RNA–Protein interactions for RNA: ENST00000472756.1

VPS45-206, Transcript of vacuolar protein sorting 45 homolog, humanhuman

TSL 2

Gene VPS45, Length 352 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS45-206ENST00000472756 TMEM52Q8NDY8 209 aa3.75□□□□□ -1.81
VPS45-206ENST00000472756 FAM13CQ8NE31 585 aa3.75□□□□□ -1.81
VPS45-206ENST00000472756 DDX1Q92499 740 aaKnown RBP3.75□□□□□ -1.81
VPS45-206ENST00000472756 DVL3Q92997 716 aaPredicted RBP3.75□□□□□ -1.81
VPS45-206ENST00000472756 USTQ9Y2C2 406 aa3.75□□□□□ -1.81
VPS45-206ENST00000472756 DNMBPQ6XZF7 1577 aa3.75□□□□□ -1.81
VPS45-206ENST00000472756 PRDM2Q13029 1718 aa3.75□□□□□ -1.81
VPS45-206ENST00000472756 CARMIL1Q5VZK9 1371 aa3.75□□□□□ -1.81
VPS45-206ENST00000472756 ABCA10Q8WWZ4 1543 aa3.75□□□□□ -1.81
VPS45-206ENST00000472756 A0A1W2PQ45 241 aaPredicted RBP3.74□□□□□ -1.81
VPS45-206ENST00000472756 A0A1W2PQY0 241 aa3.74□□□□□ -1.81
VPS45-206ENST00000472756 ARID3CA6NKF2 412 aa3.74□□□□□ -1.81
VPS45-206ENST00000472756 NUDT19A8MXV4 375 aa3.74□□□□□ -1.81
VPS45-206ENST00000472756 PLATP00750 562 aa3.74□□□□□ -1.81
VPS45-206ENST00000472756 PRKCAP17252 672 aa3.74□□□□□ -1.81
VPS45-206ENST00000472756 PFKLP17858 780 aa3.74□□□□□ -1.81
VPS45-206ENST00000472756 TFE3P19532 575 aaPredicted RBP3.74□□□□□ -1.81
VPS45-206ENST00000472756 CLIP1P30622 1438 aa3.74□□□□□ -1.81
VPS45-206ENST00000472756 YARSP54577 528 aaKnown RBP3.74□□□□□ -1.81
VPS45-206ENST00000472756 PCBP3P57721 371 aaKnown RBP3.74□□□□□ -1.81
VPS45-206ENST00000472756 FMR1Q06787 632 aaKnown RBP eCLIP3.74□□□□□ -1.81
VPS45-206ENST00000472756 B4GALNT3Q6L9W6 998 aa3.74□□□□□ -1.81
VPS45-206ENST00000472756 ZNF747Q9BV97 191 aa3.74□□□□□ -1.81
VPS45-206ENST00000472756 RNF38Q9H0F5 515 aa3.74□□□□□ -1.81
VPS45-206ENST00000472756 PDS5BQ9NTI5 1447 aa3.74□□□□□ -1.81
VPS45-206ENST00000472756 ERVK13-1Q9NX77 482 aa3.74□□□□□ -1.81
VPS45-206ENST00000472756 GPR55Q9Y2T6 319 aaPredicted RBP3.74□□□□□ -1.81
VPS45-206ENST00000472756 TSC22D4Q9Y3Q8 395 aa3.74□□□□□ -1.81
VPS45-206ENST00000472756 ERICH3Q5RHP9 1530 aa3.74□□□□□ -1.81
VPS45-206ENST00000472756 TDRD9Q8NDG6 1382 aaKnown RBP3.74□□□□□ -1.81
VPS45-206ENST00000472756 ARAP1Q96P48 1450 aa3.73□□□□□ -1.81
VPS45-206ENST00000472756 FAM221AA4D161 298 aa3.73□□□□□ -1.81
VPS45-206ENST00000472756 SRGAP3O43295 1099 aa3.73□□□□□ -1.81
VPS45-206ENST00000472756 DNAJA2O60884 412 aa3.73□□□□□ -1.81
VPS45-206ENST00000472756 PLCG1P19174 1290 aa3.73□□□□□ -1.81
VPS45-206ENST00000472756 LIG3P49916 1009 aa3.73□□□□□ -1.81
VPS45-206ENST00000472756 CYP4F8P98187 520 aa3.73□□□□□ -1.81
VPS45-206ENST00000472756 MVKQ03426 396 aa3.73□□□□□ -1.81
VPS45-206ENST00000472756 ZC3H14Q6PJT7 736 aaKnown RBP3.73□□□□□ -1.81
VPS45-206ENST00000472756 TMC3Q7Z5M5 1100 aa3.73□□□□□ -1.81
VPS45-206ENST00000472756 ZNF761Q86XN6 746 aaPredicted RBP3.73□□□□□ -1.81
VPS45-206ENST00000472756 CCDC74BQ96LY2 380 aa3.73□□□□□ -1.81
VPS45-206ENST00000472756 SPATA6Q9NWH7 488 aaPredicted RBP3.73□□□□□ -1.81
VPS45-206ENST00000472756 DCTN4Q9UJW0 460 aa3.73□□□□□ -1.81
VPS45-206ENST00000472756 TAF6LQ9Y6J9 622 aa3.73□□□□□ -1.81
VPS45-206ENST00000472756 PMF1-BGLAPU3KQ54 211 aa3.73□□□□□ -1.81
VPS45-206ENST00000472756 ARHGAP35Q9NRY4 1499 aa3.73□□□□□ -1.81
VPS45-206ENST00000472756 KIF21AQ7Z4S6 1674 aa3.72□□□□□ -1.81
VPS45-206ENST00000472756 CHURC1-FNTBB4DL54 471 aa3.72□□□□□ -1.81
VPS45-206ENST00000472756 FZD7O75084 574 aa3.72□□□□□ -1.81
VPS45-206ENST00000472756 SYPP08247 313 aa3.72□□□□□ -1.81
VPS45-206ENST00000472756 RANGAP1P46060 587 aaPredicted RBP3.72□□□□□ -1.81
VPS45-206ENST00000472756 NBPF9Q3BBW0 867 aa3.72□□□□□ -1.81
VPS45-206ENST00000472756 B3GNT8Q7Z7M8 397 aa3.72□□□□□ -1.81
VPS45-206ENST00000472756 CCDC84Q86UT8 332 aaPredicted RBP3.72□□□□□ -1.81
VPS45-206ENST00000472756 MIR1-1HGQ9H1L0 117 aa3.72□□□□□ -1.81
VPS45-206ENST00000472756 WWC3Q9ULE0 1092 aa3.72□□□□□ -1.81
VPS45-206ENST00000472756 HCFC2Q9Y5Z7 792 aa3.72□□□□□ -1.81
VPS45-206ENST00000472756 TARBP1Q13395 1621 aaKnown RBP3.71□□□□□ -1.82
VPS45-206ENST00000472756 SOWAHDA6NJG2 315 aa3.71□□□□□ -1.82
VPS45-206ENST00000472756 UBOX5O94941 541 aa3.71□□□□□ -1.82
VPS45-206ENST00000472756 ZNF205O95201 554 aa3.71□□□□□ -1.82
VPS45-206ENST00000472756 DBHP09172 617 aa3.71□□□□□ -1.82
VPS45-206ENST00000472756 GJA9P57773 515 aa3.71□□□□□ -1.82
VPS45-206ENST00000472756 SNW1Q13573 536 aaKnown RBP3.71□□□□□ -1.82
VPS45-206ENST00000472756 ALG1LQ6GMV1 187 aa3.71□□□□□ -1.82
VPS45-206ENST00000472756 ZNF575Q86XF7 245 aa3.71□□□□□ -1.82
VPS45-206ENST00000472756 SH3RF3Q8TEJ3 882 aaPredicted RBP3.71□□□□□ -1.82
VPS45-206ENST00000472756 JMJD8Q96S16 334 aa3.71□□□□□ -1.82
VPS45-206ENST00000472756 CD248Q9HCU0 757 aa3.71□□□□□ -1.82
VPS45-206ENST00000472756 AQRO60306 1485 aaKnown RBP eCLIP3.71□□□□□ -1.82
VPS45-206ENST00000472756 MRC2Q9UBG0 1479 aa3.71□□□□□ -1.82
VPS45-206ENST00000472756 PCSK5Q92824 1860 aa3.71□□□□□ -1.82
VPS45-206ENST00000472756 TTBK1Q5TCY1 1321 aaPredicted RBP3.7□□□□□ -1.82
VPS45-206ENST00000472756 VPS8Q8N3P4 1428 aa3.7□□□□□ -1.82
VPS45-206ENST00000472756 ZNF608Q9ULD9 1512 aaPredicted RBP3.7□□□□□ -1.82
VPS45-206ENST00000472756 WDR97A6NE52 1622 aa3.7□□□□□ -1.82
VPS45-206ENST00000472756 RGS13O14921 159 aa3.7□□□□□ -1.82
VPS45-206ENST00000472756 FKTNO75072 461 aa3.7□□□□□ -1.82
VPS45-206ENST00000472756 CYBBP04839 570 aa3.7□□□□□ -1.82
VPS45-206ENST00000472756 NBPF12Q5TAG4 269 aaPredicted RBP3.7□□□□□ -1.82
VPS45-206ENST00000472756 PAQR3Q6TCH7 311 aa3.7□□□□□ -1.82
VPS45-206ENST00000472756 NUP43Q8NFH3 380 aa3.7□□□□□ -1.82
VPS45-206ENST00000472756 LOXL4Q96JB6 756 aa3.7□□□□□ -1.82
VPS45-206ENST00000472756 EAF1Q96JC9 268 aaPredicted RBP3.7□□□□□ -1.82
VPS45-206ENST00000472756 IMPACTQ9P2X3 320 aa3.7□□□□□ -1.82
VPS45-206ENST00000472756 REV1Q9UBZ9 1251 aa3.7□□□□□ -1.82
VPS45-206ENST00000472756 TTF2Q9UNY4 1162 aaKnown RBP3.7□□□□□ -1.82
VPS45-206ENST00000472756 SPG7Q9UQ90 795 aa3.7□□□□□ -1.82
VPS45-206ENST00000472756 ABCA5Q8WWZ7 1642 aa3.7□□□□□ -1.82
VPS45-206ENST00000472756 WDR62O43379 1518 aa3.7□□□□□ -1.82
VPS45-206ENST00000472756 LTBP3Q9NS15 1303 aa3.7□□□□□ -1.82
VPS45-206ENST00000472756 GAPVD1Q14C86 1478 aa3.69□□□□□ -1.82
VPS45-206ENST00000472756 SIGLEC6O43699 453 aa3.69□□□□□ -1.82
VPS45-206ENST00000472756 PRAMEF1O95521 474 aa3.69□□□□□ -1.82
VPS45-206ENST00000472756 ASGR2P07307 311 aa3.69□□□□□ -1.82
VPS45-206ENST00000472756 CTSKP43235 329 aa3.69□□□□□ -1.82
VPS45-206ENST00000472756 TNNI2P48788 182 aa3.69□□□□□ -1.82
VPS45-206ENST00000472756 KLF10Q13118 480 aa3.69□□□□□ -1.82
VPS45-206ENST00000472756 CCDC82Q8N4S0 544 aa3.69□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms