RNA–Protein interactions for RNA: ENST00000474006.1

CCDC93-207, Transcript of coiled-coil domain containing 93, humanhuman

TSL 3

Gene CCDC93, Length 467 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC93-207ENST00000474006 PLIN4Q96Q06 1357 aa8.86□□□□□ -0.99
CCDC93-207ENST00000474006 TRIM75PA6NK02 468 aa8.85□□□□□ -0.99
CCDC93-207ENST00000474006 USP17L10C9JJH3 530 aa8.85□□□□□ -0.99
CCDC93-207ENST00000474006 ZBTB43O43298 467 aa8.85□□□□□ -0.99
CCDC93-207ENST00000474006 PFKFB2O60825 505 aa8.85□□□□□ -0.99
CCDC93-207ENST00000474006 GPR37L1O60883 481 aa8.85□□□□□ -0.99
CCDC93-207ENST00000474006 RXRAP19793 462 aa8.85□□□□□ -0.99
CCDC93-207ENST00000474006 APLP1P51693 650 aa8.85□□□□□ -0.99
CCDC93-207ENST00000474006 BACE1P56817 501 aa8.85□□□□□ -0.99
CCDC93-207ENST00000474006 HUNKP57058 714 aa8.85□□□□□ -0.99
CCDC93-207ENST00000474006 CCT2P78371 535 aaKnown RBP8.85□□□□□ -0.99
CCDC93-207ENST00000474006 PPATQ06203 517 aa8.85□□□□□ -0.99
CCDC93-207ENST00000474006 STK3Q13188 491 aa8.85□□□□□ -0.99
CCDC93-207ENST00000474006 KIAA1755Q5JYT7 1200 aa8.85□□□□□ -0.99
CCDC93-207ENST00000474006 SLFN13Q68D06 897 aa8.85□□□□□ -0.99
CCDC93-207ENST00000474006 APOA5Q6Q788 366 aa8.85□□□□□ -0.99
CCDC93-207ENST00000474006 SAPCD2Q86UD0 394 aa8.85□□□□□ -0.99
CCDC93-207ENST00000474006 RAB11FIP4Q86YS3 637 aa8.85□□□□□ -0.99
CCDC93-207ENST00000474006 ZNF654Q8IZM8 581 aa8.85□□□□□ -0.99
CCDC93-207ENST00000474006 LRRC47Q8N1G4 583 aaKnown RBP8.85□□□□□ -0.99
CCDC93-207ENST00000474006 NECAB1Q8N987 351 aa8.85□□□□□ -0.99
CCDC93-207ENST00000474006 FANCBQ8NB91 859 aa8.85□□□□□ -0.99
CCDC93-207ENST00000474006 PNMA1Q8ND90 353 aa8.85□□□□□ -0.99
CCDC93-207ENST00000474006 NUP133Q8WUM0 1156 aa8.85□□□□□ -0.99
CCDC93-207ENST00000474006 TSC1Q92574 1164 aa8.85□□□□□ -0.99
CCDC93-207ENST00000474006 WNT2BQ93097 391 aa8.85□□□□□ -0.99
CCDC93-207ENST00000474006 OPTNQ96CV9 577 aa8.85□□□□□ -0.99
CCDC93-207ENST00000474006 CCDC97Q96F63 343 aaPredicted RBP8.85□□□□□ -0.99
CCDC93-207ENST00000474006 TMX3Q96JJ7 454 aa8.85□□□□□ -0.99
CCDC93-207ENST00000474006 ZSCAN31Q96LW9 406 aaPredicted RBP8.85□□□□□ -0.99
CCDC93-207ENST00000474006 KIAA1683Q9H0B3 1180 aa8.85□□□□□ -0.99
CCDC93-207ENST00000474006 AS3MTQ9HBK9 375 aa8.85□□□□□ -0.99
CCDC93-207ENST00000474006 MTMR7Q9Y216 660 aa8.85□□□□□ -0.99
CCDC93-207ENST00000474006 TMEM88BA6NKF7 163 aa8.84□□□□□ -0.99
CCDC93-207ENST00000474006 GOLGA8BA8MQT2 603 aa8.84□□□□□ -0.99
CCDC93-207ENST00000474006 C19orf81C9J6K1 198 aa8.84□□□□□ -0.99
CCDC93-207ENST00000474006 CXCL11O14625 94 aa8.84□□□□□ -0.99
CCDC93-207ENST00000474006 LARGE1O95461 756 aa8.84□□□□□ -0.99
CCDC93-207ENST00000474006 CALM1P0DP23 149 aa8.84□□□□□ -0.99
CCDC93-207ENST00000474006 CALM2P0DP24 149 aa8.84□□□□□ -0.99
CCDC93-207ENST00000474006 CALM3P0DP25 149 aa8.84□□□□□ -0.99
CCDC93-207ENST00000474006 ADD1P35611 737 aaKnown RBP8.84□□□□□ -0.99
CCDC93-207ENST00000474006 ANP32AP39687 249 aaKnown RBP8.84□□□□□ -0.99
CCDC93-207ENST00000474006 IRF5Q13568 498 aa8.84□□□□□ -0.99
CCDC93-207ENST00000474006 ZYXQ15942 572 aaKnown RBP8.84□□□□□ -0.99
CCDC93-207ENST00000474006 BRICD5Q6PL45 260 aa8.84□□□□□ -0.99
CCDC93-207ENST00000474006 USP17L2Q6R6M4 530 aa8.84□□□□□ -0.99
CCDC93-207ENST00000474006 HSCBQ8IWL3 235 aa8.84□□□□□ -0.99
CCDC93-207ENST00000474006 CCDC144CPQ8IYA2 1237 aa8.84□□□□□ -0.99
CCDC93-207ENST00000474006 SPICE1Q8N0Z3 855 aa8.84□□□□□ -0.99
CCDC93-207ENST00000474006 GMCL1P1Q8NEA9 526 aa8.84□□□□□ -0.99
CCDC93-207ENST00000474006 MAP3K14Q99558 947 aa8.84□□□□□ -0.99
CCDC93-207ENST00000474006 SLKQ9H2G2 1235 aaPredicted RBP8.84□□□□□ -0.99
CCDC93-207ENST00000474006 SH2D4AQ9H788 454 aa8.84□□□□□ -0.99
CCDC93-207ENST00000474006 VCPKMTQ9H867 229 aa8.84□□□□□ -0.99
CCDC93-207ENST00000474006 SYNPO2Q9UMS6 1093 aa8.84□□□□□ -0.99
CCDC93-207ENST00000474006 TLL2Q9Y6L7 1015 aa8.84□□□□□ -0.99
CCDC93-207ENST00000474006 PALM3A6NDB9 673 aaPredicted RBP8.83□□□□□ -1
CCDC93-207ENST00000474006 GOLGA8AA7E2F4 631 aa8.83□□□□□ -1
CCDC93-207ENST00000474006 K7ELQ4 463 aaPredicted RBP8.83□□□□□ -1
CCDC93-207ENST00000474006 NR1I2O75469 434 aa8.83□□□□□ -1
CCDC93-207ENST00000474006 DDAH1O94760 285 aa8.83□□□□□ -1
CCDC93-207ENST00000474006 NDUFB10O96000 172 aa8.83□□□□□ -1
CCDC93-207ENST00000474006 PARP1P09874 1014 aaKnown RBP8.83□□□□□ -1
CCDC93-207ENST00000474006 SNHG28P0DPA3 235 aa8.83□□□□□ -1
CCDC93-207ENST00000474006 PDHBP11177 359 aa8.83□□□□□ -1
CCDC93-207ENST00000474006 CDC27P30260 824 aa8.83□□□□□ -1
CCDC93-207ENST00000474006 SLC1A4P43007 532 aa8.83□□□□□ -1
CCDC93-207ENST00000474006 METAP2P50579 478 aaKnown RBP eCLIP8.83□□□□□ -1
CCDC93-207ENST00000474006 ZNF157P51786 506 aaPredicted RBP8.83□□□□□ -1
CCDC93-207ENST00000474006 USP14P54578 494 aa8.83□□□□□ -1
CCDC93-207ENST00000474006 HMGCS2P54868 508 aa8.83□□□□□ -1
CCDC93-207ENST00000474006 SCRN1Q12765 414 aa8.83□□□□□ -1
CCDC93-207ENST00000474006 PPIL2Q13356 520 aa8.83□□□□□ -1
CCDC93-207ENST00000474006 DGKZQ13574 1117 aa8.83□□□□□ -1
CCDC93-207ENST00000474006 BECN1Q14457 450 aa8.83□□□□□ -1
CCDC93-207ENST00000474006 MICU3Q86XE3 530 aa8.83□□□□□ -1
CCDC93-207ENST00000474006 STAG2Q8N3U4 1231 aa8.83□□□□□ -1
CCDC93-207ENST00000474006 NUP88Q99567 741 aaPredicted RBP8.83□□□□□ -1
CCDC93-207ENST00000474006 FEZ1Q99689 392 aa8.83□□□□□ -1
CCDC93-207ENST00000474006 NCOA5Q9HCD5 579 aaKnown RBP8.83□□□□□ -1
CCDC93-207ENST00000474006 SH2B1Q9NRF2 756 aaPredicted RBP8.83□□□□□ -1
CCDC93-207ENST00000474006 MAD2L2Q9UI95 211 aa8.83□□□□□ -1
CCDC93-207ENST00000474006 ABT1Q9ULW3 272 aaKnown RBP8.83□□□□□ -1
CCDC93-207ENST00000474006 PCDHB3Q9Y5E6 796 aa8.83□□□□□ -1
CCDC93-207ENST00000474006 CCDC196A0A1B0GTZ2 297 aa8.82□□□□□ -1
CCDC93-207ENST00000474006 GOLGA8HP0CJ92 632 aa8.82□□□□□ -1
CCDC93-207ENST00000474006 BMP3P12645 472 aa8.82□□□□□ -1
CCDC93-207ENST00000474006 KIF5BP33176 963 aa8.82□□□□□ -1
CCDC93-207ENST00000474006 RCAN1P53805 252 aa8.82□□□□□ -1
CCDC93-207ENST00000474006 ZNF543Q08ER8 600 aa8.82□□□□□ -1
CCDC93-207ENST00000474006 GRM4Q14833 912 aa8.82□□□□□ -1
CCDC93-207ENST00000474006 PPP2R5BQ15173 497 aa8.82□□□□□ -1
CCDC93-207ENST00000474006 RTN1Q16799 776 aa8.82□□□□□ -1
CCDC93-207ENST00000474006 SPRYD7Q5W111 196 aa8.82□□□□□ -1
CCDC93-207ENST00000474006 TTBK2Q6IQ55 1244 aa8.82□□□□□ -1
CCDC93-207ENST00000474006 RGMBQ6NW40 437 aa8.82□□□□□ -1
CCDC93-207ENST00000474006 LYPD8Q6UX82 237 aa8.82□□□□□ -1
CCDC93-207ENST00000474006 RNF19BQ6ZMZ0 732 aa8.82□□□□□ -1
CCDC93-207ENST00000474006 KCTD1Q719H9 257 aa8.82□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms