RNA–Protein interactions for RNA: ENST00000473978.5

PCYT1A-214, Transcript of phosphate cytidylyltransferase 1, choline, alpha, humanhuman

TSL 1 (best)

Gene PCYT1A, Length 1,430 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCYT1A-214ENST00000473978 ASTN1O14525 1302 aa15.46■□□□□ 0.07
PCYT1A-214ENST00000473978 WDR46O15213 610 aaKnown RBP15.46■□□□□ 0.07
PCYT1A-214ENST00000473978 SRGAP3O43295 1099 aa15.46■□□□□ 0.07
PCYT1A-214ENST00000473978 ZNF467Q7Z7K2 595 aaPredicted RBP15.46■□□□□ 0.07
PCYT1A-214ENST00000473978 SCN5AQ14524 2016 aa15.46■□□□□ 0.07
PCYT1A-214ENST00000473978 C11orf97A0A1B0GVM6 126 aaPredicted RBP15.45■□□□□ 0.06
PCYT1A-214ENST00000473978 LCHNA4D1U4 455 aa15.45■□□□□ 0.06
PCYT1A-214ENST00000473978 KIF28PB7ZC32 967 aa15.45■□□□□ 0.06
PCYT1A-214ENST00000473978 CABYRO75952 493 aa15.45■□□□□ 0.06
PCYT1A-214ENST00000473978 ACTN1P12814 892 aa15.45■□□□□ 0.06
PCYT1A-214ENST00000473978 COPB2P35606 906 aa15.45■□□□□ 0.06
PCYT1A-214ENST00000473978 ZAP70P43403 619 aa15.45■□□□□ 0.06
PCYT1A-214ENST00000473978 TTC39AQ5SRH9 613 aa15.45■□□□□ 0.06
PCYT1A-214ENST00000473978 TMEM179Q6ZVK1 233 aa15.45■□□□□ 0.06
PCYT1A-214ENST00000473978 FGD4Q96M96 766 aa15.45■□□□□ 0.06
PCYT1A-214ENST00000473978 MCM3APO60318 1980 aa15.45■□□□□ 0.06
PCYT1A-214ENST00000473978 POLR3DP05423 398 aaPredicted RBP15.44■□□□□ 0.06
PCYT1A-214ENST00000473978 CYP2C9P11712 490 aa15.44■□□□□ 0.06
PCYT1A-214ENST00000473978 PSMC6P62333 389 aa15.44■□□□□ 0.06
PCYT1A-214ENST00000473978 IER5LQ5T953 404 aa15.44■□□□□ 0.06
PCYT1A-214ENST00000473978 MEIS3Q99687 375 aa15.44■□□□□ 0.06
PCYT1A-214ENST00000473978 KATNBL1Q9H079 304 aa15.44■□□□□ 0.06
PCYT1A-214ENST00000473978 SUGCTQ9HAC7 445 aa15.44■□□□□ 0.06
PCYT1A-214ENST00000473978 PPP1R9AQ9ULJ8 1098 aa15.44■□□□□ 0.06
PCYT1A-214ENST00000473978 RIPK3Q9Y572 518 aa15.44■□□□□ 0.06
PCYT1A-214ENST00000473978 IGSF3O75054 1194 aa15.43■□□□□ 0.06
PCYT1A-214ENST00000473978 PTGS1P23219 599 aa15.43■□□□□ 0.06
PCYT1A-214ENST00000473978 PTPN5P54829 565 aa15.43■□□□□ 0.06
PCYT1A-214ENST00000473978 ARMCX2Q7L311 632 aa15.43■□□□□ 0.06
PCYT1A-214ENST00000473978 SEZ6LQ9BYH1 1024 aa15.43■□□□□ 0.06
PCYT1A-214ENST00000473978 ALDH8A1Q9H2A2 487 aaPredicted RBP15.43■□□□□ 0.06
PCYT1A-214ENST00000473978 ARHGEF10LQ9HCE6 1279 aa15.43■□□□□ 0.06
PCYT1A-214ENST00000473978 HDAC5Q9UQL6 1122 aa15.43■□□□□ 0.06
PCYT1A-214ENST00000473978 TNFAIP2Q03169 654 aa15.43■□□□□ 0.06
PCYT1A-214ENST00000473978 ICA1Q05084 483 aa15.43■□□□□ 0.06
PCYT1A-214ENST00000473978 ZP2Q05996 745 aa15.43■□□□□ 0.06
PCYT1A-214ENST00000473978 FSCN1Q16658 493 aaKnown RBP15.43■□□□□ 0.06
PCYT1A-214ENST00000473978 NOL8Q76FK4 1167 aaKnown RBP15.43■□□□□ 0.06
PCYT1A-214ENST00000473978 CERS3Q8IU89 383 aa15.43■□□□□ 0.06
PCYT1A-214ENST00000473978 MAGEB6Q8N7X4 407 aa15.43■□□□□ 0.06
PCYT1A-214ENST00000473978 NEK9Q8TD19 979 aa15.43■□□□□ 0.06
PCYT1A-214ENST00000473978 SH2D4AQ9H788 454 aa15.43■□□□□ 0.06
PCYT1A-214ENST00000473978 TRMT13Q9NUP7 481 aaKnown RBP15.43■□□□□ 0.06
PCYT1A-214ENST00000473978 MTUS1Q9ULD2 1270 aa15.43■□□□□ 0.06
PCYT1A-214ENST00000473978 GNEQ9Y223 722 aaKnown RBP15.43■□□□□ 0.06
PCYT1A-214ENST00000473978 H3BQ06 376 aaPredicted RBP15.42■□□□□ 0.06
PCYT1A-214ENST00000473978 GFRA3O60609 400 aa15.42■□□□□ 0.06
PCYT1A-214ENST00000473978 IDH1O75874 414 aaKnown RBP15.42■□□□□ 0.06
PCYT1A-214ENST00000473978 PUS10Q3MIT2 529 aaKnown RBP15.42■□□□□ 0.06
PCYT1A-214ENST00000473978 CCDC158Q5M9N0 1113 aa15.42■□□□□ 0.06
PCYT1A-214ENST00000473978 SNRNP48Q6IEG0 339 aaKnown RBP15.42■□□□□ 0.06
PCYT1A-214ENST00000473978 TMCO2Q7Z6W1 182 aaPredicted RBP15.42■□□□□ 0.06
PCYT1A-214ENST00000473978 CCDC144CPQ8IYA2 1237 aa15.42■□□□□ 0.06
PCYT1A-214ENST00000473978 DBNDD2Q9BQY9 259 aa15.42■□□□□ 0.06
PCYT1A-214ENST00000473978 TEX13BQ9BXU2 312 aa15.42■□□□□ 0.06
PCYT1A-214ENST00000473978 PTPRZ1P23471 2315 aaPredicted RBP15.41■□□□□ 0.06
PCYT1A-214ENST00000473978 C19orf67A6NJJ6 358 aa15.41■□□□□ 0.06
PCYT1A-214ENST00000473978 AKR1B1P15121 316 aa15.41■□□□□ 0.06
PCYT1A-214ENST00000473978 TCF15Q12870 199 aa15.41■□□□□ 0.06
PCYT1A-214ENST00000473978 MTX1Q13505 466 aa15.41■□□□□ 0.06
PCYT1A-214ENST00000473978 TLK2Q86UE8 772 aa15.41■□□□□ 0.06
PCYT1A-214ENST00000473978 TECTAO75443 2155 aa15.4■□□□□ 0.06
PCYT1A-214ENST00000473978 PTPRSQ13332 1948 aa15.4■□□□□ 0.06
PCYT1A-214ENST00000473978 DYNC1LI2O43237 492 aaPredicted RBP15.4■□□□□ 0.06
PCYT1A-214ENST00000473978 SLC4A3P48751 1232 aa15.4■□□□□ 0.06
PCYT1A-214ENST00000473978 FAM83BQ5T0W9 1011 aa15.4■□□□□ 0.06
PCYT1A-214ENST00000473978 RIOK1Q9BRS2 568 aaKnown RBP15.4■□□□□ 0.06
PCYT1A-214ENST00000473978 FTOQ9C0B1 505 aaKnown RBP eCLIP15.4■□□□□ 0.06
PCYT1A-214ENST00000473978 TET1Q8NFU7 2136 aa15.4■□□□□ 0.06
PCYT1A-214ENST00000473978 CACNA1HO95180 2353 aa15.39■□□□□ 0.05
PCYT1A-214ENST00000473978 TNKSO95271 1327 aa15.39■□□□□ 0.05
PCYT1A-214ENST00000473978 ZEB2O60315 1214 aa15.39■□□□□ 0.05
PCYT1A-214ENST00000473978 IQCF3P0C7M6 154 aa15.39■□□□□ 0.05
PCYT1A-214ENST00000473978 SUPT20HL2P0C7V6 817 aa15.39■□□□□ 0.05
PCYT1A-214ENST00000473978 RFC2P35250 354 aa15.39■□□□□ 0.05
PCYT1A-214ENST00000473978 IRS1P35568 1242 aa15.39■□□□□ 0.05
PCYT1A-214ENST00000473978 AP5M1Q9H0R1 490 aa15.39■□□□□ 0.05
PCYT1A-214ENST00000473978 MCM9Q9NXL9 1143 aa15.39■□□□□ 0.05
PCYT1A-214ENST00000473978 VPS13AQ96RL7 3174 aa15.39■□□□□ 0.05
PCYT1A-214ENST00000473978 CYP2D6P10635 497 aa15.38■□□□□ 0.05
PCYT1A-214ENST00000473978 EEF2P13639 858 aaKnown RBP15.38■□□□□ 0.05
PCYT1A-214ENST00000473978 ERVK-21P61565 698 aa15.38■□□□□ 0.05
PCYT1A-214ENST00000473978 G3BP1Q13283 466 aaKnown RBP eCLIP15.38■□□□□ 0.05
PCYT1A-214ENST00000473978 ANKRD35Q8N283 1001 aa15.38■□□□□ 0.05
PCYT1A-214ENST00000473978 DYNLL2Q96FJ2 89 aa15.38■□□□□ 0.05
PCYT1A-214ENST00000473978 ZNF512BQ96KM6 892 aaPredicted RBP15.38■□□□□ 0.05
PCYT1A-214ENST00000473978 UPF3BQ9BZI7 483 aaKnown RBP15.38■□□□□ 0.05
PCYT1A-214ENST00000473978 FAM86C1Q9NVL1 165 aa15.38■□□□□ 0.05
PCYT1A-214ENST00000473978 PRKAG3Q9UGI9 489 aa15.38■□□□□ 0.05
PCYT1A-214ENST00000473978 MUTYHQ9UIF7 546 aa15.38■□□□□ 0.05
PCYT1A-214ENST00000473978 NAV1Q8NEY1 1877 aa15.37■□□□□ 0.05
PCYT1A-214ENST00000473978 BAIAP3O94812 1187 aa15.37■□□□□ 0.05
PCYT1A-214ENST00000473978 SMPD1P17405 629 aa15.37■□□□□ 0.05
PCYT1A-214ENST00000473978 TNNI3KQ59H18 835 aa15.37■□□□□ 0.05
PCYT1A-214ENST00000473978 TMEM63BQ5T3F8 832 aa15.37■□□□□ 0.05
PCYT1A-214ENST00000473978 DHX30Q7L2E3 1194 aaKnown RBP eCLIP15.37■□□□□ 0.05
PCYT1A-214ENST00000473978 ADHFE1Q8IWW8 467 aa15.37■□□□□ 0.05
PCYT1A-214ENST00000473978 CPXCR1Q8N123 301 aa15.37■□□□□ 0.05
PCYT1A-214ENST00000473978 TGS1Q96RS0 853 aaKnown RBP15.37■□□□□ 0.05
PCYT1A-214ENST00000473978 ZBED2Q9BTP6 218 aa15.37■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms