Q8N123 301 aa11.76□□□□□ -0.53
PRPF38A-202ENST00000474048 JMYQ8N9B5 988 aa11.76□□□□□ -0.53
PRPF38A-202ENST00000474048 DAGLBQ8NCG7 672 aa11.76□□□□□ -0.53
PRPF38A-202ENST00000474048 WNK4Q96J92 1243 aa11.76□□□□□ -0.53
PRPF38A-202ENST00000474048 SPATA32Q96LK8 384 aa11.76□□□□□ -0.53
PRPF38A-202ENST00000474048 ZMYND12Q9H0C1 365 aa11.76□□□□□ -0.53
PRPF38A-202ENST00000474048 RANBP17Q9H2T7 1088 aaKnown RBP11.76□□□□□ -0.53
PRPF38A-202ENST00000474048 PSTPIP2Q9H939 334 aa11.76□□□□□ -0.53
PRPF38A-202ENST00000474048 GJB4Q9NTQ9 266 aa11.76□□□□□ -0.53
PRPF38A-202ENST00000474048 FBXO28Q9NVF7 368 aa11.76□□□□□ -0.53
PRPF38A-202ENST00000474048 AGTPBP1Q9UPW5 1226 aa11.76□□□□□ -0.53
PRPF38A-202ENST00000474048 KCNH4Q9UQ05 1017 aa11.76□□□□□ -0.53
PRPF38A-202ENST00000474048 ZDHHC9Q9Y397 364 aa11.76□□□□□ -0.53
PRPF38A-202ENST00000474048 UTRNP46939 3433 aa11.76□□□□□ -0.53
PRPF38A-202ENST00000474048 CCL15-CCL14A0A0B4J2E2 113 aa11.75□□□□□ -0.53
PRPF38A-202ENST00000474048 SPDYE3A6NKU9 549 aa11.75□□□□□ -0.53
PRPF38A-202ENST00000474048 BTBD18B2RXH4 712 aa11.75□□□□□ -0.53
PRPF38A-202ENST00000474048 BMP15O95972 392 aa11.75□□□□□ -0.53
PRPF38A-202ENST00000474048 ICAM1P05362 532 aa11.75□□□□□ -0.53
PRPF38A-202ENST00000474048 U2AF2P26368 475 aaKnown RBP eCLIP11.75□□□□□ -0.532e-19■■■■■ 33.8
PRPF38A-202ENST00000474048 SNAP25P60880 206 aa11.75□□□□□ -0.53
PRPF38A-202ENST00000474048 DNM1Q05193 864 aaKnown RBP11.75□□□□□ -0.53
PRPF38A-202ENST00000474048 FMR1Q06787 632 aaKnown RBP eCLIP11.75□□□□□ -0.53
PRPF38A-202ENST00000474048 MKRN3Q13064 507 aaKnown RBP11.75□□□□□ -0.53
PRPF38A-202ENST00000474048 NONOQ15233 471 aaKnown RBP eCLIP11.75□□□□□ -0.53
PRPF38A-202ENST00000474048 CCL15Q16663 113 aa11.75□□□□□ -0.53
PRPF38A-202ENST00000474048 MYSM1Q5VVJ2 828 aa11.75□□□□□ -0.53
PRPF38A-202ENST00000474048 CATSPERGQ6ZRH7 1159 aa11.75□□□□□ -0.53
PRPF38A-202ENST00000474048 MCF2L2Q86YR7 1114 aa11.75□□□□□ -0.53
PRPF38A-202ENST00000474048 TEX2Q8IWB9 1127 aa11.75□□□□□ -0.53
PRPF38A-202ENST00000474048 MB21D1Q8N884 522 aa11.75□□□□□ -0.53
PRPF38A-202ENST00000474048 SMCR8Q8TEV9 937 aaPredicted RBP11.75□□□□□ -0.53
PRPF38A-202ENST00000474048 GTF3C2Q8WUA4 911 aaPredicted RBP11.75□□□□□ -0.53
PRPF38A-202ENST00000474048 MTMR8Q96EF0 704 aa11.75□□□□□ -0.53
PRPF38A-202ENST00000474048 RIC8AQ9NPQ8 531 aa11.75□□□□□ -0.53
PRPF38A-202ENST00000474048 RBBP6Q7Z6E9 1792 aaKnown RBP11.74□□□□□ -0.53
PRPF38A-202ENST00000474048 ITGBL1O95965 494 aaPredicted RBP11.74□□□□□ -0.53
PRPF38A-202ENST00000474048 ALAS1P13196 640 aa11.74□□□□□ -0.53
PRPF38A-202ENST00000474048 ATP2B1P20020 1258 aa11.74□□□□□ -0.53
PRPF38A-202ENST00000474048 DSG3P32926 999 aa11.74□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms