RNA–Protein interactions for RNA: ENST00000474025.1

SNRNP40-204, Transcript of small nuclear ribonucleoprotein U5 subunit 40, humanhuman

TSL 3

Gene SNRNP40, Length 581 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP40-204ENST00000474025 KCTD2Q14681 263 aa6.2□□□□□ -1.42
SNRNP40-204ENST00000474025 TTF1Q15361 905 aaPredicted RBP6.2□□□□□ -1.42
SNRNP40-204ENST00000474025 AAK1Q2M2I8 961 aa6.2□□□□□ -1.42
SNRNP40-204ENST00000474025 TMEM240Q5SV17 173 aa6.2□□□□□ -1.42
SNRNP40-204ENST00000474025 AKNAD1Q5T1N1 836 aa6.2□□□□□ -1.42
SNRNP40-204ENST00000474025 SLC9C2Q5TAH2 1124 aa6.2□□□□□ -1.42
SNRNP40-204ENST00000474025 CCSAPQ6IQ19 270 aaPredicted RBP6.2□□□□□ -1.42
SNRNP40-204ENST00000474025 MFSD5Q6N075 450 aa6.2□□□□□ -1.42
SNRNP40-204ENST00000474025 C16orf59Q7L2K0 433 aa6.2□□□□□ -1.42
SNRNP40-204ENST00000474025 AACSQ86V21 672 aa6.2□□□□□ -1.42
SNRNP40-204ENST00000474025 LCORLQ8N3X6 602 aa6.2□□□□□ -1.42
SNRNP40-204ENST00000474025 MSL3Q8N5Y2 521 aaKnown RBP6.2□□□□□ -1.42
SNRNP40-204ENST00000474025 NUP133Q8WUM0 1156 aa6.2□□□□□ -1.42
SNRNP40-204ENST00000474025 ASB2Q96Q27 587 aa6.2□□□□□ -1.42
SNRNP40-204ENST00000474025 GAS2L1Q99501 681 aaPredicted RBP6.2□□□□□ -1.42
SNRNP40-204ENST00000474025 PBX4Q9BYU1 374 aa6.2□□□□□ -1.42
SNRNP40-204ENST00000474025 PRDM12Q9H4Q4 367 aa6.2□□□□□ -1.42
SNRNP40-204ENST00000474025 THEGQ9P2T0 379 aa6.2□□□□□ -1.42
SNRNP40-204ENST00000474025 SWAP70Q9UH65 585 aa6.2□□□□□ -1.42
SNRNP40-204ENST00000474025 PPP1R9AQ9ULJ8 1098 aa6.2□□□□□ -1.42
SNRNP40-204ENST00000474025 USP34Q70CQ2 3546 aa6.2□□□□□ -1.42
SNRNP40-204ENST00000474025 ZNFX1Q9P2E3 1918 aaKnown RBP6.2□□□□□ -1.42
SNRNP40-204ENST00000474025 ELP1O95163 1332 aa6.2□□□□□ -1.42
SNRNP40-204ENST00000474025 MROH7Q68CQ1 1323 aa6.2□□□□□ -1.42
SNRNP40-204ENST00000474025 ZNF532Q9HCE3 1301 aa6.2□□□□□ -1.42
SNRNP40-204ENST00000474025 DNAJC25-GNG10A0A024R161 153 aa6.19□□□□□ -1.42
SNRNP40-204ENST00000474025 CYP2D7A0A087X1C5 515 aa6.19□□□□□ -1.42
SNRNP40-204ENST00000474025 ADCY6O43306 1168 aa6.19□□□□□ -1.42
SNRNP40-204ENST00000474025 DUSP11O75319 330 aaKnown RBP6.19□□□□□ -1.42
SNRNP40-204ENST00000474025 MBD4O95243 580 aa6.19□□□□□ -1.42
SNRNP40-204ENST00000474025 SNAI1O95863 264 aaPredicted RBP6.19□□□□□ -1.42
SNRNP40-204ENST00000474025 RLBP1P12271 317 aa6.19□□□□□ -1.42
SNRNP40-204ENST00000474025 EEF2P13639 858 aaKnown RBP6.19□□□□□ -1.42
SNRNP40-204ENST00000474025 CST5P28325 142 aaPredicted RBP6.19□□□□□ -1.42
SNRNP40-204ENST00000474025 COPB2P35606 906 aa6.19□□□□□ -1.42
SNRNP40-204ENST00000474025 STAT3P40763 770 aa6.19□□□□□ -1.42
SNRNP40-204ENST00000474025 CDK7P50613 346 aa6.19□□□□□ -1.42
SNRNP40-204ENST00000474025 ADGRE1Q14246 886 aa6.19□□□□□ -1.42
SNRNP40-204ENST00000474025 KCNA10Q16322 511 aa6.19□□□□□ -1.42
SNRNP40-204ENST00000474025 ZKSCAN2Q63HK3 967 aa6.19□□□□□ -1.42
SNRNP40-204ENST00000474025 CEP85Q6P2H3 762 aa6.19□□□□□ -1.42
SNRNP40-204ENST00000474025 CCDC174Q6PII3 467 aa6.19□□□□□ -1.42
SNRNP40-204ENST00000474025 MAMDC4Q6UXC1 1216 aa6.19□□□□□ -1.42
SNRNP40-204ENST00000474025 CCDC129Q6ZRS4 1044 aa6.19□□□□□ -1.42
SNRNP40-204ENST00000474025 C16orf86Q6ZW13 317 aa6.19□□□□□ -1.42
SNRNP40-204ENST00000474025 PLPP6Q8IY26 295 aa6.19□□□□□ -1.42
SNRNP40-204ENST00000474025 ADAMTS19Q8TE59 1207 aa6.19□□□□□ -1.42
SNRNP40-204ENST00000474025 PPM1EQ8WY54 764 aa6.19□□□□□ -1.42
SNRNP40-204ENST00000474025 RNF166Q96A37 237 aaPredicted RBP6.19□□□□□ -1.42
SNRNP40-204ENST00000474025 CCDC17Q96LX7 622 aa6.19□□□□□ -1.42
SNRNP40-204ENST00000474025 UHRF1Q96T88 793 aaPredicted RBP6.19□□□□□ -1.42
SNRNP40-204ENST00000474025 ARMT1Q9H993 441 aa6.19□□□□□ -1.42
SNRNP40-204ENST00000474025 CNPY2Q9Y2B0 182 aa6.19□□□□□ -1.42
SNRNP40-204ENST00000474025 EXOC6BQ9Y2D4 811 aa6.19□□□□□ -1.42
SNRNP40-204ENST00000474025 MYH8P13535 1937 aa6.19□□□□□ -1.42
SNRNP40-204ENST00000474025 CFAP54Q96N23 3096 aa6.18□□□□□ -1.42
SNRNP40-204ENST00000474025 ARVCFO00192 962 aa6.18□□□□□ -1.42
SNRNP40-204ENST00000474025 GOLIM4O00461 696 aa6.18□□□□□ -1.42
SNRNP40-204ENST00000474025 PRKAB2O43741 272 aa6.18□□□□□ -1.42
SNRNP40-204ENST00000474025 ASGR1P07306 291 aa6.18□□□□□ -1.42
SNRNP40-204ENST00000474025 ACRP10323 421 aa6.18□□□□□ -1.42
SNRNP40-204ENST00000474025 CSF2RAP15509 400 aa6.18□□□□□ -1.42
SNRNP40-204ENST00000474025 CDK8P49336 464 aa6.18□□□□□ -1.42
SNRNP40-204ENST00000474025 LSM11P83369 360 aaKnown RBP eCLIP6.18□□□□□ -1.42
SNRNP40-204ENST00000474025 ACVR2BQ13705 512 aa6.18□□□□□ -1.42
SNRNP40-204ENST00000474025 SLFNL1Q499Z3 407 aa6.18□□□□□ -1.42
SNRNP40-204ENST00000474025 FAM83BQ5T0W9 1011 aa6.18□□□□□ -1.42
SNRNP40-204ENST00000474025 C12orf60Q5U649 245 aa6.18□□□□□ -1.42
SNRNP40-204ENST00000474025 PSRC1Q6PGN9 363 aaPredicted RBP6.18□□□□□ -1.42
SNRNP40-204ENST00000474025 DHX30Q7L2E3 1194 aaKnown RBP eCLIP6.18□□□□□ -1.42
SNRNP40-204ENST00000474025 ERC1Q8IUD2 1116 aa6.18□□□□□ -1.42
SNRNP40-204ENST00000474025 ITPRIPQ8IWB1 547 aa6.18□□□□□ -1.42
SNRNP40-204ENST00000474025 FAM126BQ8IXS8 530 aa6.18□□□□□ -1.42
SNRNP40-204ENST00000474025 FTSJ3Q8IY81 847 aaKnown RBP6.18□□□□□ -1.42
SNRNP40-204ENST00000474025 SPRYD3Q8NCJ5 442 aa6.18□□□□□ -1.42
SNRNP40-204ENST00000474025 PPIL4Q8WUA2 492 aaKnown RBP eCLIP6.18□□□□□ -1.42
SNRNP40-204ENST00000474025 FGD4Q96M96 766 aa6.18□□□□□ -1.42
SNRNP40-204ENST00000474025 GLT1D1Q96MS3 346 aa6.18□□□□□ -1.42
SNRNP40-204ENST00000474025 DNAJC2Q99543 621 aaKnown RBP6.18□□□□□ -1.42
SNRNP40-204ENST00000474025 NUP88Q99567 741 aaPredicted RBP6.18□□□□□ -1.42
SNRNP40-204ENST00000474025 GNL3Q9BVP2 549 aaKnown RBP eCLIP6.18□□□□□ -1.42
SNRNP40-204ENST00000474025 TEX13BQ9BXU2 312 aa6.18□□□□□ -1.42
SNRNP40-204ENST00000474025 UPF3AQ9H1J1 476 aaKnown RBP6.18□□□□□ -1.42
SNRNP40-204ENST00000474025 KANSL2Q9H9L4 492 aa6.18□□□□□ -1.42
SNRNP40-204ENST00000474025 GOPCQ9HD26 462 aa6.18□□□□□ -1.42
SNRNP40-204ENST00000474025 IL1RAPL2Q9NP60 686 aa6.18□□□□□ -1.42
SNRNP40-204ENST00000474025 ATP8A2Q9NTI2 1148 aa6.18□□□□□ -1.42
SNRNP40-204ENST00000474025 CXXC1Q9P0U4 656 aaPredicted RBP6.18□□□□□ -1.42
SNRNP40-204ENST00000474025 DAXXQ9UER7 740 aaPredicted RBP6.18□□□□□ -1.42
SNRNP40-204ENST00000474025 ZHX1Q9UKY1 873 aaPredicted RBP6.18□□□□□ -1.42
SNRNP40-204ENST00000474025 FAM184BQ9ULE4 1060 aa6.18□□□□□ -1.42
SNRNP40-204ENST00000474025 RIPK3Q9Y572 518 aa6.18□□□□□ -1.42
SNRNP40-204ENST00000474025 BAZ2AQ9UIF9 1905 aaKnown RBP6.18□□□□□ -1.42
SNRNP40-204ENST00000474025 ZBED9Q6R2W3 1325 aa6.18□□□□□ -1.42
SNRNP40-204ENST00000474025 GREB1LQ9C091 1923 aaPredicted RBP6.17□□□□□ -1.42
SNRNP40-204ENST00000474025 A0A0U1RQG5 324 aaPredicted RBP6.17□□□□□ -1.42
SNRNP40-204ENST00000474025 USP17L12C9JPN9 530 aa6.17□□□□□ -1.42
SNRNP40-204ENST00000474025 USP17L21D6R901 530 aa6.17□□□□□ -1.42
SNRNP40-204ENST00000474025 APBB1O00213 710 aa6.17□□□□□ -1.42
SNRNP40-204ENST00000474025 ATP2A1O14983 1001 aa6.17□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms